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The map label for this gene is 170025775

Identifier: 170025775

GI number: 170025775

Start: 3922178

End: 3923161

Strand: Reverse

Name: 170025775

Synonym: YPK_3560

Alternate gene names: NA

Gene position: 3923161-3922178 (Counterclockwise)

Preceding gene: 170025776

Following gene: 170025774

Centisome position: 83.66

GC content: 51.93

Gene sequence:

>984_bases
ATGGCTAGCCTCCAGATGCTGAAAAACACGTTTCTGCCGGGTATCTCGGCCAGTCAGGACTTTTTCGAGTTGCTGCGTCG
GATTGAGCGTGCCACTCCAGAGCAAGGCCGGCTTGGCACCCAACGTGATCGTAGCCACCTGAGGCTACGTATTATTCAGC
CTGCCGATATGGGATTTGCACCGCGTGAAGTGAGTGATATCAGGCAAACGCTGAACACTCATCAGCATCTGGCAGAGATC
ACCATTTTCTGCCGCCATTTTGGTTTATTTGCCCCGTATGGCCCGTTGCCAATACATGTTACCGAACATGCTCGTAACGA
AGCGTTGGCTAAACGTAATCAGGCCTTTGAACATTTTGCGGGCATTCTCAGCCAGCGAATGGCGATCTTGCATTATCGCT
CTTGGGCCCAAATGCACGTCGCCGTGGGGCATGATCGCGCGTCAGCCAATCCCTTTATGAACCATGTGCGTCAAATCGTG
GGCCTAACGCCGCAGCAAGCGCTGAATTCACATGTGGATCGGGTACGGCGTTGCTTTCCGGGGGTGTATCTGCCGGGCAG
AGGATCATTACGCAAATTACAGGAGATCCTGAGCCTGTATTTCTCGGTTCCTATCCGTGTTGAAGCCCGTAAAGGATTGT
GGATTGACGACTCGCGCAATATAGAAAGCCAACGTATGGGACGGTTGGGTAACACGCGTATTGGCAGCCGTTTCTTCGAT
GTGCAGCACAGCCTGGTGTTATCTATTGGTCCGGTATCTGACCCCCAATATCTGGATTTTCAACGCAACAGCAAACGCAT
TAACACTCTGGTGCAAATCTGCCATGACTTTGTCCGCCATCGGATGGTGCTGGACGTGCAATTAATCATACAGACCTCAC
CCAATATGGCTTGTCGTCTTGGCGGTGGAACGCTCAGCCGCCATAGCTGGTTAAAGCCAGGCTCAGCCTTGAGTATACAG
CCAATTTATAGAACGGTTACCTAG

Upstream 100 bases:

>100_bases
CTGCATCACGCGCTGTCAGAATATTGTGAATTAGGGCAGACCCTGAGGTTACACATGCAGGTTGATGGTGAAACCTTCGC
CAAATGGGGGCCTGTCAACT

Downstream 100 bases:

>100_bases
CTATGGGAGCGATAACGGTGTATCAACGCGAACGTCTTTTTAATCGATTGGGCACTTTTGCCTATAAAACTTTTGTTGAA
GCCACCCGTCTTTGCCGCAG

Product: type VI secretion protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MASLQMLKNTFLPGISASQDFFELLRRIERATPEQGRLGTQRDRSHLRLRIIQPADMGFAPREVSDIRQTLNTHQHLAEI
TIFCRHFGLFAPYGPLPIHVTEHARNEALAKRNQAFEHFAGILSQRMAILHYRSWAQMHVAVGHDRASANPFMNHVRQIV
GLTPQQALNSHVDRVRRCFPGVYLPGRGSLRKLQEILSLYFSVPIRVEARKGLWIDDSRNIESQRMGRLGNTRIGSRFFD
VQHSLVLSIGPVSDPQYLDFQRNSKRINTLVQICHDFVRHRMVLDVQLIIQTSPNMACRLGGGTLSRHSWLKPGSALSIQ
PIYRTVT

Sequences:

>Translated_327_residues
MASLQMLKNTFLPGISASQDFFELLRRIERATPEQGRLGTQRDRSHLRLRIIQPADMGFAPREVSDIRQTLNTHQHLAEI
TIFCRHFGLFAPYGPLPIHVTEHARNEALAKRNQAFEHFAGILSQRMAILHYRSWAQMHVAVGHDRASANPFMNHVRQIV
GLTPQQALNSHVDRVRRCFPGVYLPGRGSLRKLQEILSLYFSVPIRVEARKGLWIDDSRNIESQRMGRLGNTRIGSRFFD
VQHSLVLSIGPVSDPQYLDFQRNSKRINTLVQICHDFVRHRMVLDVQLIIQTSPNMACRLGGGTLSRHSWLKPGSALSIQ
PIYRTVT
>Mature_326_residues
ASLQMLKNTFLPGISASQDFFELLRRIERATPEQGRLGTQRDRSHLRLRIIQPADMGFAPREVSDIRQTLNTHQHLAEIT
IFCRHFGLFAPYGPLPIHVTEHARNEALAKRNQAFEHFAGILSQRMAILHYRSWAQMHVAVGHDRASANPFMNHVRQIVG
LTPQQALNSHVDRVRRCFPGVYLPGRGSLRKLQEILSLYFSVPIRVEARKGLWIDDSRNIESQRMGRLGNTRIGSRFFDV
QHSLVLSIGPVSDPQYLDFQRNSKRINTLVQICHDFVRHRMVLDVQLIIQTSPNMACRLGGGTLSRHSWLKPGSALSIQP
IYRTVT

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37376; Mature: 37245

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLQMLKNTFLPGISASQDFFELLRRIERATPEQGRLGTQRDRSHLRLRIIQPADMGFA
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
PREVSDIRQTLNTHQHLAEITIFCRHFGLFAPYGPLPIHVTEHARNEALAKRNQAFEHFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH
GILSQRMAILHYRSWAQMHVAVGHDRASANPFMNHVRQIVGLTPQQALNSHVDRVRRCFP
HHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GVYLPGRGSLRKLQEILSLYFSVPIRVEARKGLWIDDSRNIESQRMGRLGNTRIGSRFFD
CCEECCCCCHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCHHHHCCCCCCHHHHHHHH
VQHSLVLSIGPVSDPQYLDFQRNSKRINTLVQICHDFVRHRMVLDVQLIIQTSPNMACRL
HHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEE
GGGTLSRHSWLKPGSALSIQPIYRTVT
CCCCCCCCCCCCCCCCEEECHHHHCCC
>Mature Secondary Structure 
ASLQMLKNTFLPGISASQDFFELLRRIERATPEQGRLGTQRDRSHLRLRIIQPADMGFA
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
PREVSDIRQTLNTHQHLAEITIFCRHFGLFAPYGPLPIHVTEHARNEALAKRNQAFEHFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH
GILSQRMAILHYRSWAQMHVAVGHDRASANPFMNHVRQIVGLTPQQALNSHVDRVRRCFP
HHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GVYLPGRGSLRKLQEILSLYFSVPIRVEARKGLWIDDSRNIESQRMGRLGNTRIGSRFFD
CCEECCCCCHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCHHHHCCCCCCHHHHHHHH
VQHSLVLSIGPVSDPQYLDFQRNSKRINTLVQICHDFVRHRMVLDVQLIIQTSPNMACRL
HHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEE
GGGTLSRHSWLKPGSALSIQPIYRTVT
CCCCCCCCCCCCCCCCEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA