| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630489
Identifier: 169630489
GI number: 169630489
Start: 3455691
End: 3456428
Strand: Reverse
Name: 169630489
Synonym: MAB_3408c
Alternate gene names: NA
Gene position: 3456428-3455691 (Counterclockwise)
Preceding gene: 169630490
Following gene: 169630485
Centisome position: 68.21
GC content: 67.75
Gene sequence:
>738_bases GTGACCCCCGACGAATGGTTGGAAGCACTGCGCAAGGGGATCGCGGCCGTCGCCGCGACCCCGCCCGAATATCTCACCCA GGACGCGCCATCCTGCCCGGGATGGACGGCGCGCGATCTGGTCGCTCACCTGGGCGGCGTACACCGCTGGGCGGTGGGAG TCATTGTCGGCCAAAAGGTTCCGTACACAGACCTGGACCCCGAGGCGCCGGCGGGGGAGGACGTCCTCGAGTGGTACACC GAGCGAGCCGACAAGCTGATTGCCACGCTGGCCTCGAGTGACCTTGACGCGCCGACGAAGTCGCCTTTCGGCGAGCGGCC GGTGCGGTTCTGGTTCCGTCGTCAGGCTCAGGAGGTGGCGGTGCACCGCTGGGATATTGGGCACGCCTATCGCGGCTGGG ATGTCGATCCCCTCGACGCGGCACTGGCGACAGACGGGATCGGCGAGTGGTCGGAGGTTTTCACGCCCCGGCGCATCGGG CGCGATGGCGGCACCCCGGAAGAGCTACGGGGAGTGCGAATACTCCTGAAAGCCGACGACGCCGCCGGTTCCTGGCTGCT ACGGGCTGACGCGGACAGTATCGGCATCGTGGATGACGACGGCGCACCGGACGCCACCATCACGGCGTCGACGTCCGATC TGCTTCTGGCGCTGTGGCACCGGGTTCCCTTGTCGCGCTTGGCGGTCGACGGGGATGCCGCCCACGTTGAGCGCGTACTC GACCTAGTCCGAATTTGA
Upstream 100 bases:
>100_bases GCGGGCAAGGTCGCCCGCGACCCAGGCCGACCGAAGCGTGGTCGGCGCTGAGCCTGAAAATCGTCGCGAGATTCAGGCTC GTCAGTGATCTAATGACCGC
Downstream 100 bases:
>100_bases GACGGGGGAGCTCACGCGCCGCGCCACCCAGGTGCTGACGGTGGAGACAACCAGAAGGACCAACCCGACCCACAGTGCGT CGAGCCCGATGCGGTGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVGQKVPYTDLDPEAPAGEDVLEWYT ERADKLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVAVHRWDIGHAYRGWDVDPLDAALATDGIGEWSEVFTPRRIG RDGGTPEELRGVRILLKADDAAGSWLLRADADSIGIVDDDGAPDATITASTSDLLLALWHRVPLSRLAVDGDAAHVERVL DLVRI
Sequences:
>Translated_245_residues MTPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVGQKVPYTDLDPEAPAGEDVLEWYT ERADKLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVAVHRWDIGHAYRGWDVDPLDAALATDGIGEWSEVFTPRRIG RDGGTPEELRGVRILLKADDAAGSWLLRADADSIGIVDDDGAPDATITASTSDLLLALWHRVPLSRLAVDGDAAHVERVL DLVRI >Mature_244_residues TPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVGQKVPYTDLDPEAPAGEDVLEWYTE RADKLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVAVHRWDIGHAYRGWDVDPLDAALATDGIGEWSEVFTPRRIGR DGGTPEELRGVRILLKADDAAGSWLLRADADSIGIVDDDGAPDATITASTSDLLLALWHRVPLSRLAVDGDAAHVERVLD LVRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26754; Mature: 26623
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVGQKV CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCC PYTDLDPEAPAGEDVLEWYTERADKLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH VHRWDIGHAYRGWDVDPLDAALATDGIGEWSEVFTPRRIGRDGGTPEELRGVRILLKADD HHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCHHHCCCCCCHHHHCCEEEEEEECC AAGSWLLRADADSIGIVDDDGAPDATITASTSDLLLALWHRVPLSRLAVDGDAAHVERVL CCCCEEEEECCCCCCEECCCCCCCCEEECCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH DLVRI HHHCC >Mature Secondary Structure TPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVGQKV CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCC PYTDLDPEAPAGEDVLEWYTERADKLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH VHRWDIGHAYRGWDVDPLDAALATDGIGEWSEVFTPRRIGRDGGTPEELRGVRILLKADD HHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCHHHCCCCCCHHHHCCEEEEEEECC AAGSWLLRADADSIGIVDDDGAPDATITASTSDLLLALWHRVPLSRLAVDGDAAHVERVL CCCCEEEEECCCCCCEECCCCCCCCEEECCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH DLVRI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA