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The map label for this gene is yebC [C]

Identifier: 169629972

GI number: 169629972

Start: 2941168

End: 2941923

Strand: Reverse

Name: yebC [C]

Synonym: MAB_2888c

Alternate gene names: 169629972

Gene position: 2941923-2941168 (Counterclockwise)

Preceding gene: 169629974

Following gene: 169629970

Centisome position: 58.06

GC content: 64.81

Gene sequence:

>756_bases
ATGAGCGGCCATTCCAAGTGGGCCACCACCAAGCATCAGAAGGCCGTCAAAGACGCGCGCCGGGGCAAAGAGTTCGCCAA
GCTGATCAAGAACATCGAGGTCGCCGCACGTACGGGCGGCGGAGATCCGGCTGGCAACCCGACGCTCTACGACGCCATTC
AGAAGGCCAAGAAGACCTCGGTGCCCAACGACAACATCGAGCGGGCCCGCAAGCGCGGAGCCGGCGAAGAAGCCGGTGGC
GCCGACTGGCAGACCATCATGTACGAGGGCTACGGCCCCAACGGCGTCGCGGTCCTCATCGAGTGCCTGAGTGACAACCG
CAACCGCGCCGCCGGTGAGGTGCGGGTGGCGATGACGCGCAACGGTGGCAGCATGGCCGATCCGGGTTCGGTGTCGTACC
TGTTCTCCCGCAAGGGCGTTGTGACGCTCGAGAAGAACAGCCTGTCGGAGGACGACGTGCTGACGGCCGTCCTGGAGGCG
GGCGCCGAGGAGGTCAACGACCTGGGCGAGACCTTCGAGGTCATCTCCGAGCCCACCGACTTGGTCGCCGTCCGTCAGGC
CCTACAGGAAGCCGGAATCGACTACGAATCGGCGGAAGCCAGCTTCCAGCCGTCGATGAGCGTGCCCGTCGACGTCGAAA
CCGCCCGCAAGGTGTTCAAACTGGTCGACGCCTTGGAGGACAGCGACGACGTGCAGAACGTTTACACCAATGTGGACTTG
TCCGACGAGGTGCTCGCCGCGCTCGACGAAGACTGA

Upstream 100 bases:

>100_bases
GTCCTTCACCAGGACAGTCATGTGATTCAGCCTAGGTGCGCGAGTACACTCGGGCAGCGCAGAAGTGCGACAGAACCTAG
AGAAAGTAGTACAGGGGTAC

Downstream 100 bases:

>100_bases
CCCGCGGCCCATATCGCCAACACCACCACCGCCGTAGTGACCAGCACGGCACCGACGGTGTCGGTGAGATAGTGGTACCC
GCAGGCGACCTGCCCCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHSKWATTKHQKAVKDARRGKEFAKLIKNIEVAARTGGGDPAGNPTLYDAIQKAKKTSVPNDNIERARKRGAGEEAGG
ADWQTIMYEGYGPNGVAVLIECLSDNRNRAAGEVRVAMTRNGGSMADPGSVSYLFSRKGVVTLEKNSLSEDDVLTAVLEA
GAEEVNDLGETFEVISEPTDLVAVRQALQEAGIDYESAEASFQPSMSVPVDVETARKVFKLVDALEDSDDVQNVYTNVDL
SDEVLAALDED

Sequences:

>Translated_251_residues
MSGHSKWATTKHQKAVKDARRGKEFAKLIKNIEVAARTGGGDPAGNPTLYDAIQKAKKTSVPNDNIERARKRGAGEEAGG
ADWQTIMYEGYGPNGVAVLIECLSDNRNRAAGEVRVAMTRNGGSMADPGSVSYLFSRKGVVTLEKNSLSEDDVLTAVLEA
GAEEVNDLGETFEVISEPTDLVAVRQALQEAGIDYESAEASFQPSMSVPVDVETARKVFKLVDALEDSDDVQNVYTNVDL
SDEVLAALDED
>Mature_250_residues
SGHSKWATTKHQKAVKDARRGKEFAKLIKNIEVAARTGGGDPAGNPTLYDAIQKAKKTSVPNDNIERARKRGAGEEAGGA
DWQTIMYEGYGPNGVAVLIECLSDNRNRAAGEVRVAMTRNGGSMADPGSVSYLFSRKGVVTLEKNSLSEDDVLTAVLEAG
AEEVNDLGETFEVISEPTDLVAVRQALQEAGIDYESAEASFQPSMSVPVDVETARKVFKLVDALEDSDDVQNVYTNVDLS
DEVLAALDED

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=29.8387096774194, Blast_Score=123, Evalue=2e-28,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=49.3975903614458, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1788294, Length=239, Percent_Identity=35.9832635983264, Blast_Score=124, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17556100, Length=247, Percent_Identity=25.5060728744939, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=36.8821292775665, Blast_Score=138, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=27.4193548387097, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2888_MYCA9 (B1MCJ6)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001703621.1
- ProteinModelPortal:   B1MCJ6
- SMR:   B1MCJ6
- EnsemblBacteria:   EBMYCT00000005582
- GeneID:   5965396
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_2888c
- GeneTree:   EBGT00050000017717
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   MABS561007:MAB_2888C-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26954; Mature: 26823

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATTKHQKAVKDARRGKEFAKLIKNIEVAARTGGGDPAGNPTLYDAIQKAKKTS
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCC
VPNDNIERARKRGAGEEAGGADWQTIMYEGYGPNGVAVLIECLSDNRNRAAGEVRVAMTR
CCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEE
NGGSMADPGSVSYLFSRKGVVTLEKNSLSEDDVLTAVLEAGAEEVNDLGETFEVISEPTD
CCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH
LVAVRQALQEAGIDYESAEASFQPSMSVPVDVETARKVFKLVDALEDSDDVQNVYTNVDL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
SDEVLAALDED
CHHHHHHHCCC
>Mature Secondary Structure 
SGHSKWATTKHQKAVKDARRGKEFAKLIKNIEVAARTGGGDPAGNPTLYDAIQKAKKTS
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCC
VPNDNIERARKRGAGEEAGGADWQTIMYEGYGPNGVAVLIECLSDNRNRAAGEVRVAMTR
CCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEE
NGGSMADPGSVSYLFSRKGVVTLEKNSLSEDDVLTAVLEAGAEEVNDLGETFEVISEPTD
CCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH
LVAVRQALQEAGIDYESAEASFQPSMSVPVDVETARKVFKLVDALEDSDDVQNVYTNVDL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
SDEVLAALDED
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA