| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is purC
Identifier: 170076945
GI number: 170076945
Start: 330570
End: 331322
Strand: Direct
Name: purC
Synonym: SYNPCC7002_A0317
Alternate gene names: 170076945
Gene position: 330570-331322 (Clockwise)
Preceding gene: 170076942
Following gene: 170076946
Centisome position: 10.99
GC content: 51.53
Gene sequence:
>753_bases ATGAGCGAGCACCACCCGGAAAAAAGATACGAAGGTAAGGCAAAAATTCTCTACAGCACCGCCGACTCTGATGTTCTCCT CACCTATTTTAAAGATGACGCCACCGCCTTTAATGCCCAGAAAAAAGGCACCATCCAGGGTAAAGGGGAAATGAACTGCA CCATTGCCGCTGCCCTCCTCCAATGGCTGGAAACCCAGGGTATTCCGACCCACTTTATCGAACAAACGAAAGCCGATGAA ATGCTCGTTAAAGCAGTTAAAATTCTGCCGGTAGAAGTGGTTGTGCGCAATATTGCGGCGGGTAGTCTTTGTAAACAAAC GGGTTTGGCCCAGGGCACAGTTCTCCCCCAACCCCTCGTGGAGTTTTATCTCAAGGATGATAACCTCGGTGATCCGCTCT TGACCCGCGATCGCCTTATGCTGCTTCAGATCGTCACCGCCGAGCAACTGGCCCAACTCCAGGACTATGCCCTGCGGATC AATGGTCTGATGCAAGGCTTTTTTGCGCGCTGTCAGATTACCCTGGTGGATTTTAAAATCGAGTTTGGCACCGACAAAAC AGGGACAATTCTTTTGGCCGACGAAATTAGTCCCGACACCTGCCGCCTGTGGGATCAAACCGAAACAGACCCCAACCTGC GGGTGATGGATAAAGACCGCTTCCGTCAAGACCTCGGTAACATCGAAAACGCTTATCAAACTGTCCAGGCCAGGGTCTTG GCCCAGGTGCAGCAATTGCAATCCCTCGCCTAA
Upstream 100 bases:
>100_bases GGCTTTATTGTGACATATTGTTTCCCCAAGCCCCTAGGCAAACCCAGGGACATCAGCCCCTACAATGGAGAATGATTTTA TCCACGATTTTAACCAGCTT
Downstream 100 bases:
>100_bases ATTTTCCCGACCCAAGGCTAAATTACGGGGTCTAGACATGGAAACATAAGCAACGCTTCCCCGTCTTCGACTCTGGTACA ATCCAGCAGAGTAAATTACT
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSEHHPEKRYEGKAKILYSTADSDVLLTYFKDDATAFNAQKKGTIQGKGEMNCTIAAALLQWLETQGIPTHFIEQTKADE MLVKAVKILPVEVVVRNIAAGSLCKQTGLAQGTVLPQPLVEFYLKDDNLGDPLLTRDRLMLLQIVTAEQLAQLQDYALRI NGLMQGFFARCQITLVDFKIEFGTDKTGTILLADEISPDTCRLWDQTETDPNLRVMDKDRFRQDLGNIENAYQTVQARVL AQVQQLQSLA
Sequences:
>Translated_250_residues MSEHHPEKRYEGKAKILYSTADSDVLLTYFKDDATAFNAQKKGTIQGKGEMNCTIAAALLQWLETQGIPTHFIEQTKADE MLVKAVKILPVEVVVRNIAAGSLCKQTGLAQGTVLPQPLVEFYLKDDNLGDPLLTRDRLMLLQIVTAEQLAQLQDYALRI NGLMQGFFARCQITLVDFKIEFGTDKTGTILLADEISPDTCRLWDQTETDPNLRVMDKDRFRQDLGNIENAYQTVQARVL AQVQQLQSLA >Mature_249_residues SEHHPEKRYEGKAKILYSTADSDVLLTYFKDDATAFNAQKKGTIQGKGEMNCTIAAALLQWLETQGIPTHFIEQTKADEM LVKAVKILPVEVVVRNIAAGSLCKQTGLAQGTVLPQPLVEFYLKDDNLGDPLLTRDRLMLLQIVTAEQLAQLQDYALRIN GLMQGFFARCQITLVDFKIEFGTDKTGTILLADEISPDTCRLWDQTETDPNLRVMDKDRFRQDLGNIENAYQTVQARVLA QVQQLQSLA
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Homo sapiens, GI119220557, Length=207, Percent_Identity=33.8164251207729, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI5453539, Length=207, Percent_Identity=33.8164251207729, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI119220559, Length=214, Percent_Identity=32.2429906542056, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1788820, Length=234, Percent_Identity=38.4615384615385, Blast_Score=163, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17531275, Length=220, Percent_Identity=30.4545454545455, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24583917, Length=249, Percent_Identity=27.710843373494, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI18860083, Length=248, Percent_Identity=26.2096774193548, Blast_Score=85, Evalue=4e-17,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR7_SYNP2 (B1XNE9)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001733583.1 - ProteinModelPortal: B1XNE9 - SMR: B1XNE9 - GeneID: 6056704 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A0317 - HOGENOM: HBG306070 - OMA: YKDDALG - ProtClustDB: PRK09362 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 28049; Mature: 27917
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHHPEKRYEGKAKILYSTADSDVLLTYFKDDATAFNAQKKGTIQGKGEMNCTIAAALL CCCCCCCHHCCCCEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCHHHHHHHH QWLETQGIPTHFIEQTKADEMLVKAVKILPVEVVVRNIAAGSLCKQTGLAQGTVLPQPLV HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH EFYLKDDNLGDPLLTRDRLMLLQIVTAEQLAQLQDYALRINGLMQGFFARCQITLVDFKI HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE EFGTDKTGTILLADEISPDTCRLWDQTETDPNLRVMDKDRFRQDLGNIENAYQTVQARVL EECCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH AQVQQLQSLA HHHHHHHHCC >Mature Secondary Structure SEHHPEKRYEGKAKILYSTADSDVLLTYFKDDATAFNAQKKGTIQGKGEMNCTIAAALL CCCCCCHHCCCCEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCHHHHHHHH QWLETQGIPTHFIEQTKADEMLVKAVKILPVEVVVRNIAAGSLCKQTGLAQGTVLPQPLV HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH EFYLKDDNLGDPLLTRDRLMLLQIVTAEQLAQLQDYALRINGLMQGFFARCQITLVDFKI HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE EFGTDKTGTILLADEISPDTCRLWDQTETDPNLRVMDKDRFRQDLGNIENAYQTVQARVL EECCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH AQVQQLQSLA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA