| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076850
Identifier: 170076850
GI number: 170076850
Start: 230673
End: 231209
Strand: Direct
Name: 170076850
Synonym: SYNPCC7002_A0219
Alternate gene names: NA
Gene position: 230673-231209 (Clockwise)
Preceding gene: 170076849
Following gene: 170076851
Centisome position: 7.67
GC content: 51.77
Gene sequence:
>537_bases ATGTCTTTTACTTCCCGTCTTTGTCTGGCTCTCTGTGGCACCGTCTTGGTTGGGTGTGTCCCATTTCCGGTTGATGATTC TGGCCTCAGTACGCCTCCCAGTGAGACCCCGGTGAGCCAATCCGCCCCCAGACCCCAGGGGCAAATGCTCTCGATTACGG CAACGGCCAAGATCATCGGATCGGAGCAACGGTTTGGGTTAGAGGTTGCAGAAACCGCCGAACAACAGCGGTTAGGACTG ATGTATCGGGAATTTTTACCGGATAATCGGGGGATGTTATTTGAGTTTGATCCCGCCCGCCCAGTCAGTTTTTGGATGAA AAATTGCTTGATCAATCTGGATATGATTTTTCTCCGGGAGGGAGTCGTGCAGGCGATCGCCCATGATGTCCCCCCTTGTG AAAATGATCCTTGTCCTACTTATGGGCCGCCAACGACCGTCAATATTGATCAAGTGATTGAAATTCGGGGCGGTTTGGCG AAGGAAATTAACCTCCAAGCAGGCGATCGCATCGAGGTCACCAAGACCAACGAATAA
Upstream 100 bases:
>100_bases AAACTGTGCGGGGAGTCGGTTATGTCCTCAAAAAAGATCCCTAGGTTTTAAAATGCGTTCCAAATGCCTCCCTTCGATCT CCACCATTTAACTAAGCACC
Downstream 100 bases:
>100_bases TGAAATCCCCATCGTCAAGTTGTGTGCATTGATCTGTTAAGAACTAGATGAACTACAGCCCCCGGATCCAAGATATTCCC GCTAGCGAACGACCGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSFTSRLCLALCGTVLVGCVPFPVDDSGLSTPPSETPVSQSAPRPQGQMLSITATAKIIGSEQRFGLEVAETAEQQRLGL MYREFLPDNRGMLFEFDPARPVSFWMKNCLINLDMIFLREGVVQAIAHDVPPCENDPCPTYGPPTTVNIDQVIEIRGGLA KEINLQAGDRIEVTKTNE
Sequences:
>Translated_178_residues MSFTSRLCLALCGTVLVGCVPFPVDDSGLSTPPSETPVSQSAPRPQGQMLSITATAKIIGSEQRFGLEVAETAEQQRLGL MYREFLPDNRGMLFEFDPARPVSFWMKNCLINLDMIFLREGVVQAIAHDVPPCENDPCPTYGPPTTVNIDQVIEIRGGLA KEINLQAGDRIEVTKTNE >Mature_177_residues SFTSRLCLALCGTVLVGCVPFPVDDSGLSTPPSETPVSQSAPRPQGQMLSITATAKIIGSEQRFGLEVAETAEQQRLGLM YREFLPDNRGMLFEFDPARPVSFWMKNCLINLDMIFLREGVVQAIAHDVPPCENDPCPTYGPPTTVNIDQVIEIRGGLAK EINLQAGDRIEVTKTNE
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19498; Mature: 19366
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTSRLCLALCGTVLVGCVPFPVDDSGLSTPPSETPVSQSAPRPQGQMLSITATAKIIG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHEEECC SEQRFGLEVAETAEQQRLGLMYREFLPDNRGMLFEFDPARPVSFWMKNCLINLDMIFLRE CCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH GVVQAIAHDVPPCENDPCPTYGPPTTVNIDQVIEIRGGLAKEINLQAGDRIEVTKTNE HHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEECCCCCEEEEEECCC >Mature Secondary Structure SFTSRLCLALCGTVLVGCVPFPVDDSGLSTPPSETPVSQSAPRPQGQMLSITATAKIIG CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHEEECC SEQRFGLEVAETAEQQRLGLMYREFLPDNRGMLFEFDPARPVSFWMKNCLINLDMIFLRE CCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH GVVQAIAHDVPPCENDPCPTYGPPTTVNIDQVIEIRGGLAKEINLQAGDRIEVTKTNE HHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA