| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630925
Identifier: 169630925
GI number: 169630925
Start: 3892137
End: 3893519
Strand: Direct
Name: 169630925
Synonym: MAB_3846
Alternate gene names: NA
Gene position: 3892137-3893519 (Clockwise)
Preceding gene: 169630922
Following gene: 169630926
Centisome position: 76.81
GC content: 64.5
Gene sequence:
>1383_bases ATGCCCAAGCTCACCGCAGTCGATCGACCGCTCCCCGGCAAGCCACACCCATACGACTACTACTACCGGCCAGGGATGGA TCTGCGGCCGATTCCCGAGGGCAAGAACGAGTTCGGCTGGATTTGGCGCCATTGCCGACACGTCCTGTTCGATGATTGGT TCGATGTCGAGGACCACGTCACCCCGACCCCGCTCACACGCATTTTCGACGACCACATGTGGCAAGGCGACGAGTTGATG GATGCCGTGGTGGTCATGTTCGAACGGCTCGGATCCGCGCAGGCACGGCCCCTTTTCGAACGGGCCATCACCGACGGCAT CGAGTCCCTGGACGACCCTCCGGAAGAGCTGCGCGTCCTCCTGGAGGACGCATACCGGGTCCCGGCTTGGTGGGATCCGG CCAAGGCAGAGCGCGGGCGCGTGCGCCTCAATCAAATGTCCGCACCCACAATGCTTTTGATGACATCCTTCGGCGTCTTC GACACCGTGATGAACTCGGACGTATCGGCCACCACCGGCGCCTCCGGCCGCTTCCGGGACCAGGGTCAACAACGCCTCCT CGAGACGGCGCGCTTCTTCGCGGCACTGCGTGACCGTGATGCCATGCGGCCCGGCTCATGGCAGATGCAGATGACATTGC GAGTGCGCCTCGTACATTCCCTGGCCCGCAAAGGCCTTCGTTCCGCCTGGGGGCCGGATAATTTCGCCGACTTCGGTGTG CCCATCTCCAACTCGTCAATGTGCGGATTCATCGAGGCCGAATCACTGGGGCAGATGCTCATCGAGCATCGGTTCGGACG GCCGTGCACCCTCGACGAGCTCGATGACGCCTGGCATTACATGACGCGCTGGGCATTACTCTTCGGCATCACCGAGCAGA TGTGCCCCAAGACCGGCGCGGACGCCATGCGCAATCTCGACTACCTGCTGGCGCGCTCGGGAGATGCCTCACGCTGGCGC GTTGAACTCGTCGAAGTGCTGTCCGCACTGCCCTCGGCCGTCATCGCCCCCGTGCCCATGGAGCGTTTCCGGAAGCTGCT CAGCGACGTGATGTTCGTGGCAGGAATTGGCGCACCCGGTTGGGTCCTCTTGGGCCCCAAGGCGATGGATGAATTCGTCC GCGGCACCAGCTATGAGCGGCTCCCCCGCAGGCTCCCCGGCATGGCCCTACACGCCGCGATGTCCGCGGCTGCCCGACTG GCCGCGGTCCGCGATCGGGTGCCCGGCACGCACCTGGCCCGCAGGATCGTCTACGGGACACTGCTCCCCAACCCGAGCAC CATGATGAATCCGGCGTTCGGCCTCCTCGAGCGGCTCAACAGGGTGAACTCGACCTACACCATGCACGACAACAACACGG CCGGGCACGCCTTTGCCCGCTAG
Upstream 100 bases:
>100_bases TCCTCCAGTTGCCCGGTGTCTTGTGCCCGATCGACGCAGCACCTAAAATTGGCAATGGATGTTGTCAACGATGCCGGCAC CACCGACAGGAGGCACTCGC
Downstream 100 bases:
>100_bases ACCGGAACCTCACCTCTTGTGAGCCCCTCTCCGGCGGCCTAATATTGACAATGCACGTTGTCAATGATGTCAACGTAAAT CTCAGGAGGCGCTCGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MPKLTAVDRPLPGKPHPYDYYYRPGMDLRPIPEGKNEFGWIWRHCRHVLFDDWFDVEDHVTPTPLTRIFDDHMWQGDELM DAVVVMFERLGSAQARPLFERAITDGIESLDDPPEELRVLLEDAYRVPAWWDPAKAERGRVRLNQMSAPTMLLMTSFGVF DTVMNSDVSATTGASGRFRDQGQQRLLETARFFAALRDRDAMRPGSWQMQMTLRVRLVHSLARKGLRSAWGPDNFADFGV PISNSSMCGFIEAESLGQMLIEHRFGRPCTLDELDDAWHYMTRWALLFGITEQMCPKTGADAMRNLDYLLARSGDASRWR VELVEVLSALPSAVIAPVPMERFRKLLSDVMFVAGIGAPGWVLLGPKAMDEFVRGTSYERLPRRLPGMALHAAMSAAARL AAVRDRVPGTHLARRIVYGTLLPNPSTMMNPAFGLLERLNRVNSTYTMHDNNTAGHAFAR
Sequences:
>Translated_460_residues MPKLTAVDRPLPGKPHPYDYYYRPGMDLRPIPEGKNEFGWIWRHCRHVLFDDWFDVEDHVTPTPLTRIFDDHMWQGDELM DAVVVMFERLGSAQARPLFERAITDGIESLDDPPEELRVLLEDAYRVPAWWDPAKAERGRVRLNQMSAPTMLLMTSFGVF DTVMNSDVSATTGASGRFRDQGQQRLLETARFFAALRDRDAMRPGSWQMQMTLRVRLVHSLARKGLRSAWGPDNFADFGV PISNSSMCGFIEAESLGQMLIEHRFGRPCTLDELDDAWHYMTRWALLFGITEQMCPKTGADAMRNLDYLLARSGDASRWR VELVEVLSALPSAVIAPVPMERFRKLLSDVMFVAGIGAPGWVLLGPKAMDEFVRGTSYERLPRRLPGMALHAAMSAAARL AAVRDRVPGTHLARRIVYGTLLPNPSTMMNPAFGLLERLNRVNSTYTMHDNNTAGHAFAR >Mature_459_residues PKLTAVDRPLPGKPHPYDYYYRPGMDLRPIPEGKNEFGWIWRHCRHVLFDDWFDVEDHVTPTPLTRIFDDHMWQGDELMD AVVVMFERLGSAQARPLFERAITDGIESLDDPPEELRVLLEDAYRVPAWWDPAKAERGRVRLNQMSAPTMLLMTSFGVFD TVMNSDVSATTGASGRFRDQGQQRLLETARFFAALRDRDAMRPGSWQMQMTLRVRLVHSLARKGLRSAWGPDNFADFGVP ISNSSMCGFIEAESLGQMLIEHRFGRPCTLDELDDAWHYMTRWALLFGITEQMCPKTGADAMRNLDYLLARSGDASRWRV ELVEVLSALPSAVIAPVPMERFRKLLSDVMFVAGIGAPGWVLLGPKAMDEFVRGTSYERLPRRLPGMALHAAMSAAARLA AVRDRVPGTHLARRIVYGTLLPNPSTMMNPAFGLLERLNRVNSTYTMHDNNTAGHAFAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52067; Mature: 51935
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLTAVDRPLPGKPHPYDYYYRPGMDLRPIPEGKNEFGWIWRHCRHVLFDDWFDVEDHV CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC TPTPLTRIFDDHMWQGDELMDAVVVMFERLGSAQARPLFERAITDGIESLDDPPEELRVL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LEDAYRVPAWWDPAKAERGRVRLNQMSAPTMLLMTSFGVFDTVMNSDVSATTGASGRFRD HHHHHCCCCCCCCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH QGQQRLLETARFFAALRDRDAMRPGSWQMQMTLRVRLVHSLARKGLRSAWGPDNFADFGV HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC PISNSSMCGFIEAESLGQMLIEHRFGRPCTLDELDDAWHYMTRWALLFGITEQMCPKTGA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DAMRNLDYLLARSGDASRWRVELVEVLSALPSAVIAPVPMERFRKLLSDVMFVAGIGAPG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC WVLLGPKAMDEFVRGTSYERLPRRLPGMALHAAMSAAARLAAVRDRVPGTHLARRIVYGT EEEECHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLPNPSTMMNPAFGLLERLNRVNSTYTMHDNNTAGHAFAR CCCCCHHHHCHHHHHHHHHHHCCCEEEECCCCCCCCCCCC >Mature Secondary Structure PKLTAVDRPLPGKPHPYDYYYRPGMDLRPIPEGKNEFGWIWRHCRHVLFDDWFDVEDHV CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC TPTPLTRIFDDHMWQGDELMDAVVVMFERLGSAQARPLFERAITDGIESLDDPPEELRVL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LEDAYRVPAWWDPAKAERGRVRLNQMSAPTMLLMTSFGVFDTVMNSDVSATTGASGRFRD HHHHHCCCCCCCCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH QGQQRLLETARFFAALRDRDAMRPGSWQMQMTLRVRLVHSLARKGLRSAWGPDNFADFGV HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC PISNSSMCGFIEAESLGQMLIEHRFGRPCTLDELDDAWHYMTRWALLFGITEQMCPKTGA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DAMRNLDYLLARSGDASRWRVELVEVLSALPSAVIAPVPMERFRKLLSDVMFVAGIGAPG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC WVLLGPKAMDEFVRGTSYERLPRRLPGMALHAAMSAAARLAAVRDRVPGTHLARRIVYGT EEEECHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLPNPSTMMNPAFGLLERLNRVNSTYTMHDNNTAGHAFAR CCCCCHHHHCHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA