Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169630541

Identifier: 169630541

GI number: 169630541

Start: 3503826

End: 3505352

Strand: Reverse

Name: 169630541

Synonym: MAB_3460c

Alternate gene names: NA

Gene position: 3505352-3503826 (Counterclockwise)

Preceding gene: 169630542

Following gene: 169630539

Centisome position: 69.18

GC content: 62.54

Gene sequence:

>1527_bases
ATGGTTGTCGGTGCGGTCGCCGCGTTTGTCATGGCCATCACGGGCTTTGGCTGGGCCGGATACAACACGGCGGTGGGTCA
GATCATCACCTCGCATGTGCTTCCGGGTGTGCTCACTCCGGTGGGGCAAGACCAAAACATTCTGCTCATGGGGCTAGATA
GCAGGCTTGATCAGAACGGGCAGCCGTTGCCGCAGGATATGTACGACGCATTGCACGCCGGTGATGAGACATCGGGCGGT
TACAACGCGAATGTGTTGATCGTGGTCCACATTCCCGGCAACGGCGGCCCCATCAGTGCGGTGTCGATCCCGCGAGACGA
TTATGTCAATCTTGTCGGCTGCCCCGGCTCGGTGTGCAAGGGCAAGGTCAAGCAGGCCTATGGATTTGCCTACCAGCAGG
CGTTGGACGCCCAGGCGAACGGCAGCGCCGATGCTGCCGGTGCCAAAGATCTGACCGCCCGCGAACAGGCGGCGCGGGAG
GCGGGGCGCAAGGCCCAGATTGACACGGTGAGTGAATTCCTGGGTGTGCAGATCGATCACTTCGTCGAAGTGACGCTCGC
CGCGTTCTTTCAGATCGCCAAGACCGTGCAGCCGATCGCGGTCTGCCTCAACCACGACACGATCGATGAGTTCTCCGGCG
CCAACTTCCATGAAGGTGTTCAACAGATCGACGCATCGCAAGCGATGGCTTTCGTCCGGCAGCGCCGGGACGAAAACGAC
GGTTCGTTCACCGATATGGACCGCACCCGTCGTCAGCAGGCATTTCTGGTATCGCTGCTCGCCGCGGTGCGTCAGGGGGG
AGCAATGTCGAATCCCGCTGCGATACGCAACATCCTCAATGTCGCGCATGAAAACGTCGCGATCGATTCCGGACTGAACA
TTGTTGATTTCGCTGCGCGTGCCTCGGAATTGACCAAGCGGCCGACATCTTTCTACACGTTGCCCATCTCCGACTTCGGT
GCCGATTCCAACGGCTCGGACGTCAATATCGTCGATCTGCCGACGATCCGGCAGATTGTCCACGACCGTTTCTCCTCAGA
TCCCGTACCCGAGGCACCGAGCGCCGCCGCGGCGTCCGCGCCGCCAGCGCTGTCCACGCCCGTGGTGCTCAATGTCGTCA
ACGCGACATCGCGCGACGGGTTGGCTGCCGCAGTCGAGGATGCTTTTACCGCCAGAGGATTCACGCGTGGTCGGGCATCG
ACAGCGGAGACCCAGTCCACCGAGAGTTCCATCATGTACGGCGAGGACGCGCAAGAGGGTGCGCAGGCGCTTGCCGATCA
GCTGCACCTGCCCATGACGGAATCCGGCGCGGTTGCACCCGGAACCGTGCAGCTGACCGTGGGATCGCAGTTCCCCGTGG
ACAACTACATCGCGCATCACAGCGGTGGTGCCAAGGGCGGCTCGTCAGGGGAAGCCGACCCCGCCGACAAGATGACCGCG
GTCGCGGCGACGGGGACCGGCGTGCAAGCGCCGGCACCCACCGATCTGAGTCAGCTCACCGCGAACGGCATTCCCTGCGT
CAAGTGA

Upstream 100 bases:

>100_bases
GCTTGTCGGGTTTTTGTCGACTGGTACAGAACAATGGTCAATTGTTATGAGCAGACCGGATTCTGGCCAGTCACAGCGCT
GGGTGCTGTCGAAGGGCCGC

Downstream 100 bases:

>100_bases
CTTGTGTGCCGATCATGCATCCCCGAGGAATCGGACATGCAGGGCGCGCACATCTTCCGCGAGATCTGGTGCGGGACCGT
CGGTCTGGACACCGGGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Envelope-Related Transcriptional Attenuator; LytR Family Transcriptional Regulator; Secreted Protein; LytR Family Regulatory Protein; Transcriptional Regulator-Like Protein; Lytr Family Transcriptional Regulator; Cell Envelope-Like Function Transcriptional Attenuator; Cell Envelope-Related Function Transcriptional Attenuator; Transcriptional Regulator LytR Family Protein; Transcriptional Regulatory Protein; Membrane-Bound Transcriptional Regulator; Transcriptional Regulator LytR Family

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MVVGAVAAFVMAITGFGWAGYNTAVGQIITSHVLPGVLTPVGQDQNILLMGLDSRLDQNGQPLPQDMYDALHAGDETSGG
YNANVLIVVHIPGNGGPISAVSIPRDDYVNLVGCPGSVCKGKVKQAYGFAYQQALDAQANGSADAAGAKDLTAREQAARE
AGRKAQIDTVSEFLGVQIDHFVEVTLAAFFQIAKTVQPIAVCLNHDTIDEFSGANFHEGVQQIDASQAMAFVRQRRDEND
GSFTDMDRTRRQQAFLVSLLAAVRQGGAMSNPAAIRNILNVAHENVAIDSGLNIVDFAARASELTKRPTSFYTLPISDFG
ADSNGSDVNIVDLPTIRQIVHDRFSSDPVPEAPSAAAASAPPALSTPVVLNVVNATSRDGLAAAVEDAFTARGFTRGRAS
TAETQSTESSIMYGEDAQEGAQALADQLHLPMTESGAVAPGTVQLTVGSQFPVDNYIAHHSGGAKGGSSGEADPADKMTA
VAATGTGVQAPAPTDLSQLTANGIPCVK

Sequences:

>Translated_508_residues
MVVGAVAAFVMAITGFGWAGYNTAVGQIITSHVLPGVLTPVGQDQNILLMGLDSRLDQNGQPLPQDMYDALHAGDETSGG
YNANVLIVVHIPGNGGPISAVSIPRDDYVNLVGCPGSVCKGKVKQAYGFAYQQALDAQANGSADAAGAKDLTAREQAARE
AGRKAQIDTVSEFLGVQIDHFVEVTLAAFFQIAKTVQPIAVCLNHDTIDEFSGANFHEGVQQIDASQAMAFVRQRRDEND
GSFTDMDRTRRQQAFLVSLLAAVRQGGAMSNPAAIRNILNVAHENVAIDSGLNIVDFAARASELTKRPTSFYTLPISDFG
ADSNGSDVNIVDLPTIRQIVHDRFSSDPVPEAPSAAAASAPPALSTPVVLNVVNATSRDGLAAAVEDAFTARGFTRGRAS
TAETQSTESSIMYGEDAQEGAQALADQLHLPMTESGAVAPGTVQLTVGSQFPVDNYIAHHSGGAKGGSSGEADPADKMTA
VAATGTGVQAPAPTDLSQLTANGIPCVK
>Mature_508_residues
MVVGAVAAFVMAITGFGWAGYNTAVGQIITSHVLPGVLTPVGQDQNILLMGLDSRLDQNGQPLPQDMYDALHAGDETSGG
YNANVLIVVHIPGNGGPISAVSIPRDDYVNLVGCPGSVCKGKVKQAYGFAYQQALDAQANGSADAAGAKDLTAREQAARE
AGRKAQIDTVSEFLGVQIDHFVEVTLAAFFQIAKTVQPIAVCLNHDTIDEFSGANFHEGVQQIDASQAMAFVRQRRDEND
GSFTDMDRTRRQQAFLVSLLAAVRQGGAMSNPAAIRNILNVAHENVAIDSGLNIVDFAARASELTKRPTSFYTLPISDFG
ADSNGSDVNIVDLPTIRQIVHDRFSSDPVPEAPSAAAASAPPALSTPVVLNVVNATSRDGLAAAVEDAFTARGFTRGRAS
TAETQSTESSIMYGEDAQEGAQALADQLHLPMTESGAVAPGTVQLTVGSQFPVDNYIAHHSGGAKGGSSGEADPADKMTA
VAATGTGVQAPAPTDLSQLTANGIPCVK

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52844; Mature: 52844

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGAVAAFVMAITGFGWAGYNTAVGQIITSHVLPGVLTPVGQDQNILLMGLDSRLDQNG
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHCCCCC
QPLPQDMYDALHAGDETSGGYNANVLIVVHIPGNGGPISAVSIPRDDYVNLVGCPGSVCK
CCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCEEECCCCHHHH
GKVKQAYGFAYQQALDAQANGSADAAGAKDLTAREQAAREAGRKAQIDTVSEFLGVQIDH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
FVEVTLAAFFQIAKTVQPIAVCLNHDTIDEFSGANFHEGVQQIDASQAMAFVRQRRDEND
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GSFTDMDRTRRQQAFLVSLLAAVRQGGAMSNPAAIRNILNVAHENVAIDSGLNIVDFAAR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECCCCCHHHHHHH
ASELTKRPTSFYTLPISDFGADSNGSDVNIVDLPTIRQIVHDRFSSDPVPEAPSAAAASA
HHHHHCCCCCEEEEECHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCC
PPALSTPVVLNVVNATSRDGLAAAVEDAFTARGFTRGRASTAETQSTESSIMYGEDAQEG
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEECCCHHHH
AQALADQLHLPMTESGAVAPGTVQLTVGSQFPVDNYIAHHSGGAKGGSSGEADPADKMTA
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHEEE
VAATGTGVQAPAPTDLSQLTANGIPCVK
EEECCCCCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MVVGAVAAFVMAITGFGWAGYNTAVGQIITSHVLPGVLTPVGQDQNILLMGLDSRLDQNG
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHCCCCC
QPLPQDMYDALHAGDETSGGYNANVLIVVHIPGNGGPISAVSIPRDDYVNLVGCPGSVCK
CCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCEEECCCCHHHH
GKVKQAYGFAYQQALDAQANGSADAAGAKDLTAREQAAREAGRKAQIDTVSEFLGVQIDH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
FVEVTLAAFFQIAKTVQPIAVCLNHDTIDEFSGANFHEGVQQIDASQAMAFVRQRRDEND
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GSFTDMDRTRRQQAFLVSLLAAVRQGGAMSNPAAIRNILNVAHENVAIDSGLNIVDFAAR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECCCCCHHHHHHH
ASELTKRPTSFYTLPISDFGADSNGSDVNIVDLPTIRQIVHDRFSSDPVPEAPSAAAASA
HHHHHCCCCCEEEEECHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCC
PPALSTPVVLNVVNATSRDGLAAAVEDAFTARGFTRGRASTAETQSTESSIMYGEDAQEG
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEECCCHHHH
AQALADQLHLPMTESGAVAPGTVQLTVGSQFPVDNYIAHHSGGAKGGSSGEADPADKMTA
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHEEE
VAATGTGVQAPAPTDLSQLTANGIPCVK
EEECCCCCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA