| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023469
Identifier: 170023469
GI number: 170023469
Start: 1351947
End: 1353485
Strand: Direct
Name: 170023469
Synonym: YPK_1223
Alternate gene names: NA
Gene position: 1351947-1353485 (Clockwise)
Preceding gene: 170023468
Following gene: 170023470
Centisome position: 28.83
GC content: 51.07
Gene sequence:
>1539_bases ATGGGATGGTTTAAACGTAAGAAAAAAGAGGAACAACAAAAGCCAGAGCGAGTGCGTGAAGGGTTCTTTAGTACTCATCG CGAGTCAGACGATAGCGCGACGGCAACCGAGGCGCTACAGGGGAAGATAAGCCACATTGCCAGCACTCAGCCGGTGGCCA AGATAGTTGGCACGATGGACAGCACGGACGGCGGCAGGGCGTTACAGTCCACTCACGTAAGCGGCGGCGGTACGGTCAGT GACAGCCTGTTTATGTGGTATGCGAACAGTAATTTTATCGGCCACACGATGTGCGCCATCATTGCGCAACATTGGCTGAT TTATAAAGCTTGCGCCATGCCGGGCCGTGATGCGATTAGGCAGGGCTATACGATTCAGGGTGAGGGCGGCGAAGAGTTAG ATCCTGAGGCGCTAAAGCTACTAAAGCGCTACGACAAAAAAATGAATATCAATAAACAGATGCGCGATTTCGTCACCTTC GGCCGTATCTTCGGGGTTCGTGTCGCCCTGTTTCGCGTTGAGAGTGACGACGACGAATATTATCAAAACCCGTTTAACGA AGATGGCGTAACGGAGAATAGCTACAAGGGCGTGGTACAGATTGACCCTCAGTGGTGTACGCCTGATTTAGACGCGGAAG GATTAACCGACCCGACGTCGCCTGATTTTTACAATCCAACCCACTGGTTGATTAACGGCAAAAGATATCATCGTTCGCAC CTGATGATATTTATTCCTAATCCCGTCGCCAACATTTTAAAGCCTGGCTATCTGTTCGGCGGCGTACCTGTACCGCAAAA GATAATGGAGCGCGTCTACGCATCAGAACGTACAGCTAACGAAGCTCCACAACTGGCACTTAGCAAGCGAACCACGATAT TTAAAACCGATGCAGCAAAAGCATTATCAAACGAAAGTGCGTTCAATCAGAACATGGCCACCTGGATTAAATACCGCGAC AATTACGGCGTGAAAATTGTTGATAACGAAGAAGATAGCTTAGAGCAGTTTGATACTTCACTTGCCGACTTTGACGCGCT GATCATGACGCAGTATCAGCTTGTCGCGGCAGGTGCTGATGTCCCGGCGACCAAGCTACTCGAAACCCAGCCTAAAGGGT GGGCTAGCTCGGGCGAGTACGAAGAGGCCAGCTATCGAGAGGGACTGGAAAGCCTACAGACCCACGACTTAACCCCGCTA CTGGAGCGACATCACTTACTACTGATGCGCTCACACGTTGCGCCTGAACTCAATATTAAGCCTGTTGAAACTTGTGTTAA TTGGGAGTCGCTCGACTCACCGACCGCCAAAGAATACGCAGAGATTAACGAAATCAACAGCCGTGCAGATTTGAACCTAG TGAATTCCGGCGCGCTCGATCAATACGATGTCCGCGACCGGCTCATAGCCGATAAAAACAGCGGGTATAGCGGTATAGCG CCAGCAGAGCCACCGACAGAGGGGGATCTACCGACACCGACAGAGGGAGGGGGTAATGGCGAAAACACCGAAAAAAATGG CGAGACGCCAACCGCCTAA
Upstream 100 bases:
>100_bases TTTACTTTAACAATCAATCAAATCGTTTGAACGAGAGCCGGGGTTTTTATCCTCGGCTTTTTTGTTTGTGCGATTTGTGG CGCTTGAAGCGAGATCAATG
Downstream 100 bases:
>100_bases GCCCAAGGACGGCATTCTACGTGGCGCAACACTGTTTATGTCAGTCAGTGCAGGGAGCGAATACCAGCACACTGTTACCC GCACCTTCGATCTACTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MGWFKRKKKEEQQKPERVREGFFSTHRESDDSATATEALQGKISHIASTQPVAKIVGTMDSTDGGRALQSTHVSGGGTVS DSLFMWYANSNFIGHTMCAIIAQHWLIYKACAMPGRDAIRQGYTIQGEGGEELDPEALKLLKRYDKKMNINKQMRDFVTF GRIFGVRVALFRVESDDDEYYQNPFNEDGVTENSYKGVVQIDPQWCTPDLDAEGLTDPTSPDFYNPTHWLINGKRYHRSH LMIFIPNPVANILKPGYLFGGVPVPQKIMERVYASERTANEAPQLALSKRTTIFKTDAAKALSNESAFNQNMATWIKYRD NYGVKIVDNEEDSLEQFDTSLADFDALIMTQYQLVAAGADVPATKLLETQPKGWASSGEYEEASYREGLESLQTHDLTPL LERHHLLLMRSHVAPELNIKPVETCVNWESLDSPTAKEYAEINEINSRADLNLVNSGALDQYDVRDRLIADKNSGYSGIA PAEPPTEGDLPTPTEGGGNGENTEKNGETPTA
Sequences:
>Translated_512_residues MGWFKRKKKEEQQKPERVREGFFSTHRESDDSATATEALQGKISHIASTQPVAKIVGTMDSTDGGRALQSTHVSGGGTVS DSLFMWYANSNFIGHTMCAIIAQHWLIYKACAMPGRDAIRQGYTIQGEGGEELDPEALKLLKRYDKKMNINKQMRDFVTF GRIFGVRVALFRVESDDDEYYQNPFNEDGVTENSYKGVVQIDPQWCTPDLDAEGLTDPTSPDFYNPTHWLINGKRYHRSH LMIFIPNPVANILKPGYLFGGVPVPQKIMERVYASERTANEAPQLALSKRTTIFKTDAAKALSNESAFNQNMATWIKYRD NYGVKIVDNEEDSLEQFDTSLADFDALIMTQYQLVAAGADVPATKLLETQPKGWASSGEYEEASYREGLESLQTHDLTPL LERHHLLLMRSHVAPELNIKPVETCVNWESLDSPTAKEYAEINEINSRADLNLVNSGALDQYDVRDRLIADKNSGYSGIA PAEPPTEGDLPTPTEGGGNGENTEKNGETPTA >Mature_511_residues GWFKRKKKEEQQKPERVREGFFSTHRESDDSATATEALQGKISHIASTQPVAKIVGTMDSTDGGRALQSTHVSGGGTVSD SLFMWYANSNFIGHTMCAIIAQHWLIYKACAMPGRDAIRQGYTIQGEGGEELDPEALKLLKRYDKKMNINKQMRDFVTFG RIFGVRVALFRVESDDDEYYQNPFNEDGVTENSYKGVVQIDPQWCTPDLDAEGLTDPTSPDFYNPTHWLINGKRYHRSHL MIFIPNPVANILKPGYLFGGVPVPQKIMERVYASERTANEAPQLALSKRTTIFKTDAAKALSNESAFNQNMATWIKYRDN YGVKIVDNEEDSLEQFDTSLADFDALIMTQYQLVAAGADVPATKLLETQPKGWASSGEYEEASYREGLESLQTHDLTPLL ERHHLLLMRSHVAPELNIKPVETCVNWESLDSPTAKEYAEINEINSRADLNLVNSGALDQYDVRDRLIADKNSGYSGIAP AEPPTEGDLPTPTEGGGNGENTEKNGETPTA
Specific function: Unknown
COG id: COG3567
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57090; Mature: 56959
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWFKRKKKEEQQKPERVREGFFSTHRESDDSATATEALQGKISHIASTQPVAKIVGTMD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCC STDGGRALQSTHVSGGGTVSDSLFMWYANSNFIGHTMCAIIAQHWLIYKACAMPGRDAIR CCCCCCHHHHEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH QGYTIQGEGGEELDPEALKLLKRYDKKMNINKQMRDFVTFGRIFGVRVALFRVESDDDEY CCCEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEEECCCHHH YQNPFNEDGVTENSYKGVVQIDPQWCTPDLDAEGLTDPTSPDFYNPTHWLINGKRYHRSH HCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECE LMIFIPNPVANILKPGYLFGGVPVPQKIMERVYASERTANEAPQLALSKRTTIFKTDAAK EEEEECCCHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECHHHH ALSNESAFNQNMATWIKYRDNYGVKIVDNEEDSLEQFDTSLADFDALIMTQYQLVAAGAD HHCCHHHHHCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC VPATKLLETQPKGWASSGEYEEASYREGLESLQTHDLTPLLERHHLLLMRSHVAPELNIK CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC PVETCVNWESLDSPTAKEYAEINEINSRADLNLVNSGALDQYDVRDRLIADKNSGYSGIA HHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCC PAEPPTEGDLPTPTEGGGNGENTEKNGETPTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GWFKRKKKEEQQKPERVREGFFSTHRESDDSATATEALQGKISHIASTQPVAKIVGTMD CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCC STDGGRALQSTHVSGGGTVSDSLFMWYANSNFIGHTMCAIIAQHWLIYKACAMPGRDAIR CCCCCCHHHHEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH QGYTIQGEGGEELDPEALKLLKRYDKKMNINKQMRDFVTFGRIFGVRVALFRVESDDDEY CCCEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEEECCCHHH YQNPFNEDGVTENSYKGVVQIDPQWCTPDLDAEGLTDPTSPDFYNPTHWLINGKRYHRSH HCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECE LMIFIPNPVANILKPGYLFGGVPVPQKIMERVYASERTANEAPQLALSKRTTIFKTDAAK EEEEECCCHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECHHHH ALSNESAFNQNMATWIKYRDNYGVKIVDNEEDSLEQFDTSLADFDALIMTQYQLVAAGAD HHCCHHHHHCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC VPATKLLETQPKGWASSGEYEEASYREGLESLQTHDLTPLLERHHLLLMRSHVAPELNIK CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC PVETCVNWESLDSPTAKEYAEINEINSRADLNLVNSGALDQYDVRDRLIADKNSGYSGIA HHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCC PAEPPTEGDLPTPTEGGGNGENTEKNGETPTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA