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The map label for this gene is 170023468

Identifier: 170023468

GI number: 170023468

Start: 1350090

End: 1351694

Strand: Direct

Name: 170023468

Synonym: YPK_1222

Alternate gene names: NA

Gene position: 1350090-1351694 (Clockwise)

Preceding gene: 170023466

Following gene: 170023469

Centisome position: 28.79

GC content: 51.71

Gene sequence:

>1605_bases
GTGCCGTTACCGTTCCCGTTTGACTTCAAGAGCCCGGATTACACTCAGGTTTTTGAGTGGAGAATGGAGCGACTACAGCG
CATACGCCAACAGCCTGAATTGCTGCCAGCCATGCGAGCGTTCTACCGCAATAACCCAGCGCAGTTCATTATCGATTGGG
GTATGACTACAGACCCGCGCAATCTTGACTACGGGTTGCCGGTATCCATCCCATTTCTGCTGTTCCCAAAACAGGAAGAG
TGGGTTCATTGGATAATGGATCGACGGCGCAATATGGAGAACGGACTGACTGACAAAAGCCGTGAAATGGGTCTGAGTTG
GGTATCAGTCGGACTGAGTTCCACGCTATGCCTGTTCAATAAAGAGATGGTGATTGGGTTCGGTTCACGTAAAGAAGAAT
ACGTAGACAGTACCGGTGACCCCAAGGCCTTGTTTTGGAAGGCCCGCAAATTCATTGAAACTTTACCTGCTGAATTTCGT
GGCTCCTGGGATAACAAGAAACACGCACCGTATATGCGGATCGAGTTCCCGGATAGTGGCTCGATAATCAAAGGAGAGGC
GGGTGATAACATCGGGCGCGGTGACCGCACTACGATGTATTTTGTTGATGAGTCTGCGTTCCTACAGCGACCACTTTTGA
TAGACGCGGCATTGTCACAAACCACACGTTGTCGCATTGATCTCTCGTCAGTCAACGGCATGAATAACCCCTTTGCGCAG
AAACGGCACGGCGGGAAAATACCGGTATTCACATTTCACTGGCGCAGTGACCCGCGCAAGGATGATGCTTGGTATAAGAA
AGAATGTGAAAAAATAGATAACCCGGTCATCGTGGCGCAGGAATTGGACCTCAATTACAACGCCGCTGCTGAGGGTATTC
TAATCCCGTCTGAATGGGTTCAGGCGGCTATCGGTGCGCATACGAAACTGGGTATCACGCCCTCGGGCGCACGTATTGGC
GCATTGGACGTCGCGGATGAAGGGATTGACCTTAACGCCTTCTCCAGCCGAACCGGTGTCTTGCTCGACCGCTTAAAAGC
CTGGTCAGGTAAAGGCTCGGATATTTACGCAACTACGCAAGACGCAATGATATTGAGTGATGAGAATGACTGTGACTATC
TGCTCTATGACTCCGACGGCCTCGGCGCGGGTTGCCGTGGTGATGGTCGCGTTATCAATGAGACGCGACAGAAAGCAGGA
CAGCGGCAGGTTGAGATAAAGCCCTTCCGGGGCAGTGGCGAGGTTATTTACCCGGATAAGCCTGTTTTCAAAGCAGACAC
GAAAAGAGACGCACGAACCAACAAAGACTACTTCGCAAATCGTAAGGCGCAGGGGTGGTGGGCGTTACGGATGAGATTCC
AAGAGGTTTACCGCGCCGTGGTTAAGGGGATGCCTTTTGACCCTGACGAGATAATCAGTATTGACGAAAACCTGCCGGAA
AAAGAAAAGCTGATCGCCGAACTGAGCCAGCCGACTTACACCATTAATGGCGCAGGGAAAGTCACCGTCGATAAAGCGCC
ATCCGGCACTCGGTCGCCCAACCACGCCGATACCGTGATGATTTGCTATGCACCCGAAAAAATTCGGCGTAGCACTTTTG
GGTAG

Upstream 100 bases:

>100_bases
GATAATACGATTAAAATCTAATTAAGTCAATAAAAGTACGATTAAAAGTACGATTTAATTATCGTAATCAATTCGTTTTG
GCTTTCCATGGAGAAACACC

Downstream 100 bases:

>100_bases
TTCGTTTTTTGCTCCATTTAACATAATGACTCTTAAGCGAACTTGTATGCAAAATGCTAAATATTGCTTTCGATACGTTG
CGGCATTGTGTGACGTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MPLPFPFDFKSPDYTQVFEWRMERLQRIRQQPELLPAMRAFYRNNPAQFIIDWGMTTDPRNLDYGLPVSIPFLLFPKQEE
WVHWIMDRRRNMENGLTDKSREMGLSWVSVGLSSTLCLFNKEMVIGFGSRKEEYVDSTGDPKALFWKARKFIETLPAEFR
GSWDNKKHAPYMRIEFPDSGSIIKGEAGDNIGRGDRTTMYFVDESAFLQRPLLIDAALSQTTRCRIDLSSVNGMNNPFAQ
KRHGGKIPVFTFHWRSDPRKDDAWYKKECEKIDNPVIVAQELDLNYNAAAEGILIPSEWVQAAIGAHTKLGITPSGARIG
ALDVADEGIDLNAFSSRTGVLLDRLKAWSGKGSDIYATTQDAMILSDENDCDYLLYDSDGLGAGCRGDGRVINETRQKAG
QRQVEIKPFRGSGEVIYPDKPVFKADTKRDARTNKDYFANRKAQGWWALRMRFQEVYRAVVKGMPFDPDEIISIDENLPE
KEKLIAELSQPTYTINGAGKVTVDKAPSGTRSPNHADTVMICYAPEKIRRSTFG

Sequences:

>Translated_534_residues
MPLPFPFDFKSPDYTQVFEWRMERLQRIRQQPELLPAMRAFYRNNPAQFIIDWGMTTDPRNLDYGLPVSIPFLLFPKQEE
WVHWIMDRRRNMENGLTDKSREMGLSWVSVGLSSTLCLFNKEMVIGFGSRKEEYVDSTGDPKALFWKARKFIETLPAEFR
GSWDNKKHAPYMRIEFPDSGSIIKGEAGDNIGRGDRTTMYFVDESAFLQRPLLIDAALSQTTRCRIDLSSVNGMNNPFAQ
KRHGGKIPVFTFHWRSDPRKDDAWYKKECEKIDNPVIVAQELDLNYNAAAEGILIPSEWVQAAIGAHTKLGITPSGARIG
ALDVADEGIDLNAFSSRTGVLLDRLKAWSGKGSDIYATTQDAMILSDENDCDYLLYDSDGLGAGCRGDGRVINETRQKAG
QRQVEIKPFRGSGEVIYPDKPVFKADTKRDARTNKDYFANRKAQGWWALRMRFQEVYRAVVKGMPFDPDEIISIDENLPE
KEKLIAELSQPTYTINGAGKVTVDKAPSGTRSPNHADTVMICYAPEKIRRSTFG
>Mature_533_residues
PLPFPFDFKSPDYTQVFEWRMERLQRIRQQPELLPAMRAFYRNNPAQFIIDWGMTTDPRNLDYGLPVSIPFLLFPKQEEW
VHWIMDRRRNMENGLTDKSREMGLSWVSVGLSSTLCLFNKEMVIGFGSRKEEYVDSTGDPKALFWKARKFIETLPAEFRG
SWDNKKHAPYMRIEFPDSGSIIKGEAGDNIGRGDRTTMYFVDESAFLQRPLLIDAALSQTTRCRIDLSSVNGMNNPFAQK
RHGGKIPVFTFHWRSDPRKDDAWYKKECEKIDNPVIVAQELDLNYNAAAEGILIPSEWVQAAIGAHTKLGITPSGARIGA
LDVADEGIDLNAFSSRTGVLLDRLKAWSGKGSDIYATTQDAMILSDENDCDYLLYDSDGLGAGCRGDGRVINETRQKAGQ
RQVEIKPFRGSGEVIYPDKPVFKADTKRDARTNKDYFANRKAQGWWALRMRFQEVYRAVVKGMPFDPDEIISIDENLPEK
EKLIAELSQPTYTINGAGKVTVDKAPSGTRSPNHADTVMICYAPEKIRRSTFG

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 60619; Mature: 60488

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPFPFDFKSPDYTQVFEWRMERLQRIRQQPELLPAMRAFYRNNPAQFIIDWGMTTDPR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NLDYGLPVSIPFLLFPKQEEWVHWIMDRRRNMENGLTDKSREMGLSWVSVGLSSTLCLFN
CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHCCCCCCHHHHCCHHHHHHHHHEEEEEC
KEMVIGFGSRKEEYVDSTGDPKALFWKARKFIETLPAEFRGSWDNKKHAPYMRIEFPDSG
CEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCC
SIIKGEAGDNIGRGDRTTMYFVDESAFLQRPLLIDAALSQTTRCRIDLSSVNGMNNPFAQ
CEEECCCCCCCCCCCCEEEEEECCHHHHHCCHHHHHHHCCCEEEEEEHHHCCCCCCCHHH
KRHGGKIPVFTFHWRSDPRKDDAWYKKECEKIDNPVIVAQELDLNYNAAAEGILIPSEWV
HHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEECCHHHH
QAAIGAHTKLGITPSGARIGALDVADEGIDLNAFSSRTGVLLDRLKAWSGKGSDIYATTQ
HHHHCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
DAMILSDENDCDYLLYDSDGLGAGCRGDGRVINETRQKAGQRQVEIKPFRGSGEVIYPDK
CEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCEECCCC
PVFKADTKRDARTNKDYFANRKAQGWWALRMRFQEVYRAVVKGMPFDPDEIISIDENLPE
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCH
KEKLIAELSQPTYTINGAGKVTVDKAPSGTRSPNHADTVMICYAPEKIRRSTFG
HHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEEEECHHHHHHCCCC
>Mature Secondary Structure 
PLPFPFDFKSPDYTQVFEWRMERLQRIRQQPELLPAMRAFYRNNPAQFIIDWGMTTDPR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NLDYGLPVSIPFLLFPKQEEWVHWIMDRRRNMENGLTDKSREMGLSWVSVGLSSTLCLFN
CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHCCCCCCHHHHCCHHHHHHHHHEEEEEC
KEMVIGFGSRKEEYVDSTGDPKALFWKARKFIETLPAEFRGSWDNKKHAPYMRIEFPDSG
CEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCC
SIIKGEAGDNIGRGDRTTMYFVDESAFLQRPLLIDAALSQTTRCRIDLSSVNGMNNPFAQ
CEEECCCCCCCCCCCCEEEEEECCHHHHHCCHHHHHHHCCCEEEEEEHHHCCCCCCCHHH
KRHGGKIPVFTFHWRSDPRKDDAWYKKECEKIDNPVIVAQELDLNYNAAAEGILIPSEWV
HHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEECCHHHH
QAAIGAHTKLGITPSGARIGALDVADEGIDLNAFSSRTGVLLDRLKAWSGKGSDIYATTQ
HHHHCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
DAMILSDENDCDYLLYDSDGLGAGCRGDGRVINETRQKAGQRQVEIKPFRGSGEVIYPDK
CEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCEECCCC
PVFKADTKRDARTNKDYFANRKAQGWWALRMRFQEVYRAVVKGMPFDPDEIISIDENLPE
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCH
KEKLIAELSQPTYTINGAGKVTVDKAPSGTRSPNHADTVMICYAPEKIRRSTFG
HHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEEEECHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]