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The map label for this gene is ycgB [H]

Identifier: 170024342

GI number: 170024342

Start: 2338316

End: 2339851

Strand: Direct

Name: ycgB [H]

Synonym: YPK_2108

Alternate gene names: 170024342

Gene position: 2338316-2339851 (Clockwise)

Preceding gene: 170024340

Following gene: 170024344

Centisome position: 49.86

GC content: 44.47

Gene sequence:

>1536_bases
ATGACAACTTCAACATCGAAACAGACCACACAAGATAAGCGCCTGACTGACGGCCCTGACTGGACATTTGAGCTACTGCA
AGTGTATCTGGACCAAATAGATCGGGTGGCGAAACATTACCGGCTTGATACTTATCCCCATCAGATAGAAGTGATTACCT
CAGAACAAATGATGGATGCCTATTCAAGTATTGGCATGCCCATTAACTATACCCATTGGTCTTTCGGTAAAAAATTTATC
GAAACTGAACAAAAATATAAGTACGGTCAACAGGGATTAGCCTACGAGATTGTTATTAACTCGAATCCTTGTATCGCCTA
CTTAATGGAAGAGAACACCATCACGATGCAAGCACTGGTTATGGCCCATGCCTGCTACGGACATAACTCCTTCTTTAAGA
ATAACTATTTATTCCGCGCGTGGACTGACGCCAGCTCCATCGTGGACTACCTACTCTTTGCCCGCCACTATATTAATGAG
TGTGAAGAGCGCTATGGCGTTGAAGAGGTTGAACGGTTGCTCGATTCTTGTCATGCGTTAATGAATTATGGCGTTGATCG
CTATAAGCGTCCGCAAAAAATTTCGCTGGTCGAGGAGACCGCACGCCAAAAAAGCCGTGAAGAATATCTACAAAGCCAAG
TGAATTCCCTGTGGAAAACGTTGCCACGTAAAGATCGAGAAGAAGCTCCTGTTCAGGCACAGCGCTACCCCAACGAACCG
CAAGAAAATATCCTCTACTTTATGGAGAAAAATGCACCGTTGTTGGAATCATGGCAACGTGAAATATTGCGAATTGTCCG
CAAAGTCAGCCAGTATTTTTATCCCCAAAAACAAACGCAAGTGATGAATGAAGGCTGGGCGACATTCTGGCACTACACCA
TTCTTAACCATTTATACGATGAAGGCCGGGTCACCGACCGCTTTATGATGGAGTTTCTGCACAGCCATACCAACGTCGTG
TATCAGCCACCGTATAACAGCCCTTATTACAACGGCATTAACCCTTATGCTCTTGGCTTCGCTATGTTTCAGGATATTAA
ACGGATCTGTCAGTCCCCGACCGAGGAAGACTATTATTGGTTCCCAGATATTGCCGGGAAAGATTGGTTAGATACCCTAC
ATTTTGCTATGCGTGATTTTAAAGATGAAAGTTTCATCAGCCAGTTCTTATCGCCAAAAATAATGCGCGATTTCCGCCTG
TTTACCGTGTTGGACGACGACAAGAATAACTACCTGGAGATTTCGGCTATTCATAATGAAGAAGGTTATCGTACTATCCG
CAATCAATTGTCCGCACAGTATAACTTGAGCAACCATGAGCCAAACATTCAGGTATGGAATGTTGATCTACGTGGAGACC
GCTCTCTGACACTGCGTTATATCCCGCATGACCGAGCGCCATTAGATAAAAGCCGCCAGCAAGTGATGAAGCATATTCAT
CGGCTGTGGGGGTTTGATGTTCATATGGAACAATTGAATGATGATGGCAGTATCGATTTGCTCGACAGCATTCCGCAGAA
AACCAGTAAGATTTAA

Upstream 100 bases:

>100_bases
TGACATAAGGTCTTGCCATGCCTCAGTTTGTTGATATTGAGCTAGGATTAGTAAAGTGACGAGTATTTGAGTTGGGCGAT
AAAAACGTGAGGATGCGCTA

Downstream 100 bases:

>100_bases
GTCATTACCGCATATGACATCGGTAAAAAAGGGGCATTAAACGCCCCTCAGACTGCTGACAAAGTCAAATGAAGGGGAAA
CGTGCCGTTGGGGTCGTAGT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTTSTSKQTTQDKRLTDGPDWTFELLQVYLDQIDRVAKHYRLDTYPHQIEVITSEQMMDAYSSIGMPINYTHWSFGKKFI
ETEQKYKYGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRAWTDASSIVDYLLFARHYINE
CEERYGVEEVERLLDSCHALMNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNSLWKTLPRKDREEAPVQAQRYPNEP
QENILYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGRVTDRFMMEFLHSHTNVV
YQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDYYWFPDIAGKDWLDTLHFAMRDFKDESFISQFLSPKIMRDFRL
FTVLDDDKNNYLEISAIHNEEGYRTIRNQLSAQYNLSNHEPNIQVWNVDLRGDRSLTLRYIPHDRAPLDKSRQQVMKHIH
RLWGFDVHMEQLNDDGSIDLLDSIPQKTSKI

Sequences:

>Translated_511_residues
MTTSTSKQTTQDKRLTDGPDWTFELLQVYLDQIDRVAKHYRLDTYPHQIEVITSEQMMDAYSSIGMPINYTHWSFGKKFI
ETEQKYKYGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRAWTDASSIVDYLLFARHYINE
CEERYGVEEVERLLDSCHALMNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNSLWKTLPRKDREEAPVQAQRYPNEP
QENILYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGRVTDRFMMEFLHSHTNVV
YQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDYYWFPDIAGKDWLDTLHFAMRDFKDESFISQFLSPKIMRDFRL
FTVLDDDKNNYLEISAIHNEEGYRTIRNQLSAQYNLSNHEPNIQVWNVDLRGDRSLTLRYIPHDRAPLDKSRQQVMKHIH
RLWGFDVHMEQLNDDGSIDLLDSIPQKTSKI
>Mature_510_residues
TTSTSKQTTQDKRLTDGPDWTFELLQVYLDQIDRVAKHYRLDTYPHQIEVITSEQMMDAYSSIGMPINYTHWSFGKKFIE
TEQKYKYGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRAWTDASSIVDYLLFARHYINEC
EERYGVEEVERLLDSCHALMNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNSLWKTLPRKDREEAPVQAQRYPNEPQ
ENILYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGRVTDRFMMEFLHSHTNVVY
QPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDYYWFPDIAGKDWLDTLHFAMRDFKDESFISQFLSPKIMRDFRLF
TVLDDDKNNYLEISAIHNEEGYRTIRNQLSAQYNLSNHEPNIQVWNVDLRGDRSLTLRYIPHDRAPLDKSRQQVMKHIHR
LWGFDVHMEQLNDDGSIDLLDSIPQKTSKI

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=508, Percent_Identity=84.8425196850394, Blast_Score=928, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60922; Mature: 60791

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTSKQTTQDKRLTDGPDWTFELLQVYLDQIDRVAKHYRLDTYPHQIEVITSEQMMDA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
YSSIGMPINYTHWSFGKKFIETEQKYKYGQQGLAYEIVINSNPCIAYLMEENTITMQALV
HHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRAWTDASSIVDYLLFARHYINECEERYGVEEVERLLDSCHAL
HHHHHHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNSLWKTLPRKDREEAPVQAQRYPNEP
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
QENILYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYD
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHH
EGRVTDRFMMEFLHSHTNVVYQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDYYW
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
FPDIAGKDWLDTLHFAMRDFKDESFISQFLSPKIMRDFRLFTVLDDDKNNYLEISAIHNE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHEEEEEEEECCCCCEEEEEEEECC
EGYRTIRNQLSAQYNLSNHEPNIQVWNVDLRGDRSLTLRYIPHDRAPLDKSRQQVMKHIH
HHHHHHHHHHHCEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH
RLWGFDVHMEQLNDDGSIDLLDSIPQKTSKI
HHHCCCHHHHHCCCCCCCHHHHHCCHHHCCC
>Mature Secondary Structure 
TTSTSKQTTQDKRLTDGPDWTFELLQVYLDQIDRVAKHYRLDTYPHQIEVITSEQMMDA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
YSSIGMPINYTHWSFGKKFIETEQKYKYGQQGLAYEIVINSNPCIAYLMEENTITMQALV
HHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRAWTDASSIVDYLLFARHYINECEERYGVEEVERLLDSCHAL
HHHHHHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNSLWKTLPRKDREEAPVQAQRYPNEP
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
QENILYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYD
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHH
EGRVTDRFMMEFLHSHTNVVYQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDYYW
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
FPDIAGKDWLDTLHFAMRDFKDESFISQFLSPKIMRDFRLFTVLDDDKNNYLEISAIHNE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHEEEEEEEECCCCCEEEEEEEECC
EGYRTIRNQLSAQYNLSNHEPNIQVWNVDLRGDRSLTLRYIPHDRAPLDKSRQQVMKHIH
HHHHHHHHHHHCEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH
RLWGFDVHMEQLNDDGSIDLLDSIPQKTSKI
HHHCCCHHHHHCCCCCCCHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]