Click here to switch to the map view.

The map label for this gene is ykgB [H]

Identifier: 169630390

GI number: 169630390

Start: 3348464

End: 3348982

Strand: Reverse

Name: ykgB [H]

Synonym: MAB_3309c

Alternate gene names: 169630390

Gene position: 3348982-3348464 (Counterclockwise)

Preceding gene: 169630391

Following gene: 169630388

Centisome position: 66.09

GC content: 57.42

Gene sequence:

>519_bases
ATGTCCACCAGAACCGACGCGCTGAGCGTCGTATGCCAAAACAATGCCCCCGTCGTTCGCGCTCTGGCGCATATCGTGGC
TCGCTACGGGCTGGCCATCGTCATCGGTTGGATCGGAATATTCAAATTCTGCTCCTACGAGGCCCTCAACATTCAGCCCT
TGGTGGCCAACAGTCCCTTCATGGGTTGGCTTTACGGCGTGTTCAGTGTCCAGACCTTTTCATCGATCCTCGGTGTCGTA
GAGATAGTCACTGCCGTATTACTGGTGGTGAAGCCCTGGTATCCACGGGTGTCGCTAGCCGGAAGTGCTTTGGCGATAGT
GCTTTTCGTCAGCACGTTGTCGTTTCTGATCACGACACCAGGCGTCGGTGAAGCGTCGGCCGGCGGCTTTCCTTTCCTGT
CCATGACCGGGCAGTTTCTCATCAAGGACATCGTGCTGCTGGGAGTTTCGATCCTCACCCTCGCCGACGCCATGGAGGCA
ATCACTCACCATGCGGCATCGACGCAGGCGCGAACCTAG

Upstream 100 bases:

>100_bases
CCCGATTTCACGGTTGGACCACGACAGGCTCTTCACCTTCGCCTGAACCGCATCACGCAACCCAATTCATCTGAACGTTC
TCATACGAAAGGTATCGAAA

Downstream 100 bases:

>100_bases
CCATTCAGGCCATTCCCGGGACGGGTGATGAATAACAGGATGCAGTATGCGTCAGGTGGGGCCATTACAGATCCTCGTCG
CGTATACCGTGACTGTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSTRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALNIQPLVANSPFMGWLYGVFSVQTFSSILGVV
EIVTAVLLVVKPWYPRVSLAGSALAIVLFVSTLSFLITTPGVGEASAGGFPFLSMTGQFLIKDIVLLGVSILTLADAMEA
ITHHAASTQART

Sequences:

>Translated_172_residues
MSTRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALNIQPLVANSPFMGWLYGVFSVQTFSSILGVV
EIVTAVLLVVKPWYPRVSLAGSALAIVLFVSTLSFLITTPGVGEASAGGFPFLSMTGQFLIKDIVLLGVSILTLADAMEA
ITHHAASTQART
>Mature_171_residues
STRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALNIQPLVANSPFMGWLYGVFSVQTFSSILGVVE
IVTAVLLVVKPWYPRVSLAGSALAIVLFVSTLSFLITTPGVGEASAGGFPFLSMTGQFLIKDIVLLGVSILTLADAMEAI
THHAASTQART

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081715, Length=174, Percent_Identity=33.9080459770115, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 18260; Mature: 18129

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALNIQPLVANSPF
CCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCH
MGWLYGVFSVQTFSSILGVVEIVTAVLLVVKPWYPRVSLAGSALAIVLFVSTLSFLITTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GVGEASAGGFPFLSMTGQFLIKDIVLLGVSILTLADAMEAITHHAASTQART
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALNIQPLVANSPF
CCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCH
MGWLYGVFSVQTFSSILGVVEIVTAVLLVVKPWYPRVSLAGSALAIVLFVSTLSFLITTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GVGEASAGGFPFLSMTGQFLIKDIVLLGVSILTLADAMEAITHHAASTQART
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]