Click here to switch to the map view.

The map label for this gene is yqjH [C]

Identifier: 169630286

GI number: 169630286

Start: 3247776

End: 3248606

Strand: Reverse

Name: yqjH [C]

Synonym: MAB_3205c

Alternate gene names: 169630286

Gene position: 3248606-3247776 (Counterclockwise)

Preceding gene: 169630287

Following gene: 169630285

Centisome position: 64.11

GC content: 66.91

Gene sequence:

>831_bases
ATGACACGCCCGCTCCACGAGTTGCAGGTAGTTCGGACCGAGCAGGTGAGCCCGCACATCACCCGGGTGGTGCTCGGCGG
GAACGGATTCGAGGGATTCGAAGTCAGCTCGTTCACCGACAGCTACGCCAAGCTGATATTTCTTCCGCAGAGCCACGAAG
GGCCGGGCCCGCGCGATATCGACGAGGCGCGCGATATGCAGGCCACCGTGCGCACCTACACCATCCGGTCCGTGGATACC
GACCGTCGCGAGGTCGCCATCGACTTCGTGGTGCACGGTGACACCGGCGTGGCAGGGCCCTGGGCGTCGCGGGCCAAACC
CGGCGACAAGCTGTACATCACCGACTCGCATGGTGCGTACGCACCCGACCCCGCCGCCGATTGGCATCTGCTCGCCGGTG
ATGAGTCGGCGATTCCAGCGATCAGCGTCGCGCTGCAGGCGCTTCCGGAAAAGGCTCGCGCCAAGGTGTTCGTGGAGGTG
GCCGGTCCCCAGGACGAGATCGACTTCGATACCCGGGGCGACGTGGACGTGGTCTGGGTGCATCGCGGCGCCGGAGCCGA
CGAGGTCGGTGAGGAGCATGCGGGCGACAACGCCCCACTGGTGGCCGCGGTGCGTTCAGCGGAGTGGCCGCCCGGACAGG
TGCAGGTGTTCATCCACGGTGAGGCACAGACCGTCATGCACAACCTGCGGCCGTACATTCGCAAGGAACGCGGGGTCGCG
CCCAAATGGGCGGCGTCGATCTCGGGATACTGGCGGCGTGGCCGCACCGAGGAGACATTCCGCGTGTGGAAGCAGGAGCT
GGCGGCCGCCGAAGCTACCGTGAAGGAGTGA

Upstream 100 bases:

>100_bases
GATCATCAGGGGACTGTTGCCGTGACGTGGGTGCCCATCGGCACGCTTTCCTCCGTATAGTCAAGGCAATTGACATAGAG
GATTCGACGCAGGAGGCGAT

Downstream 100 bases:

>100_bases
CACCGCAACTGGCCGCCATTCTCGACGAATTCGCCGAGCACCTTGCGCTGGAACGCGGCCGGTCGGTGCACACCCAGCGT
GCCTATCGCGGCGACCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTRPLHELQVVRTEQVSPHITRVVLGGNGFEGFEVSSFTDSYAKLIFLPQSHEGPGPRDIDEARDMQATVRTYTIRSVDT
DRREVAIDFVVHGDTGVAGPWASRAKPGDKLYITDSHGAYAPDPAADWHLLAGDESAIPAISVALQALPEKARAKVFVEV
AGPQDEIDFDTRGDVDVVWVHRGAGADEVGEEHAGDNAPLVAAVRSAEWPPGQVQVFIHGEAQTVMHNLRPYIRKERGVA
PKWAASISGYWRRGRTEETFRVWKQELAAAEATVKE

Sequences:

>Translated_276_residues
MTRPLHELQVVRTEQVSPHITRVVLGGNGFEGFEVSSFTDSYAKLIFLPQSHEGPGPRDIDEARDMQATVRTYTIRSVDT
DRREVAIDFVVHGDTGVAGPWASRAKPGDKLYITDSHGAYAPDPAADWHLLAGDESAIPAISVALQALPEKARAKVFVEV
AGPQDEIDFDTRGDVDVVWVHRGAGADEVGEEHAGDNAPLVAAVRSAEWPPGQVQVFIHGEAQTVMHNLRPYIRKERGVA
PKWAASISGYWRRGRTEETFRVWKQELAAAEATVKE
>Mature_275_residues
TRPLHELQVVRTEQVSPHITRVVLGGNGFEGFEVSSFTDSYAKLIFLPQSHEGPGPRDIDEARDMQATVRTYTIRSVDTD
RREVAIDFVVHGDTGVAGPWASRAKPGDKLYITDSHGAYAPDPAADWHLLAGDESAIPAISVALQALPEKARAKVFVEVA
GPQDEIDFDTRGDVDVVWVHRGAGADEVGEEHAGDNAPLVAAVRSAEWPPGQVQVFIHGEAQTVMHNLRPYIRKERGVAP
KWAASISGYWRRGRTEETFRVWKQELAAAEATVKE

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=153, Percent_Identity=36.6013071895425, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 30322; Mature: 30191

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPLHELQVVRTEQVSPHITRVVLGGNGFEGFEVSSFTDSYAKLIFLPQSHEGPGPRDI
CCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCH
DEARDMQATVRTYTIRSVDTDRREVAIDFVVHGDTGVAGPWASRAKPGDKLYITDSHGAY
HHHHHHHEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC
APDPAADWHLLAGDESAIPAISVALQALPEKARAKVFVEVAGPQDEIDFDTRGDVDVVWV
CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEE
HRGAGADEVGEEHAGDNAPLVAAVRSAEWPPGQVQVFIHGEAQTVMHNLRPYIRKERGVA
ECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCC
PKWAASISGYWRRGRTEETFRVWKQELAAAEATVKE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRPLHELQVVRTEQVSPHITRVVLGGNGFEGFEVSSFTDSYAKLIFLPQSHEGPGPRDI
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCH
DEARDMQATVRTYTIRSVDTDRREVAIDFVVHGDTGVAGPWASRAKPGDKLYITDSHGAY
HHHHHHHEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC
APDPAADWHLLAGDESAIPAISVALQALPEKARAKVFVEVAGPQDEIDFDTRGDVDVVWV
CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEE
HRGAGADEVGEEHAGDNAPLVAAVRSAEWPPGQVQVFIHGEAQTVMHNLRPYIRKERGVA
ECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCC
PKWAASISGYWRRGRTEETFRVWKQELAAAEATVKE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]