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The map label for this gene is 170077035

Identifier: 170077035

GI number: 170077035

Start: 428905

End: 429327

Strand: Direct

Name: 170077035

Synonym: SYNPCC7002_A0407

Alternate gene names: NA

Gene position: 428905-429327 (Clockwise)

Preceding gene: 170077034

Following gene: 170077050

Centisome position: 14.26

GC content: 45.86

Gene sequence:

>423_bases
GTGATCGGGATTGATACGAATATTTTGGCTCGGTTCTATGTCAATGATCCCAACGACCCAGAAGCAGAACAGCAAAGAAG
CCTCGCTTATAAAATTTTTACAGAATCAACTCGTTTGTTTGTGCCGCTCACTGTCATCCTAGAGTTGGAATGGGTGCTGC
GAGCGTTTTATGGTTTCCAACGGGAAGATTTTGCCCGGGTCATTCGACATTTATTAGGATTAGAGCATGTGATCGTCGAG
AGTTGGGAACGTGTTGATCTGGCTTTGCAGTGGCATTTACAAGGGCTGGATTTTGCTGATGCTCTCCATCTTGCGGCTAG
TCGGGAGTGCCAGAGTTTTGTGAGCTTTGATGATAAACGTTTTGCGAAACGTGTCCAACGACTGGGTCTTCAGCCTTCTG
TTGCGGTTCCAAAAAAACTTTGA

Upstream 100 bases:

>100_bases
CAGAGCAAGATAGACGAGGGATTTGGGATGTTGGTCTGTCCACCGACAACACCGAGGCGGCTCGATGATTTTGATATTGC
CCAAGCCATGAGGGAACAAC

Downstream 100 bases:

>100_bases
TCGTCGCTGTTTTCTGGTACTGACAGAGGCGATCGCCTACTATCGCTGTTAGCCTAAGATATTGCTTATTGTCTAAATCC
CCCGACAAAACTCACCTTTC

Product: nucleic acid-binding protein

Products: NA

Alternate protein names: PilT Protein-Like; PilT Protein-Like Protein; PIN Domain-Containing Protein; PilT Protein Domain Protein; PilT Domain-Containing Protein; PilT-Like Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIGIDTNILARFYVNDPNDPEAEQQRSLAYKIFTESTRLFVPLTVILELEWVLRAFYGFQREDFARVIRHLLGLEHVIVE
SWERVDLALQWHLQGLDFADALHLAASRECQSFVSFDDKRFAKRVQRLGLQPSVAVPKKL

Sequences:

>Translated_140_residues
MIGIDTNILARFYVNDPNDPEAEQQRSLAYKIFTESTRLFVPLTVILELEWVLRAFYGFQREDFARVIRHLLGLEHVIVE
SWERVDLALQWHLQGLDFADALHLAASRECQSFVSFDDKRFAKRVQRLGLQPSVAVPKKL
>Mature_140_residues
MIGIDTNILARFYVNDPNDPEAEQQRSLAYKIFTESTRLFVPLTVILELEWVLRAFYGFQREDFARVIRHLLGLEHVIVE
SWERVDLALQWHLQGLDFADALHLAASRECQSFVSFDDKRFAKRVQRLGLQPSVAVPKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16300; Mature: 16300

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIDTNILARFYVNDPNDPEAEQQRSLAYKIFTESTRLFVPLTVILELEWVLRAFYGFQ
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
REDFARVIRHLLGLEHVIVESWERVDLALQWHLQGLDFADALHLAASRECQSFVSFDDKR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCHHH
FAKRVQRLGLQPSVAVPKKL
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIGIDTNILARFYVNDPNDPEAEQQRSLAYKIFTESTRLFVPLTVILELEWVLRAFYGFQ
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
REDFARVIRHLLGLEHVIVESWERVDLALQWHLQGLDFADALHLAASRECQSFVSFDDKR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCHHH
FAKRVQRLGLQPSVAVPKKL
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA