| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hyp3
Identifier: 170076830
GI number: 170076830
Start: 209783
End: 210409
Strand: Direct
Name: hyp3
Synonym: SYNPCC7002_A0199
Alternate gene names: NA
Gene position: 209783-210409 (Clockwise)
Preceding gene: 170076829
Following gene: 170076831
Centisome position: 6.97
GC content: 41.47
Gene sequence:
>627_bases ATGCTGACTGCCGCCGATATCATGAATCCCAATGTGGTGACGATCAAAGGTTTAGCGACCATTGCCAGTGCCACCCAATG TATGCGGGTGAATAAAACCCGTGTATTAATAGTTGATCGTCGCCATGTTCACGATGCCTACGGCATTTTGACCGCCACCG ATATCGTCAGTAAAGTGATCGCCTATGGTCGTGATCCAAGGGCAATACGGGTCTATGAAATTATGACCAAACCTTGTATT TTCGTGAGTCCTGATCTGGCGGTTGAATATGTTGCCCGCCTATTTAGTCAATGGAATTTGCACAGTGCCCCCGTCATGAC TGACAAACTTTTAGGGATAATTACCGTTGAAGATTTAATTAGCAAAAGTGATTTTTTAGAACGTCCCAAAGAACTATTAT TTGCCGCAGAAATGCAAGCCGCAATTCAAAAGACAAAATTAATCTGTCAAGAAAAAGGACATGATTCGAGTGATTGTATT CAAGCATGGGCAATGGTGGAAGAACTACAAGCTAAAACCGCCTACCAACAATCTACAAAAGTAGATAAAACCGCCCTTGA AGAATATTTAGAAAAAAATCCAGAAGCCATCGATCATTTAATGGTTGATAATTGGTGTAGTGGTTAA
Upstream 100 bases:
>100_bases TTAAAGCGGCGATCGCCCCCTTATTAGAAGGAAAATTGCCGGAAATGGAAGGACGAGAAATGATCAAATTCGGCTAGATT TTATGTCCCAAACATTTGCC
Downstream 100 bases:
>100_bases CAGTCATAATTCGTTAAAATAAAAACTATTTTAATCAACACATTTTTAGCGTTCGTTTGAAAAATCATCTAGGAGTAAAA AATGTCTAAAACAATCATTA
Product: CBS domain-containing protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Signal-Transduction Protein With CBS Domains; CBS Domain Pair Protein; Signal Transduction Protein With CBS Domains; CBS Domain Protein; CBS Domain Containing Protein; Signal Transduction Protein; CP12 Polypeptide; CP12 Domain Protein
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLTAADIMNPNVVTIKGLATIASATQCMRVNKTRVLIVDRRHVHDAYGILTATDIVSKVIAYGRDPRAIRVYEIMTKPCI FVSPDLAVEYVARLFSQWNLHSAPVMTDKLLGIITVEDLISKSDFLERPKELLFAAEMQAAIQKTKLICQEKGHDSSDCI QAWAMVEELQAKTAYQQSTKVDKTALEEYLEKNPEAIDHLMVDNWCSG
Sequences:
>Translated_208_residues MLTAADIMNPNVVTIKGLATIASATQCMRVNKTRVLIVDRRHVHDAYGILTATDIVSKVIAYGRDPRAIRVYEIMTKPCI FVSPDLAVEYVARLFSQWNLHSAPVMTDKLLGIITVEDLISKSDFLERPKELLFAAEMQAAIQKTKLICQEKGHDSSDCI QAWAMVEELQAKTAYQQSTKVDKTALEEYLEKNPEAIDHLMVDNWCSG >Mature_208_residues MLTAADIMNPNVVTIKGLATIASATQCMRVNKTRVLIVDRRHVHDAYGILTATDIVSKVIAYGRDPRAIRVYEIMTKPCI FVSPDLAVEYVARLFSQWNLHSAPVMTDKLLGIITVEDLISKSDFLERPKELLFAAEMQAAIQKTKLICQEKGHDSSDCI QAWAMVEELQAKTAYQQSTKVDKTALEEYLEKNPEAIDHLMVDNWCSG
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23328; Mature: 23328
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAADIMNPNVVTIKGLATIASATQCMRVNKTRVLIVDRRHVHDAYGILTATDIVSKVI CCCCCHHCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH AYGRDPRAIRVYEIMTKPCIFVSPDLAVEYVARLFSQWNLHSAPVMTDKLLGIITVEDLI HCCCCCCEEEEEEHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SKSDFLERPKELLFAAEMQAAIQKTKLICQEKGHDSSDCIQAWAMVEELQAKTAYQQSTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC VDKTALEEYLEKNPEAIDHLMVDNWCSG HHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLTAADIMNPNVVTIKGLATIASATQCMRVNKTRVLIVDRRHVHDAYGILTATDIVSKVI CCCCCHHCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH AYGRDPRAIRVYEIMTKPCIFVSPDLAVEYVARLFSQWNLHSAPVMTDKLLGIITVEDLI HCCCCCCEEEEEEHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SKSDFLERPKELLFAAEMQAAIQKTKLICQEKGHDSSDCIQAWAMVEELQAKTAYQQSTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC VDKTALEEYLEKNPEAIDHLMVDNWCSG HHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA