| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077034
Identifier: 170077034
GI number: 170077034
Start: 428661
End: 428918
Strand: Direct
Name: 170077034
Synonym: SYNPCC7002_A0406
Alternate gene names: NA
Gene position: 428661-428918 (Clockwise)
Preceding gene: 170077030
Following gene: 170077035
Centisome position: 14.25
GC content: 49.22
Gene sequence:
>258_bases ATGAATACAGTGACGGTTTCCCACAAAGGTCAGGTTGTGATTCCGATTGAAATTCGCAAGCAACTGGGCATTAAGCCAGG TTGTAAGCTCTCATTTAGCTTGGATGGAGAGTCCATTCGCGTTGAACTGCAGCATCCCCAATGCCAGAGCAAGATAGACG AGGGATTTGGGATGTTGGTCTGTCCACCGACAACACCGAGGCGGCTCGATGATTTTGATATTGCCCAAGCCATGAGGGAA CAACGTGATCGGGATTGA
Upstream 100 bases:
>100_bases ACATAAAGGCGATCGCCTAATTATCTTCACAGGTTGGCACTATCTTCAACAGTATAGTTAGGCCTGTTACAATATTCTTA CTCAGTAAGACGATGAGCCG
Downstream 100 bases:
>100_bases TACGAATATTTTGGCTCGGTTCTATGTCAATGATCCCAACGACCCAGAAGCAGAACAGCAAAGAAGCCTCGCTTATAAAA TTTTTACAGAATCAACTCGT
Product: AbrB family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MNTVTVSHKGQVVIPIEIRKQLGIKPGCKLSFSLDGESIRVELQHPQCQSKIDEGFGMLVCPPTTPRRLDDFDIAQAMRE QRDRD
Sequences:
>Translated_85_residues MNTVTVSHKGQVVIPIEIRKQLGIKPGCKLSFSLDGESIRVELQHPQCQSKIDEGFGMLVCPPTTPRRLDDFDIAQAMRE QRDRD >Mature_85_residues MNTVTVSHKGQVVIPIEIRKQLGIKPGCKLSFSLDGESIRVELQHPQCQSKIDEGFGMLVCPPTTPRRLDDFDIAQAMRE QRDRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9606; Mature: 9606
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVTVSHKGQVVIPIEIRKQLGIKPGCKLSFSLDGESIRVELQHPQCQSKIDEGFGMLV CCEEECCCCCCEEEEEEEHHHCCCCCCCEEEEEECCCEEEEEEECCCHHHHHCCCCEEEE CPPTTPRRLDDFDIAQAMREQRDRD ECCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNTVTVSHKGQVVIPIEIRKQLGIKPGCKLSFSLDGESIRVELQHPQCQSKIDEGFGMLV CCEEECCCCCCEEEEEEEHHHCCCCCCCEEEEEECCCEEEEEEECCCHHHHHCCCCEEEE CPPTTPRRLDDFDIAQAMREQRDRD ECCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA