Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 169630444

GI number: 169630444

Start: 3413365

End: 3414156

Strand: Reverse

Name: etfB [H]

Synonym: MAB_3363c

Alternate gene names: 169630444

Gene position: 3414156-3413365 (Counterclockwise)

Preceding gene: 169630449

Following gene: 169630443

Centisome position: 67.38

GC content: 66.54

Gene sequence:

>792_bases
ATGACGAACATCGCGGTCCTGATCAAGCAGGTCCCAGACACGTGGTCGGAGCGCAAGCTCACCGACGGTGACTTCACGCT
CGACCGGGAAGCCGCCGACGCGGTGCTGGACGAGATCAACGAGCGTGCCGTTGAAGAAGCGCTGCTCATCAAGGAGCGCG
AGGGCGGCGACTCGGTCGTGACCGTGGTCTCCGCCGGACCGGAAAAGGCCACCGAGGCCATCCGCAAGGCGCTGTCCATG
GGGGCCGATAAGGCAGTTCACCTGCTCGACCCGGGTCTGCACGGATCCGACGCCATTCAGACCGGCTGGGCCCTGGCCCG
CGCGCTGGGTCAGGTCGAGGGTGTTGAGCTGGTTATCGCCGGTAACGAGGCAACTGACGGCCGCTCGGGCGCCATTCCGG
CGATCATCGCCGAGTACCTGGGCCTGCCGCAGCTGACCCACCTGCGCAAGCTGACCGTCGAAGGTGGCGTCGTCAAGGGC
GAGCGTGAGACCGACGAGGGCGTGTTCGAGGTCGAGGCCACCCTGCCGGCGATCGTCAGCGTCACCGAGAAGATCAACGA
GCCCCGCTTCCCGTCCTTCAAGGGCATCATGGCCGCCAAGAAGAAGGAAGTCGCCGTGCTGACCCTCGCCGAGATCGGCG
TGGAGGCCGACGAGGTGGGCGTCGCGAACGCCGGGTCCACCGTGCTGTCCTCGACCCCCAAGGCCGCCAAGACCGCGGGC
GAGAAGATCACCGACGAGGGCGAGGGCGGCACCAAGGTCGCCGAATTCCTGGTTGCCCAAAAGATCATCTAA

Upstream 100 bases:

>100_bases
GTGACAGTGCGACCGGCGGGCGTGGGTGCGCATGGAAGCACAGAGCAGATGGCCAGCACACCGCTGGCAGACAGCGAAGA
GGAAGGACGATCGGAGACTC

Downstream 100 bases:

>100_bases
ATCGACCCCCTTAATACCCAAACGAGAGAGTAACGAGAATCGATATGGCTGAAGTACTTGTGCTCGTTGAGCATTCAGAG
GGTGCGCTGAAGAAGGTCAG

Product: electron transfer flavoprotein subunit beta FixA

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTNIAVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALLIKEREGGDSVVTVVSAGPEKATEAIRKALSM
GADKAVHLLDPGLHGSDAIQTGWALARALGQVEGVELVIAGNEATDGRSGAIPAIIAEYLGLPQLTHLRKLTVEGGVVKG
ERETDEGVFEVEATLPAIVSVTEKINEPRFPSFKGIMAAKKKEVAVLTLAEIGVEADEVGVANAGSTVLSSTPKAAKTAG
EKITDEGEGGTKVAEFLVAQKII

Sequences:

>Translated_263_residues
MTNIAVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALLIKEREGGDSVVTVVSAGPEKATEAIRKALSM
GADKAVHLLDPGLHGSDAIQTGWALARALGQVEGVELVIAGNEATDGRSGAIPAIIAEYLGLPQLTHLRKLTVEGGVVKG
ERETDEGVFEVEATLPAIVSVTEKINEPRFPSFKGIMAAKKKEVAVLTLAEIGVEADEVGVANAGSTVLSSTPKAAKTAG
EKITDEGEGGTKVAEFLVAQKII
>Mature_262_residues
TNIAVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALLIKEREGGDSVVTVVSAGPEKATEAIRKALSMG
ADKAVHLLDPGLHGSDAIQTGWALARALGQVEGVELVIAGNEATDGRSGAIPAIIAEYLGLPQLTHLRKLTVEGGVVKGE
RETDEGVFEVEATLPAIVSVTEKINEPRFPSFKGIMAAKKKEVAVLTLAEIGVEADEVGVANAGSTVLSSTPKAAKTAGE
KITDEGEGGTKVAEFLVAQKII

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=210, Percent_Identity=34.2857142857143, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI62420877, Length=210, Percent_Identity=34.2857142857143, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI87081682, Length=256, Percent_Identity=28.125, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI2367123, Length=182, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87082158, Length=165, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=183, Percent_Identity=32.2404371584699, Blast_Score=81, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6321646, Length=191, Percent_Identity=32.4607329842932, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651147, Length=182, Percent_Identity=33.5164835164835, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24651145, Length=182, Percent_Identity=33.5164835164835, Blast_Score=81, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27587; Mature: 27455

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIAVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALLIKEREGGDSVV
CCCHHHHHHHCCCCHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TVVSAGPEKATEAIRKALSMGADKAVHLLDPGLHGSDAIQTGWALARALGQVEGVELVIA
EEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
GNEATDGRSGAIPAIIAEYLGLPQLTHLRKLTVEGGVVKGERETDEGVFEVEATLPAIVS
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEHHHHHHHHH
VTEKINEPRFPSFKGIMAAKKKEVAVLTLAEIGVEADEVGVANAGSTVLSSTPKAAKTAG
HHHHHCCCCCCCHHHHHHHCCCCEEEEEHHHHCCCHHHCCCCCCCCHHHHCCCHHHHHHC
EKITDEGEGGTKVAEFLVAQKII
CCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNIAVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALLIKEREGGDSVV
CCHHHHHHHCCCCHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TVVSAGPEKATEAIRKALSMGADKAVHLLDPGLHGSDAIQTGWALARALGQVEGVELVIA
EEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
GNEATDGRSGAIPAIIAEYLGLPQLTHLRKLTVEGGVVKGERETDEGVFEVEATLPAIVS
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEHHHHHHHHH
VTEKINEPRFPSFKGIMAAKKKEVAVLTLAEIGVEADEVGVANAGSTVLSSTPKAAKTAG
HHHHHCCCCCCCHHHHHHHCCCCEEEEEHHHHCCCHHHCCCCCCCCHHHHCCCHHHHHHC
EKITDEGEGGTKVAEFLVAQKII
CCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]