| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is por [H]
Identifier: 170076841
GI number: 170076841
Start: 218881
End: 219849
Strand: Direct
Name: por [H]
Synonym: SYNPCC7002_A0210
Alternate gene names: 170076841
Gene position: 218881-219849 (Clockwise)
Preceding gene: 170076840
Following gene: 170076843
Centisome position: 7.28
GC content: 51.29
Gene sequence:
>969_bases ATGACAGATCAACAAAAAACAGCGATCATTACTGGTGCCTCGTCCGGGGTCGGACTCTATGGGGCCAAAGCCCTCGCCGA TAAAGGCTGGCATGTGGTCATGGCCTGCCGCAACCTCGAAAAAACCGAGCGAGTCGCCAAAGAAGTTGGTATCCCCGAAG CCAGTCGGACGATCATGCACCTTGATCTCGCTGATTTCGATAGCGTCCGTAAATTCGTCGCCGATTTTCGGGCAACGGGT AAAACCCTAAACTCCCTAGTTTGTAATGCGGCGGTTTATCTGCCCCTCGCCAAGGAACCCCAACGCAACAAAGACGGTTA TGAACTTTGCGTTGCCACCAACCATTTGGGTCATTTCCTGCTCTGCAATTTGATGTTGGAAGACCTCAAAAATTCCCCCG CTGCAGACAAACGCCTTGTGATTCTCGGCACTGTCACCGCGAACCCGAAAGAAGTAGGCGGTAAAATTCCCATTCCTGCG CCCCCCGACCTTGGCGATCTCCAGGGAATGGCCGCTGGCTTTAAGCCCCCTGTTGCCATGATCGACGGCAAAATCTTTAA ACCCGGTAAAGCTTACAAAGACAGCAAACTCTGCAATATTCTCACCATGCGGGAACTCCACAACCGCTATCACAAAGACA CTGGGATTATCTTCAATTCTTTCTATCCGGGTTGCGTTGCCGAAACGGGCCTCTTTAGAAATCACTATGGTCTGTTCCGG AAGATCTTCCCCTGGTTCCAAAAAAATATCACCGGGGGTTATGTCACTGAAGAAGTGGCCGGAGAACGTCTCGCTAAAGT TGTTGCGGATTCTGGCTTCGATGTATCGGGTGTTTACTGGAGTTGGGGGAACCGCCAACAGCAAGGACGGGAAGCCTTTA TGCAAGAAGTTTCTGATGAAGCTCTCGATGACAACAAAGCAGATGTCCTTTGGGATCTCAGCGCCAAGTTAGTGGGGATG CCGGCCTAA
Upstream 100 bases:
>100_bases AATTCCCCCCGACGAATTCCCCTGAAATTAAGGGAAAAGAACGATAGTAAGATTTTCAACAAGCAGTTAACGTGATGAAT TTCCGCCAAAGCATAGAATC
Downstream 100 bases:
>100_bases TTTTTATCCTGATTCCTAATTCCTTAAGAGAGCAATTTTATTCTTATCGTCTCCCATCAAGGGAGATTTTTTTTGCCTCA TGTGTAGCGTTTCTTTTTGA
Product: protochlorophyllide oxidoreductase
Products: NA
Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTDQQKTAIITGASSGVGLYGAKALADKGWHVVMACRNLEKTERVAKEVGIPEASRTIMHLDLADFDSVRKFVADFRATG KTLNSLVCNAAVYLPLAKEPQRNKDGYELCVATNHLGHFLLCNLMLEDLKNSPAADKRLVILGTVTANPKEVGGKIPIPA PPDLGDLQGMAAGFKPPVAMIDGKIFKPGKAYKDSKLCNILTMRELHNRYHKDTGIIFNSFYPGCVAETGLFRNHYGLFR KIFPWFQKNITGGYVTEEVAGERLAKVVADSGFDVSGVYWSWGNRQQQGREAFMQEVSDEALDDNKADVLWDLSAKLVGM PA
Sequences:
>Translated_322_residues MTDQQKTAIITGASSGVGLYGAKALADKGWHVVMACRNLEKTERVAKEVGIPEASRTIMHLDLADFDSVRKFVADFRATG KTLNSLVCNAAVYLPLAKEPQRNKDGYELCVATNHLGHFLLCNLMLEDLKNSPAADKRLVILGTVTANPKEVGGKIPIPA PPDLGDLQGMAAGFKPPVAMIDGKIFKPGKAYKDSKLCNILTMRELHNRYHKDTGIIFNSFYPGCVAETGLFRNHYGLFR KIFPWFQKNITGGYVTEEVAGERLAKVVADSGFDVSGVYWSWGNRQQQGREAFMQEVSDEALDDNKADVLWDLSAKLVGM PA >Mature_321_residues TDQQKTAIITGASSGVGLYGAKALADKGWHVVMACRNLEKTERVAKEVGIPEASRTIMHLDLADFDSVRKFVADFRATGK TLNSLVCNAAVYLPLAKEPQRNKDGYELCVATNHLGHFLLCNLMLEDLKNSPAADKRLVILGTVTANPKEVGGKIPIPAP PDLGDLQGMAAGFKPPVAMIDGKIFKPGKAYKDSKLCNILTMRELHNRYHKDTGIIFNSFYPGCVAETGLFRNHYGLFRK IFPWFQKNITGGYVTEEVAGERLAKVVADSGFDVSGVYWSWGNRQQQGREAFMQEVSDEALDDNKADVLWDLSAKLVGMP A
Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]
Homologues:
Organism=Homo sapiens, GI166795268, Length=323, Percent_Identity=33.1269349845201, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI7706523, Length=323, Percent_Identity=30.9597523219814, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI186928839, Length=320, Percent_Identity=33.125, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI225579078, Length=326, Percent_Identity=32.5153374233129, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI146231950, Length=323, Percent_Identity=29.1021671826625, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI10190746, Length=333, Percent_Identity=30.6306306306306, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI193804850, Length=250, Percent_Identity=29.6, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI19923931, Length=294, Percent_Identity=30.952380952381, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17532791, Length=323, Percent_Identity=29.7213622291022, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI193207620, Length=326, Percent_Identity=28.2208588957055, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17532805, Length=322, Percent_Identity=30.4347826086957, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71992402, Length=313, Percent_Identity=28.7539936102236, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI72001364, Length=318, Percent_Identity=30.8176100628931, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17558006, Length=251, Percent_Identity=28.6852589641434, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI32565532, Length=237, Percent_Identity=29.535864978903, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17535059, Length=240, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553409, Length=321, Percent_Identity=32.398753894081, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24647948, Length=321, Percent_Identity=32.398753894081, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24647946, Length=321, Percent_Identity=32.398753894081, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI22024069, Length=325, Percent_Identity=32, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI24586328, Length=317, Percent_Identity=31.8611987381703, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI161076371, Length=232, Percent_Identity=35.3448275862069, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI20129347, Length=322, Percent_Identity=27.639751552795, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI19921754, Length=321, Percent_Identity=29.2834890965732, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI28573296, Length=323, Percent_Identity=29.7213622291022, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI45554248, Length=236, Percent_Identity=33.8983050847458, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24640117, Length=236, Percent_Identity=33.8983050847458, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24647931, Length=276, Percent_Identity=28.9855072463768, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR005979 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.33 [H]
Molecular weight: Translated: 35369; Mature: 35238
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQQKTAIITGASSGVGLYGAKALADKGWHVVMACRNLEKTERVAKEVGIPEASRTIMH CCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHCCCCHHCEEEE LDLADFDSVRKFVADFRATGKTLNSLVCNAAVYLPLAKEPQRNKDGYELCVATNHLGHFL EEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECHHHHHH LCNLMLEDLKNSPAADKRLVILGTVTANPKEVGGKIPIPAPPDLGDLQGMAAGFKPPVAM HHHHHHHHHCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHH IDGKIFKPGKAYKDSKLCNILTMRELHNRYHKDTGIIFNSFYPGCVAETGLFRNHYGLFR HCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHH KIFPWFQKNITGGYVTEEVAGERLAKVVADSGFDVSGVYWSWGNRQQQGREAFMQEVSDE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH ALDDNKADVLWDLSAKLVGMPA HCCCCCCEEEEECCHHHCCCCC >Mature Secondary Structure TDQQKTAIITGASSGVGLYGAKALADKGWHVVMACRNLEKTERVAKEVGIPEASRTIMH CCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHCCCCHHCEEEE LDLADFDSVRKFVADFRATGKTLNSLVCNAAVYLPLAKEPQRNKDGYELCVATNHLGHFL EEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECHHHHHH LCNLMLEDLKNSPAADKRLVILGTVTANPKEVGGKIPIPAPPDLGDLQGMAAGFKPPVAM HHHHHHHHHCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHH IDGKIFKPGKAYKDSKLCNILTMRELHNRYHKDTGIIFNSFYPGCVAETGLFRNHYGLFR HCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHH KIFPWFQKNITGGYVTEEVAGERLAKVVADSGFDVSGVYWSWGNRQQQGREAFMQEVSDE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH ALDDNKADVLWDLSAKLVGMPA HCCCCCCEEEEECCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7731978; 8590279; 8905231 [H]