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The map label for this gene is dtd

Identifier: 170076840

GI number: 170076840

Start: 218123

End: 218578

Strand: Direct

Name: dtd

Synonym: SYNPCC7002_A0209

Alternate gene names: 170076840

Gene position: 218123-218578 (Clockwise)

Preceding gene: 170076837

Following gene: 170076841

Centisome position: 7.25

GC content: 52.63

Gene sequence:

>456_bases
ATGAAAATTGTTCTCCAACGGGTGCAACAATCCCACGTCAGCGTCAATCAGCACATTGTCGGCCAAATTAACCAAGGCTT
AACGCTCCTTGTCGGCATTTCCCCCACCGACACCGACGCCGAATTACAGTGGCTCGCCCGCAAATGCCTTGATCTGCGCC
TCTTTCCGGATCCTGAGGGCAATCCCTGGCAAGCCTCGATCCAAGATATCCAGGGGGAAATCCTTGTGGTTAGTCAATTT
ACCCTCTATGGCGACTGTCGTAAGGGCCGACGACCATCCTTTAGTGGTTCTGCCAAACCAGATCAAGCCGAACAGATTTA
CGAAAAATTTGTGGCTTTCTTGCGCCAAAGTGGGCTGAAGATCGAAACCGGACAATTTGGTGCCATGATGCAGGTGGAAA
TCAGCAACGATGGCCCCGTGACCCTCCTCCTAGAGCGCGAAGCTAAACCCGCCTGA

Upstream 100 bases:

>100_bases
CGCCCACAAAGGCCCCACCATTTCGCTCAGCCATATTGAAGTTCTCCCATTACACAAATCGCCTCCATTGTAGTATTCAA
CCCGGCTTCTACTAAAACCG

Downstream 100 bases:

>100_bases
ACTGGCCCTAAATTTCAGTAAAGTTTTCCCCCAGGTTTTTACGAGAAATATGGCTTTGTAAAGCAGTGGGCAATATTGAG
ATACAAATATTAAAAGTTTG

Product: D-tyrosyl-tRNA(Tyr) deacylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKIVLQRVQQSHVSVNQHIVGQINQGLTLLVGISPTDTDAELQWLARKCLDLRLFPDPEGNPWQASIQDIQGEILVVSQF
TLYGDCRKGRRPSFSGSAKPDQAEQIYEKFVAFLRQSGLKIETGQFGAMMQVEISNDGPVTLLLEREAKPA

Sequences:

>Translated_151_residues
MKIVLQRVQQSHVSVNQHIVGQINQGLTLLVGISPTDTDAELQWLARKCLDLRLFPDPEGNPWQASIQDIQGEILVVSQF
TLYGDCRKGRRPSFSGSAKPDQAEQIYEKFVAFLRQSGLKIETGQFGAMMQVEISNDGPVTLLLEREAKPA
>Mature_151_residues
MKIVLQRVQQSHVSVNQHIVGQINQGLTLLVGISPTDTDAELQWLARKCLDLRLFPDPEGNPWQASIQDIQGEILVVSQF
TLYGDCRKGRRPSFSGSAKPDQAEQIYEKFVAFLRQSGLKIETGQFGAMMQVEISNDGPVTLLLEREAKPA

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine

COG id: COG1490

COG function: function code J; D-Tyr-tRNAtyr deacylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTD family

Homologues:

Organism=Homo sapiens, GI30795227, Length=151, Percent_Identity=45.6953642384106, Blast_Score=118, Evalue=2e-27,
Organism=Escherichia coli, GI1790320, Length=145, Percent_Identity=42.0689655172414, Blast_Score=120, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI115533292, Length=151, Percent_Identity=42.3841059602649, Blast_Score=133, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6319982, Length=150, Percent_Identity=44.6666666666667, Blast_Score=134, Evalue=7e-33,
Organism=Drosophila melanogaster, GI281361569, Length=147, Percent_Identity=46.9387755102041, Blast_Score=128, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTD_SYNP2 (B1XM75)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001733478.1
- ProteinModelPortal:   B1XM75
- SMR:   B1XM75
- GeneID:   6057394
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0209
- HOGENOM:   HBG286048
- OMA:   MKAVIQR
- ProtClustDB:   PRK05273
- GO:   GO:0005737
- HAMAP:   MF_00518
- InterPro:   IPR003732
- Gene3D:   G3DSA:3.50.80.10
- PANTHER:   PTHR10472
- TIGRFAMs:   TIGR00256

Pfam domain/function: PF02580 Tyr_Deacylase; SSF69500 DTyrtRNA_deacyls

EC number: NA

Molecular weight: Translated: 16821; Mature: 16821

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: ACT_SITE 81-81

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVLQRVQQSHVSVNQHIVGQINQGLTLLVGISPTDTDAELQWLARKCLDLRLFPDPEG
CHHHHHHHHHHHCCCCHHHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHCEEECCCCCC
NPWQASIQDIQGEILVVSQFTLYGDCRKGRRPSFSGSAKPDQAEQIYEKFVAFLRQSGLK
CCCCHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
IETGQFGAMMQVEISNDGPVTLLLEREAKPA
EECCCCCEEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKIVLQRVQQSHVSVNQHIVGQINQGLTLLVGISPTDTDAELQWLARKCLDLRLFPDPEG
CHHHHHHHHHHHCCCCHHHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHCEEECCCCCC
NPWQASIQDIQGEILVVSQFTLYGDCRKGRRPSFSGSAKPDQAEQIYEKFVAFLRQSGLK
CCCCHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
IETGQFGAMMQVEISNDGPVTLLLEREAKPA
EECCCCCEEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA