Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629970

Identifier: 169629970

GI number: 169629970

Start: 2940005

End: 2940424

Strand: Reverse

Name: 169629970

Synonym: MAB_2886c

Alternate gene names: NA

Gene position: 2940424-2940005 (Counterclockwise)

Preceding gene: 169629972

Following gene: 169629968

Centisome position: 58.03

GC content: 61.9

Gene sequence:

>420_bases
ATGGCCACACAAACAGTCGCCCCGGCGCCTGAATCGACAACTCGCTGGCACACCGCACGTGCCGTTCTCGCACTACCGTT
CACCGTGGCCGTCTTGGTGCCACTGGTAATCCTGTACGGAACGGGCATCGGGGTGCCCTCGTGGATGTCCGATCAGATGT
CGATCACCGCGACAGTGATCGGAACCCTGCTGATCGCGGCCGGCTCATTCCTGGTGACCCGCACCGTCGCACAATTCGAT
CAACCGGGAAGCAGGCATGTGCGCAGCCCGTTGATCACCGGTGTCGTTGCCATCCTGCTGGGTGAGGCGTTCGCGGTGAA
CTCGGTGGGTCTGCTGATCTGGACCGCGGTCTTCGTGACGATGAGCGCCATCTATTTCTCGCTGGTCGACGAGCATGGGG
CGTTGAAGGTTCGGTCCTGA

Upstream 100 bases:

>100_bases
GCGTTACTGTGATGTCAACGACTGTTGGTCAACAAGTGTTGACAGTGTATGTCAGGCAGGCGTACATCTAAGACATCCGA
AAAGTGAGGGGAGGCCCGTC

Downstream 100 bases:

>100_bases
CGGCCCGCTAGGGCGCAGGGGTGTCGATGTACTGCTGAACGATCGGCGCCATCCAGTTCACGATGTCCTGATGCGTCATT
TCGATGACGGGGCTGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVIGTLLIAAGSFLVTRTVAQFD
QPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVTMSAIYFSLVDEHGALKVRS

Sequences:

>Translated_139_residues
MATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVIGTLLIAAGSFLVTRTVAQFD
QPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVTMSAIYFSLVDEHGALKVRS
>Mature_138_residues
ATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVIGTLLIAAGSFLVTRTVAQFDQ
PGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVTMSAIYFSLVDEHGALKVRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14679; Mature: 14548

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
GTLLIAAGSFLVTRTVAQFDQPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSAIYFSLVDEHGALKVRS
HHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
ATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
GTLLIAAGSFLVTRTVAQFDQPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSAIYFSLVDEHGALKVRS
HHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA