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The map label for this gene is 170025777

Identifier: 170025777

GI number: 170025777

Start: 3925031

End: 3925474

Strand: Reverse

Name: 170025777

Synonym: YPK_3562

Alternate gene names: NA

Gene position: 3925474-3925031 (Counterclockwise)

Preceding gene: 170025778

Following gene: 170025776

Centisome position: 83.71

GC content: 48.87

Gene sequence:

>444_bases
ATGGATATTTCAGCACCGATACTTTTTGACAAATTAAGTCTCCGCCATGAACACGTTCGCTTACCTCATTGGCGTGAAGT
GATTGTGCGCGATATTGAATCTTTATTGAATGACTCCGCACACAGTGCCCGGTTGAAGCTAAAAAAGTATCCGCATTGTG
AGGCTTCCGTATTGAATTACGGCCTGCCTTCGCTCAGCCAGCAGGTTCCGGTAATCACCGACTTGCTGGAACTGGCCAGA
CATATACAGCGGATCATCGCCACGTTTGAGTCACGCCTGGATCCGCGCTCAATAAAAGTGGTGCCGCTGATTAATAAAGG
CGAAACCTGGGTGTTAGCCATCCTGTTTGACATTCATGCCCGGTGCAACCTACCGGGCGAAGAGCACTTGGTCAATTTAC
GCATCGCGCTCGATTACTCCTATGGAATGGTTCGCGTTCTTTAA

Upstream 100 bases:

>100_bases
GATCTGAAATTGAACAACCGTATTTAAGTCAGAAATGCATTAGGACTGCTCTCGCGAGTTAGGAGAGCAGTCTTCCAAAC
TGGATTGGGGAGGGCTAATT

Downstream 100 bases:

>100_bases
ATAACGCACAGAGATAAAACAGGGAAACCGTCATGCCCAACGAAAGTTTTCTGGCTCTATACAACGAAGAGTTGCGTTAT
CTGCGTGAAGATGGGCAGCG

Product: type VI secretion system lysozyme-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDISAPILFDKLSLRHEHVRLPHWREVIVRDIESLLNDSAHSARLKLKKYPHCEASVLNYGLPSLSQQVPVITDLLELAR
HIQRIIATFESRLDPRSIKVVPLINKGETWVLAILFDIHARCNLPGEEHLVNLRIALDYSYGMVRVL

Sequences:

>Translated_147_residues
MDISAPILFDKLSLRHEHVRLPHWREVIVRDIESLLNDSAHSARLKLKKYPHCEASVLNYGLPSLSQQVPVITDLLELAR
HIQRIIATFESRLDPRSIKVVPLINKGETWVLAILFDIHARCNLPGEEHLVNLRIALDYSYGMVRVL
>Mature_147_residues
MDISAPILFDKLSLRHEHVRLPHWREVIVRDIESLLNDSAHSARLKLKKYPHCEASVLNYGLPSLSQQVPVITDLLELAR
HIQRIIATFESRLDPRSIKVVPLINKGETWVLAILFDIHARCNLPGEEHLVNLRIALDYSYGMVRVL

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16901; Mature: 16901

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISAPILFDKLSLRHEHVRLPHWREVIVRDIESLLNDSAHSARLKLKKYPHCEASVLNY
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCHHHHHC
GLPSLSQQVPVITDLLELARHIQRIIATFESRLDPRSIKVVPLINKGETWVLAILFDIHA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHEEEHHHH
RCNLPGEEHLVNLRIALDYSYGMVRVL
HCCCCCCHHEEEEEEEEEECCCEEEEC
>Mature Secondary Structure
MDISAPILFDKLSLRHEHVRLPHWREVIVRDIESLLNDSAHSARLKLKKYPHCEASVLNY
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCHHHHHC
GLPSLSQQVPVITDLLELARHIQRIIATFESRLDPRSIKVVPLINKGETWVLAILFDIHA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHEEEHHHH
RCNLPGEEHLVNLRIALDYSYGMVRVL
HCCCCCCHHEEEEEEEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA