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The map label for this gene is ycjS [C]

Identifier: 170076942

GI number: 170076942

Start: 328141

End: 329286

Strand: Direct

Name: ycjS [C]

Synonym: SYNPCC7002_A0314

Alternate gene names: 170076942

Gene position: 328141-329286 (Clockwise)

Preceding gene: 170076941

Following gene: 170076945

Centisome position: 10.91

GC content: 53.75

Gene sequence:

>1146_bases
ATGACCCACGACACCATTGGGGTGGCGATCGCCGGCACCGGTTTTGGCCAAAAAATTCACATTCCCGGCCTCCAACACCA
CCACCGTACTGAAGTGGTCTCGGTTTACCATCGCGATCCGGACAAAGCCCAGGCGATCGCTGCCACCCATCAAATTGCCG
AAAGTGCCAGCGACTTTAATGCGCTTCTAGAAAATCCTGCCGTTGCCGCCGTTGCCATTTCGACGCCCCCTTTTTTGCAT
TATGAAATGGCCAAACAAGCTCTTCTAGCGGGGAAACATGTTTTATTAGAAAAACCCATGACCTTGAATGGGGCTGAGGC
GCGGGAGCTTTACCATCTGGCAGCCCAAAAAAATTTGGTCGTAACCCCGGACTTTGAATTTCGCTTTGTCCCTGCTTGGC
AATGTCTCGCGGAATATCTGCAACAGGGTTTTGTTGGTGAAAAACGCCTGATTACGATCAACTGGTTAGTGACCAGTCGA
GCCAACCCAGACCGACCTTGGAATTGGTATGCCCGCCAGGATCAAGGGGGTGGCGCTTTGGGGGCAGTGGGTTCCCATGC
CTTTGATTATGTCCATTGGTTGTTTGGCCCCGTGCAACGTTTGGCGGGTCATCTCAGTTGCGCCATTAAAGAGCGACCCG
ACCCCAAGGATGGCGATCGCCTTAAACCCGTAGATGCCGATGACACCTGCTTGATCATGCTAGAACTGGCCGACGGCACA
CCCTGTCAAATTAATATCACCTCCGTCAGTCACCATGGTCGGGGCCACTGGGTTGAAGTCTATGGCGATCGCGGTTCTCT
GGTTTTGGGAAGCAGCAACCTCAAGGATTATGTCCATGGTTTTACGCTCCAGGCGGGCCAGGCGGGTGAAGCACTGCAAC
CTGTGGCTATTCCAGAGCGCCTTGAATTTCCCCAAACCTTTGCCGATGGCCGCCTCGCGCCTTTTATTCGAGTTGTCGAT
CATTGGGTCAAAGCCATCGACCGCTGCCAGCAAAATCAAGGGATCTCCGAAGATCCAGTGGCGATCGCCCCAACGCTCCG
GGAAGGGGTCTATTCTCAATTGCTAATGGATTTAACCCACCAGGCCCATACCCAAGGCCGTTGGTTAACGGTGCCGGATC
TCGATACCTATCTCGATCTAGGCTGA

Upstream 100 bases:

>100_bases
GTTTGGCAAGCAGTGCGCCAGGGCTAGGCCAGAAAAATTTTGATTTTGCCCACCGCTGTTCTGGATAATGCGGAGGAAGA
TCATCGATTGAGGAGTTCCC

Downstream 100 bases:

>100_bases
CGCGGTTGGGGAGAAGTACGCCGTCCCTGGGGATTTTGGCCAGTCGCCTGGGGGGCTAACCCATTATTCGAGGATGGTGG
CGGTTGGAGTTGCCGCCGTC

Product: oxidoreductase (NAD-binding Rossmann fold)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTHDTIGVAIAGTGFGQKIHIPGLQHHHRTEVVSVYHRDPDKAQAIAATHQIAESASDFNALLENPAVAAVAISTPPFLH
YEMAKQALLAGKHVLLEKPMTLNGAEARELYHLAAQKNLVVTPDFEFRFVPAWQCLAEYLQQGFVGEKRLITINWLVTSR
ANPDRPWNWYARQDQGGGALGAVGSHAFDYVHWLFGPVQRLAGHLSCAIKERPDPKDGDRLKPVDADDTCLIMLELADGT
PCQINITSVSHHGRGHWVEVYGDRGSLVLGSSNLKDYVHGFTLQAGQAGEALQPVAIPERLEFPQTFADGRLAPFIRVVD
HWVKAIDRCQQNQGISEDPVAIAPTLREGVYSQLLMDLTHQAHTQGRWLTVPDLDTYLDLG

Sequences:

>Translated_381_residues
MTHDTIGVAIAGTGFGQKIHIPGLQHHHRTEVVSVYHRDPDKAQAIAATHQIAESASDFNALLENPAVAAVAISTPPFLH
YEMAKQALLAGKHVLLEKPMTLNGAEARELYHLAAQKNLVVTPDFEFRFVPAWQCLAEYLQQGFVGEKRLITINWLVTSR
ANPDRPWNWYARQDQGGGALGAVGSHAFDYVHWLFGPVQRLAGHLSCAIKERPDPKDGDRLKPVDADDTCLIMLELADGT
PCQINITSVSHHGRGHWVEVYGDRGSLVLGSSNLKDYVHGFTLQAGQAGEALQPVAIPERLEFPQTFADGRLAPFIRVVD
HWVKAIDRCQQNQGISEDPVAIAPTLREGVYSQLLMDLTHQAHTQGRWLTVPDLDTYLDLG
>Mature_380_residues
THDTIGVAIAGTGFGQKIHIPGLQHHHRTEVVSVYHRDPDKAQAIAATHQIAESASDFNALLENPAVAAVAISTPPFLHY
EMAKQALLAGKHVLLEKPMTLNGAEARELYHLAAQKNLVVTPDFEFRFVPAWQCLAEYLQQGFVGEKRLITINWLVTSRA
NPDRPWNWYARQDQGGGALGAVGSHAFDYVHWLFGPVQRLAGHLSCAIKERPDPKDGDRLKPVDADDTCLIMLELADGTP
CQINITSVSHHGRGHWVEVYGDRGSLVLGSSNLKDYVHGFTLQAGQAGEALQPVAIPERLEFPQTFADGRLAPFIRVVDH
WVKAIDRCQQNQGISEDPVAIAPTLREGVYSQLLMDLTHQAHTQGRWLTVPDLDTYLDLG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI226371727, Length=383, Percent_Identity=23.4986945169713, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI9506675, Length=371, Percent_Identity=22.6415094339623, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI7657212, Length=178, Percent_Identity=31.4606741573034, Blast_Score=72, Evalue=9e-13,
Organism=Escherichia coli, GI1787574, Length=198, Percent_Identity=31.3131313131313, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789848, Length=218, Percent_Identity=27.9816513761468, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI87081947, Length=194, Percent_Identity=28.3505154639175, Blast_Score=65, Evalue=6e-12,
Organism=Drosophila melanogaster, GI19920536, Length=370, Percent_Identity=27.027027027027, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24581115, Length=190, Percent_Identity=30.5263157894737, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42049; Mature: 41918

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDTIGVAIAGTGFGQKIHIPGLQHHHRTEVVSVYHRDPDKAQAIAATHQIAESASDFN
CCCCEEEEEEEECCCCCEEECCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHH
ALLENPAVAAVAISTPPFLHYEMAKQALLAGKHVLLEKPMTLNGAEARELYHLAAQKNLV
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCEE
VTPDFEFRFVPAWQCLAEYLQQGFVGEKRLITINWLVTSRANPDRPWNWYARQDQGGGAL
ECCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEE
GAVGSHAFDYVHWLFGPVQRLAGHLSCAIKERPDPKDGDRLKPVDADDTCLIMLELADGT
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
PCQINITSVSHHGRGHWVEVYGDRGSLVLGSSNLKDYVHGFTLQAGQAGEALQPVAIPER
CCEEEEEEECCCCCCCEEEEECCCCCEEECCCCHHHHHCCEEEECCCCCCCCCCCCCCHH
LEFPQTFADGRLAPFIRVVDHWVKAIDRCQQNQGISEDPVAIAPTLREGVYSQLLMDLTH
HCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHH
QAHTQGRWLTVPDLDTYLDLG
HHHCCCCEEECCCCHHHCCCC
>Mature Secondary Structure 
THDTIGVAIAGTGFGQKIHIPGLQHHHRTEVVSVYHRDPDKAQAIAATHQIAESASDFN
CCCEEEEEEEECCCCCEEECCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHH
ALLENPAVAAVAISTPPFLHYEMAKQALLAGKHVLLEKPMTLNGAEARELYHLAAQKNLV
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCEE
VTPDFEFRFVPAWQCLAEYLQQGFVGEKRLITINWLVTSRANPDRPWNWYARQDQGGGAL
ECCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEE
GAVGSHAFDYVHWLFGPVQRLAGHLSCAIKERPDPKDGDRLKPVDADDTCLIMLELADGT
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
PCQINITSVSHHGRGHWVEVYGDRGSLVLGSSNLKDYVHGFTLQAGQAGEALQPVAIPER
CCEEEEEEECCCCCCCEEEEECCCCCEEECCCCHHHHHCCEEEECCCCCCCCCCCCCCHH
LEFPQTFADGRLAPFIRVVDHWVKAIDRCQQNQGISEDPVAIAPTLREGVYSQLLMDLTH
HCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHH
QAHTQGRWLTVPDLDTYLDLG
HHHCCCCEEECCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]