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The map label for this gene is 170025776

Identifier: 170025776

GI number: 170025776

Start: 3923154

End: 3924998

Strand: Reverse

Name: 170025776

Synonym: YPK_3561

Alternate gene names: NA

Gene position: 3924998-3923154 (Counterclockwise)

Preceding gene: 170025777

Following gene: 170025775

Centisome position: 83.7

GC content: 51.65

Gene sequence:

>1845_bases
ATGCCCAACGAAAGTTTTCTGGCTCTATACAACGAAGAGTTGCGTTATCTGCGTGAAGATGGGCAGCGCTTCGCTCATAT
GCATCCGCAAGTCGCCCAACACCTTGGGTTACATGCTGATGGTGTGCTCGATCCTTTCGTCGAACGGCTCCTTGAAGGCA
CCGCTTTCTTGAGTTCCCGTATCCAACAGCGTTTGAACAACGAGCATCCAGAGTTTGCTTTGCAAATGCTTGGGCGTTTG
GCCCCACTTTGGTATACACCCCTGCCGTCGATTGCCACCATTGCCATGGTTCCGGATCTTACGTCACCGCAATGGCACTC
GCGCGTCGTATTGCCTAAAGGTAGCCGCGTGACATTGAGTGACAGTTCGCTGAACAACCGGTTGGCGAATTTCTCTACTG
GCCGCACGCTGAAAATACAGCCATTGGTCATTGAAAATGCCGAGTGTGCCAGCACGCCACCGGCGTATTTACCGCTCTCT
GTGGCTTCACAATTACAAGCTGGTCAGGCCCATCTGCGCTTGCGTCTGACCACTCAAGGTGTCGCGTCTTTATCTGAGCT
GGATTTCGCCCCGATGAACCTGACGCTGGCGGGGGGAATAATTCAGTCAAATCAGTTAATCACGACACTGTTGAATAACA
CCTTACATATTGTTTTGTGGGCCAACACGGATGGGAAACCGCTGGTCAAAGTTCTTACCAAAGAACATCTTCGCCAGGGA
GGGCTGGATGAACAAGAGGCGCTTTTACCTGTTGCGATCAGCGAAATGCCTGGAAACCGTTTGCTACGAGAATATTTTGC
TGCTCCTTCGCGTTTTTTCGATCTGGAACTGCATGGCCTCAACGACTTCCTGCAACAAGGGGACGGCATTCATACCTTTG
AGGTGCTGTTTGTACTGGATCAGCGCCCCCTACATTTGATTGATAGGGTCACTGGCAATGACTTCCGACTCTTCGCCACA
CCTATTATTAACCTGTTCAAACGCCGTTGTAGCCCGGTGCTGATTAATGGTGAACACACCGAATATCCCGTCATTGTTGA
CCCCCTGAACCCCCGCTTGTACGAAGTCCATCATGTAATCGGGGTCAACGGTTTGTTGAGCGAAGGGGGGAGCGTGCAGT
TTTCTTCCCTTCATGGTCATGCCCGTTTTGATGATGACGATAAAGTGGCGGGTTACAGCATTCGCCGTCGCCGCGACTTC
ACGGATAAAAATCATCAGAAAAATTCACCTTTACCTCATGACAGCTTATTCATTGCCCTTTCACCGGGGACCAGCGGGAT
AGATATTGATCACGTCAAGTCGCTGTCGATTGAAGCCATGGTGTGCGAACGCCACTTAATTCCCAGCCAATTACAGCATC
CGGAATTCAAGCTGGAAATTGCCCTGCCAGTGGGGCAGATCGAAATGCTGCGTCACCCGGCAAAACCACAGGGTGTGCCG
AATATTGATCAAGCCTGGCGGGCGTTACAACTGATTGCCAACAATCCGCTGCGTTATGCGCTGCCGGATGTCACCGATTG
TTCGACGCTGCTAAAAGATTGGCTGTCGATATTTTGTCAGCATGAAGAGGCGAGCCAGCATAAGAGGATCACTAGCCTGA
CTCACGCCAGTGTGGCGCATAATTTTGAACGTCATACCGCTCCGGGGCCGATCGCCTGGAGCCGGGGGGTTGAAGCCACA
CTGGATTTCAACAGCAGCCACCACAGTGATAAAGGTGCATTCCTCTTTGCGCGGATCCTGCATCACGCGCTGTCAGAATA
TTGTGAATTAGGGCAGACCCTGAGGTTACACATGCAGGTTGATGGTGAAACCTTCGCCAAATGGGGGCCTGTCAACTATG
GCTAG

Upstream 100 bases:

>100_bases
GCGAAGAGCACTTGGTCAATTTACGCATCGCGCTCGATTACTCCTATGGAATGGTTCGCGTTCTTTAAATAACGCACAGA
GATAAAACAGGGAAACCGTC

Downstream 100 bases:

>100_bases
CCTCCAGATGCTGAAAAACACGTTTCTGCCGGGTATCTCGGCCAGTCAGGACTTTTTCGAGTTGCTGCGTCGGATTGAGC
GTGCCACTCCAGAGCAAGGC

Product: type VI secretion protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MPNESFLALYNEELRYLREDGQRFAHMHPQVAQHLGLHADGVLDPFVERLLEGTAFLSSRIQQRLNNEHPEFALQMLGRL
APLWYTPLPSIATIAMVPDLTSPQWHSRVVLPKGSRVTLSDSSLNNRLANFSTGRTLKIQPLVIENAECASTPPAYLPLS
VASQLQAGQAHLRLRLTTQGVASLSELDFAPMNLTLAGGIIQSNQLITTLLNNTLHIVLWANTDGKPLVKVLTKEHLRQG
GLDEQEALLPVAISEMPGNRLLREYFAAPSRFFDLELHGLNDFLQQGDGIHTFEVLFVLDQRPLHLIDRVTGNDFRLFAT
PIINLFKRRCSPVLINGEHTEYPVIVDPLNPRLYEVHHVIGVNGLLSEGGSVQFSSLHGHARFDDDDKVAGYSIRRRRDF
TDKNHQKNSPLPHDSLFIALSPGTSGIDIDHVKSLSIEAMVCERHLIPSQLQHPEFKLEIALPVGQIEMLRHPAKPQGVP
NIDQAWRALQLIANNPLRYALPDVTDCSTLLKDWLSIFCQHEEASQHKRITSLTHASVAHNFERHTAPGPIAWSRGVEAT
LDFNSSHHSDKGAFLFARILHHALSEYCELGQTLRLHMQVDGETFAKWGPVNYG

Sequences:

>Translated_614_residues
MPNESFLALYNEELRYLREDGQRFAHMHPQVAQHLGLHADGVLDPFVERLLEGTAFLSSRIQQRLNNEHPEFALQMLGRL
APLWYTPLPSIATIAMVPDLTSPQWHSRVVLPKGSRVTLSDSSLNNRLANFSTGRTLKIQPLVIENAECASTPPAYLPLS
VASQLQAGQAHLRLRLTTQGVASLSELDFAPMNLTLAGGIIQSNQLITTLLNNTLHIVLWANTDGKPLVKVLTKEHLRQG
GLDEQEALLPVAISEMPGNRLLREYFAAPSRFFDLELHGLNDFLQQGDGIHTFEVLFVLDQRPLHLIDRVTGNDFRLFAT
PIINLFKRRCSPVLINGEHTEYPVIVDPLNPRLYEVHHVIGVNGLLSEGGSVQFSSLHGHARFDDDDKVAGYSIRRRRDF
TDKNHQKNSPLPHDSLFIALSPGTSGIDIDHVKSLSIEAMVCERHLIPSQLQHPEFKLEIALPVGQIEMLRHPAKPQGVP
NIDQAWRALQLIANNPLRYALPDVTDCSTLLKDWLSIFCQHEEASQHKRITSLTHASVAHNFERHTAPGPIAWSRGVEAT
LDFNSSHHSDKGAFLFARILHHALSEYCELGQTLRLHMQVDGETFAKWGPVNYG
>Mature_613_residues
PNESFLALYNEELRYLREDGQRFAHMHPQVAQHLGLHADGVLDPFVERLLEGTAFLSSRIQQRLNNEHPEFALQMLGRLA
PLWYTPLPSIATIAMVPDLTSPQWHSRVVLPKGSRVTLSDSSLNNRLANFSTGRTLKIQPLVIENAECASTPPAYLPLSV
ASQLQAGQAHLRLRLTTQGVASLSELDFAPMNLTLAGGIIQSNQLITTLLNNTLHIVLWANTDGKPLVKVLTKEHLRQGG
LDEQEALLPVAISEMPGNRLLREYFAAPSRFFDLELHGLNDFLQQGDGIHTFEVLFVLDQRPLHLIDRVTGNDFRLFATP
IINLFKRRCSPVLINGEHTEYPVIVDPLNPRLYEVHHVIGVNGLLSEGGSVQFSSLHGHARFDDDDKVAGYSIRRRRDFT
DKNHQKNSPLPHDSLFIALSPGTSGIDIDHVKSLSIEAMVCERHLIPSQLQHPEFKLEIALPVGQIEMLRHPAKPQGVPN
IDQAWRALQLIANNPLRYALPDVTDCSTLLKDWLSIFCQHEEASQHKRITSLTHASVAHNFERHTAPGPIAWSRGVEATL
DFNSSHHSDKGAFLFARILHHALSEYCELGQTLRLHMQVDGETFAKWGPVNYG

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68768; Mature: 68637

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNESFLALYNEELRYLREDGQRFAHMHPQVAQHLGLHADGVLDPFVERLLEGTAFLSSR
CCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IQQRLNNEHPEFALQMLGRLAPLWYTPLPSIATIAMVPDLTSPQWHSRVVLPKGSRVTLS
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCCCCCEEEECCCCEEEEE
DSSLNNRLANFSTGRTLKIQPLVIENAECASTPPAYLPLSVASQLQAGQAHLRLRLTTQG
CCCHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCEECHHHHHHHHCCCEEEEEEEEHHH
VASLSELDFAPMNLTLAGGIIQSNQLITTLLNNTLHIVLWANTDGKPLVKVLTKEHLRQG
HHHHHHCCCCCCEEEEECCEEECCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHC
GLDEQEALLPVAISEMPGNRLLREYFAAPSRFFDLELHGLNDFLQQGDGIHTFEVLFVLD
CCCHHHCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCEEEEEEEEEC
QRPLHLIDRVTGNDFRLFATPIINLFKRRCSPVLINGEHTEYPVIVDPLNPRLYEVHHVI
CCCHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCHHHHHHHH
GVNGLLSEGGSVQFSSLHGHARFDDDDKVAGYSIRRRRDFTDKNHQKNSPLPHDSLFIAL
CCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEE
SPGTSGIDIDHVKSLSIEAMVCERHLIPSQLQHPEFKLEIALPVGQIEMLRHPAKPQGVP
CCCCCCCCHHHHHCCCHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCC
NIDQAWRALQLIANNPLRYALPDVTDCSTLLKDWLSIFCQHEEASQHKRITSLTHASVAH
CHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
NFERHTAPGPIAWSRGVEATLDFNSSHHSDKGAFLFARILHHALSEYCELGQTLRLHMQV
HHHHCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
DGETFAKWGPVNYG
CCCHHHCCCCCCCC
>Mature Secondary Structure 
PNESFLALYNEELRYLREDGQRFAHMHPQVAQHLGLHADGVLDPFVERLLEGTAFLSSR
CCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IQQRLNNEHPEFALQMLGRLAPLWYTPLPSIATIAMVPDLTSPQWHSRVVLPKGSRVTLS
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCCCCCEEEECCCCEEEEE
DSSLNNRLANFSTGRTLKIQPLVIENAECASTPPAYLPLSVASQLQAGQAHLRLRLTTQG
CCCHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCEECHHHHHHHHCCCEEEEEEEEHHH
VASLSELDFAPMNLTLAGGIIQSNQLITTLLNNTLHIVLWANTDGKPLVKVLTKEHLRQG
HHHHHHCCCCCCEEEEECCEEECCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHC
GLDEQEALLPVAISEMPGNRLLREYFAAPSRFFDLELHGLNDFLQQGDGIHTFEVLFVLD
CCCHHHCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCEEEEEEEEEC
QRPLHLIDRVTGNDFRLFATPIINLFKRRCSPVLINGEHTEYPVIVDPLNPRLYEVHHVI
CCCHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCHHHHHHHH
GVNGLLSEGGSVQFSSLHGHARFDDDDKVAGYSIRRRRDFTDKNHQKNSPLPHDSLFIAL
CCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEE
SPGTSGIDIDHVKSLSIEAMVCERHLIPSQLQHPEFKLEIALPVGQIEMLRHPAKPQGVP
CCCCCCCCHHHHHCCCHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCC
NIDQAWRALQLIANNPLRYALPDVTDCSTLLKDWLSIFCQHEEASQHKRITSLTHASVAH
CHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
NFERHTAPGPIAWSRGVEATLDFNSSHHSDKGAFLFARILHHALSEYCELGQTLRLHMQV
HHHHCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
DGETFAKWGPVNYG
CCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA