| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630922
Identifier: 169630922
GI number: 169630922
Start: 3889385
End: 3890266
Strand: Direct
Name: 169630922
Synonym: MAB_3843
Alternate gene names: NA
Gene position: 3889385-3890266 (Clockwise)
Preceding gene: 169630921
Following gene: 169630925
Centisome position: 76.76
GC content: 65.19
Gene sequence:
>882_bases ATGACCGTCGTCGTCGGATACCTTTCGGGCAAGGGCGGCAAGGGCGCCCTGCACCTGGCGGTCGAATCTGCTCGTGTACT GGAAACCTCGCTCACTGTCACCACCGTGGTACCGAAGCCGTGGACCACATTGTCCAAGGCCAAGATCGACGCCGAGTACG CACAATGGGCACAGAAGCTTTCCGACGATTCCAAGTCCGAGGCCACTGCCTACCTTGAAAAGATCGGTGCCGGAATCGAT GTCACCTTCCACAATGTGGCGCACCGCTCGGTGTCCGGCGGCCTGCTGGAGGCTGTCGAAGCATCCGATGCCGACGTGCT AGTCGTCGGCTCGGCTTCCGAGGGACGCCTGGGGCAAGTGGTTCTGGGATCCACCGGAGACCGGCTGCTGCACTCCTCCC CGGTCCCGCTGGCCATCAGCCCGCGTGGCTACCGCGGGTCGAGGGCCGGTACCGTCAGCCGGGTCACGTGTGGATATCCC GGCACAGAAGATGCGGTCGACGTTGTGCAACAAGCAGTTCGGCTGACCCAGCGCCTACATGCGCCGCTGCGCGTGGTCAC CTTCGCGGTACGTGGGCGCACCATGCTCACCGCCGGCGTCGGTCCCGAAGCCGAGGATGCGGTGCTCGCAAGCTGGGTCA CCCAGTCCGAGGAAGCATTGTCGGAACTGCGCCAAGCCGGCATCGTCACGGCCGATGTGGAGCTGAAGGTCGTCACCGGC GATACCTGGGATGACGCGCTGGACAACGCCGAATGGAACGATGGCGAGCTGTTGGTTCTCGGCAGCCGGCCACACAGCGC CGTGGCCCGCGTCTTCCTGGGGTCCCGTGCGACGAAGATCGTCAGGCACAGCCCGGTCCCTGTCGTGGTGATGCCGGGCT AG
Upstream 100 bases:
>100_bases TTGCCATCGTGCTGGTGTTCTATTTGGTGTGGGGCCGGCACCACAGCGCGCTGAACGACCTGCCCAGCGACCCAGCAGAA TTATCGGAGAAGGAACCGGT
Downstream 100 bases:
>100_bases CCCAGGCGTCAGTACGTCAGGTGTCCCTTGTCCACTGGTACCTGGGCACCGGCCAGCGTGCCCGACGCGTCGCTGGCCAG CCACAGCACCACATCGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: USP Rv2319c [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTVVVGYLSGKGGKGALHLAVESARVLETSLTVTTVVPKPWTTLSKAKIDAEYAQWAQKLSDDSKSEATAYLEKIGAGID VTFHNVAHRSVSGGLLEAVEASDADVLVVGSASEGRLGQVVLGSTGDRLLHSSPVPLAISPRGYRGSRAGTVSRVTCGYP GTEDAVDVVQQAVRLTQRLHAPLRVVTFAVRGRTMLTAGVGPEAEDAVLASWVTQSEEALSELRQAGIVTADVELKVVTG DTWDDALDNAEWNDGELLVLGSRPHSAVARVFLGSRATKIVRHSPVPVVVMPG
Sequences:
>Translated_293_residues MTVVVGYLSGKGGKGALHLAVESARVLETSLTVTTVVPKPWTTLSKAKIDAEYAQWAQKLSDDSKSEATAYLEKIGAGID VTFHNVAHRSVSGGLLEAVEASDADVLVVGSASEGRLGQVVLGSTGDRLLHSSPVPLAISPRGYRGSRAGTVSRVTCGYP GTEDAVDVVQQAVRLTQRLHAPLRVVTFAVRGRTMLTAGVGPEAEDAVLASWVTQSEEALSELRQAGIVTADVELKVVTG DTWDDALDNAEWNDGELLVLGSRPHSAVARVFLGSRATKIVRHSPVPVVVMPG >Mature_292_residues TVVVGYLSGKGGKGALHLAVESARVLETSLTVTTVVPKPWTTLSKAKIDAEYAQWAQKLSDDSKSEATAYLEKIGAGIDV TFHNVAHRSVSGGLLEAVEASDADVLVVGSASEGRLGQVVLGSTGDRLLHSSPVPLAISPRGYRGSRAGTVSRVTCGYPG TEDAVDVVQQAVRLTQRLHAPLRVVTFAVRGRTMLTAGVGPEAEDAVLASWVTQSEEALSELRQAGIVTADVELKVVTGD TWDDALDNAEWNDGELLVLGSRPHSAVARVFLGSRATKIVRHSPVPVVVMPG
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 30794; Mature: 30663
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVVGYLSGKGGKGALHLAVESARVLETSLTVTTVVPKPWTTLSKAKIDAEYAQWAQKL CEEEEEEEECCCCCCEEEEEECCCHHEEEEEEEEEECCCCCCCHHHHHCCHHHHHHHHHH SDDSKSEATAYLEKIGAGIDVTFHNVAHRSVSGGLLEAVEASDADVLVVGSASEGRLGQV CCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCEEE VLGSTGDRLLHSSPVPLAISPRGYRGSRAGTVSRVTCGYPGTEDAVDVVQQAVRLTQRLH EECCCCCHHHCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC APLRVVTFAVRGRTMLTAGVGPEAEDAVLASWVTQSEEALSELRQAGIVTADVELKVVTG CCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEEEEEEEC DTWDDALDNAEWNDGELLVLGSRPHSAVARVFLGSRATKIVRHSPVPVVVMPG CCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCEEEECC >Mature Secondary Structure TVVVGYLSGKGGKGALHLAVESARVLETSLTVTTVVPKPWTTLSKAKIDAEYAQWAQKL EEEEEEEECCCCCCEEEEEECCCHHEEEEEEEEEECCCCCCCHHHHHCCHHHHHHHHHH SDDSKSEATAYLEKIGAGIDVTFHNVAHRSVSGGLLEAVEASDADVLVVGSASEGRLGQV CCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCEEE VLGSTGDRLLHSSPVPLAISPRGYRGSRAGTVSRVTCGYPGTEDAVDVVQQAVRLTQRLH EECCCCCHHHCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC APLRVVTFAVRGRTMLTAGVGPEAEDAVLASWVTQSEEALSELRQAGIVTADVELKVVTG CCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEEEEEEEC DTWDDALDNAEWNDGELLVLGSRPHSAVARVFLGSRATKIVRHSPVPVVVMPG CCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]