| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630542
Identifier: 169630542
GI number: 169630542
Start: 3505525
End: 3505953
Strand: Reverse
Name: 169630542
Synonym: MAB_3461c
Alternate gene names: NA
Gene position: 3505953-3505525 (Counterclockwise)
Preceding gene: 169630543
Following gene: 169630541
Centisome position: 69.19
GC content: 58.51
Gene sequence:
>429_bases ATGACCGAGACAGACCCCCATGATTTCCATGCCAATGTCATGTCGGAGATCCGTGAAACGGGCAGAGCCAGTGGATTCTT TGCCCAGTTCGACATGTTGATTCTGCATACCGTCGGTGCAAAGTCGGGCCAGCCGCGTCAAAACCCCATGGCCTACCAGC CGGGAGGAGAAGGCGGCGAATTCTATGTCTTCGCCTCCAACAACGGGCGGGATACGAGCTCTGCCTGGTACTACAACGCA CTTGCCCATCCGGATCGAGTCGAAGTCGAGATCGGCGACGATCGCTTCCGGGTGTCAGTTCGTGACGTGGTGGGGCAGGA GCGAGACCGAATCTATGCGCGGCAGGCGGGCAAGTTCGAAAATTTCGCGGAGTACGAACGTAAGACGACTCGAGTGATCC CGGTGCTGGGCCTGACGCGCGTGGATTAG
Upstream 100 bases:
>100_bases GTCACGGGGGAGACGGTCGACGCCGCGTTTGTTGACAGGATTGTCGAGGATTTCTTGCGCCGCCGGGAATAATGTCAGCT CGATTGACATTATGGTGATT
Downstream 100 bases:
>100_bases CGGGTGCGACAGCTGGATTCACAAGGACTTCACAGCCGCGGCTAGCAGGACGCGCCGGAAATTGCGGTGCCAGCTTGTCG GGTTTTTGTCGACTGGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTETDPHDFHANVMSEIRETGRASGFFAQFDMLILHTVGAKSGQPRQNPMAYQPGGEGGEFYVFASNNGRDTSSAWYYNA LAHPDRVEVEIGDDRFRVSVRDVVGQERDRIYARQAGKFENFAEYERKTTRVIPVLGLTRVD
Sequences:
>Translated_142_residues MTETDPHDFHANVMSEIRETGRASGFFAQFDMLILHTVGAKSGQPRQNPMAYQPGGEGGEFYVFASNNGRDTSSAWYYNA LAHPDRVEVEIGDDRFRVSVRDVVGQERDRIYARQAGKFENFAEYERKTTRVIPVLGLTRVD >Mature_141_residues TETDPHDFHANVMSEIRETGRASGFFAQFDMLILHTVGAKSGQPRQNPMAYQPGGEGGEFYVFASNNGRDTSSAWYYNAL AHPDRVEVEIGDDRFRVSVRDVVGQERDRIYARQAGKFENFAEYERKTTRVIPVLGLTRVD
Specific function: May be involved in the activation of oxazole analogs [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deazaflavin-dependent nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004378 [H]
Pfam domain/function: PF04075 DUF385 [H]
EC number: NA
Molecular weight: Translated: 16094; Mature: 15963
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETDPHDFHANVMSEIRETGRASGFFAQFDMLILHTVGAKSGQPRQNPMAYQPGGEGGE CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE FYVFASNNGRDTSSAWYYNALAHPDRVEVEIGDDRFRVSVRDVVGQERDRIYARQAGKFE EEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEHHHHHCCHHHHHHHHHCCCCH NFAEYERKTTRVIPVLGLTRVD HHHHHHHHHCEEEEECCEEECC >Mature Secondary Structure TETDPHDFHANVMSEIRETGRASGFFAQFDMLILHTVGAKSGQPRQNPMAYQPGGEGGE CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE FYVFASNNGRDTSSAWYYNALAHPDRVEVEIGDDRFRVSVRDVVGQERDRIYARQAGKFE EEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEHHHHHCCHHHHHHHHHCCCCH NFAEYERKTTRVIPVLGLTRVD HHHHHHHHHCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]