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The map label for this gene is psbL [H]

Identifier: 170076862

GI number: 170076862

Start: 241309

End: 241428

Strand: Direct

Name: psbL [H]

Synonym: SYNPCC7002_A0232

Alternate gene names: 170076862

Gene position: 241309-241428 (Clockwise)

Preceding gene: 170076861

Following gene: 170076863

Centisome position: 8.02

GC content: 39.17

Gene sequence:

>120_bases
ATGGAAAGAAATCAAAATCCCAACAGACAGCCTGTGGAACTAAACCGGACTTCTCTATATCTGGGTTTACTTCTAATCGC
TGTGCTCGGTATTCTATTTTCCAGCTACTTCTTTAACTAA

Upstream 100 bases:

>100_bases
TACCGTCCGTTGGTTGGCGGTGCACACCCTGGCTGTACCCTCGGTTTTCTTCCTAGGGGCGATCGCCGCTATGCAGTTTA
TTCAACGTTAGGAGCTTCCG

Downstream 100 bases:

>100_bases
GCTGGCAGCCCTTTAATTTCAGCCCTTTAATTTATTTTTTTCGGAGGTTGTTCTCATGTCTGAAGGCGGAAAAATCCCAC
TTTGGATCGTTGCAGTTGTC

Product: photosystem II reaction center L

Products: NA

Alternate protein names: PSII-L; PSII 5 kDa protein [H]

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
MERNQNPNRQPVELNRTSLYLGLLLIAVLGILFSSYFFN

Sequences:

>Translated_39_residues
MERNQNPNRQPVELNRTSLYLGLLLIAVLGILFSSYFFN
>Mature_39_residues
MERNQNPNRQPVELNRTSLYLGLLLIAVLGILFSSYFFN

Specific function: Required for PSII activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003372
- ProDom:   PD005113 [H]

Pfam domain/function: PF02419 PsbL [H]

EC number: NA

Molecular weight: Translated: 4542; Mature: 4542

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERNQNPNRQPVELNRTSLYLGLLLIAVLGILFSSYFFN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERNQNPNRQPVELNRTSLYLGLLLIAVLGILFSSYFFN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA