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The map label for this gene is hoxW

Identifier: 170076832

GI number: 170076832

Start: 211915

End: 212346

Strand: Direct

Name: hoxW

Synonym: SYNPCC7002_A0201

Alternate gene names: NA

Gene position: 211915-212346 (Clockwise)

Preceding gene: 170076831

Following gene: 170076833

Centisome position: 7.04

GC content: 39.12

Gene sequence:

>432_bases
ATGAAACAAACTTTAATGATTGGTTACGGCAATACATTACGTTCTGATGATGGGGCAGGACAAAAGGTTGCGGAAGCTTT
TTTTGATCAGGAAAATATAACGGCGATCGCTACCCATCAACTCACCCCTGAATTAGTAGAAGATTTGGTACAAGTGGAGC
AGGTTTACTTTATCGATGCGGCTCCCATTGAGACTGTAACGATTAAACCTATTCAACGGAGAGATAATGAACACAATTTT
GGACATTTTATTGACCCCAAAAGCCTTCTGAATTTAGCTCAAGAAATTTATCATTATGCGCCCGATGCTTACTTGGTTTT
AATCCCTGCTCAAGATTTTAAACTGGGAGAAAACTATTCTGAAATAACCCAAAAAGCAATCGAAACAGCGATTCATCTTT
TGCAAGAACGACTCACACCATGCATGAAGTAG

Upstream 100 bases:

>100_bases
GTTTAAGTTGTTCGACCCATGCCGCCGGACAAATGCCGATGATTTTACAATTAATTTCCCCTGATGGTTCCATTGTCAAA
GAAATTCGTCGTGATAGTTA

Downstream 100 bases:

>100_bases
CCATTATGACAGAAACCGTGGCGATCGCCAATGCAGCAGCAGAGCGACAAAATGCCACAAAAATTGTAGGTTTAACCATG
CGAATTGGTGCAATCAGTGG

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: Hydrogenacific Protease; Hydrogenase Maturation Protease Domain Protein

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKQTLMIGYGNTLRSDDGAGQKVAEAFFDQENITAIATHQLTPELVEDLVQVEQVYFIDAAPIETVTIKPIQRRDNEHNF
GHFIDPKSLLNLAQEIYHYAPDAYLVLIPAQDFKLGENYSEITQKAIETAIHLLQERLTPCMK

Sequences:

>Translated_143_residues
MKQTLMIGYGNTLRSDDGAGQKVAEAFFDQENITAIATHQLTPELVEDLVQVEQVYFIDAAPIETVTIKPIQRRDNEHNF
GHFIDPKSLLNLAQEIYHYAPDAYLVLIPAQDFKLGENYSEITQKAIETAIHLLQERLTPCMK
>Mature_143_residues
MKQTLMIGYGNTLRSDDGAGQKVAEAFFDQENITAIATHQLTPELVEDLVQVEQVYFIDAAPIETVTIKPIQRRDNEHNF
GHFIDPKSLLNLAQEIYHYAPDAYLVLIPAQDFKLGENYSEITQKAIETAIHLLQERLTPCMK

Specific function: Unknown

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16232; Mature: 16232

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTLMIGYGNTLRSDDGAGQKVAEAFFDQENITAIATHQLTPELVEDLVQVEQVYFIDA
CCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEECC
APIETVTIKPIQRRDNEHNFGHFIDPKSLLNLAQEIYHYAPDAYLVLIPAQDFKLGENYS
CCCCEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
EITQKAIETAIHLLQERLTPCMK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQTLMIGYGNTLRSDDGAGQKVAEAFFDQENITAIATHQLTPELVEDLVQVEQVYFIDA
CCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEECC
APIETVTIKPIQRRDNEHNFGHFIDPKSLLNLAQEIYHYAPDAYLVLIPAQDFKLGENYS
CCCCEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
EITQKAIETAIHLLQERLTPCMK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA