| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yceG [C]
Identifier: 169629933
GI number: 169629933
Start: 2897368
End: 2898654
Strand: Reverse
Name: yceG [C]
Synonym: MAB_2849c
Alternate gene names: 169629933
Gene position: 2898654-2897368 (Counterclockwise)
Preceding gene: 169629934
Following gene: 169629932
Centisome position: 57.2
GC content: 66.51
Gene sequence:
>1287_bases TTGAGCGACTGGCGCGACTGGGACGATCGCCAGGAGCACGATGACGACTGGGGAGGCGGCCGCCGGGCCGTGCCGGTCGC CGTTGGGCCCCGTCCGCGAGAGACCCGCCGGGAGCGGGCGCGGCGCAGGGCGGCGGCGCGGCGCCGGCGGAACGCGGGAA TCCTGGGACTTGCGGCGGTTGTCATCATCACGGTCGCGGCCGTCGTCGGTGGGGCCACGTTATGGGACAGCTTGTTCGGT GCCGACCGTCCCGTCACCGACTATTCAGGATCCGGCGTCAAGGACTTCGTGTTCGAGGTACACCGTGGGGACACCACCAA GGTGATCGGCCAGCGCCTCAAGGACGAGGGGGTGGTGGCGACCCCGAGTGCCTTCACCGACGCGGCGGCGGGCAATCAGG CCATCGCCGCGATCCAGCCCGGCTTCTACAAGCTGCGCACCAAGATCGCCGGCAAGGAGGCGGTCGCACGCCTCGCCGAG CAGGACAACCGAGTAGGTCTGCTGGTCATCCCCGAGGGGCGCCAGCTCGACGACGTCTCGGCGGTCTCCAATGGAGCGGT CACGGAGGGCATATTCACCCTGATCGCCCGTGCCTCTTGTGTGGATCTCGACGGGGACAAACATTGTGTGGCCGCCTCGG ATCTGCGCCAGGCCGCCACGACGGCCTCTCAAGGCGAGCTGGACGTGCCGGACTGGGCATCCAACGGAGTCAACGCCGTG CGCGACGACCACCGCCGCATCGAAGGACTGATCGCCGCCGGACGCTGGGACTTTGACCCGATGGCGGAGCCGGAGCAGAT CCTGGCGTCCTTGATCCGGGAAAGCAACGCCCAATATCAGCAACTCGGACTGTTGAGCTCCGATGCGGCCGGGCTGTCGC CCTATCAGGTGCTGGTGGTGGCGTCCTTGCTGCAGCGCGAGGCCAAGCCCCGGGATTTCGCGAAGGTGGCGCGGGTCGTC TACAACCGTCTTGCCAAACATCAGAAGCTCGAATTCGACTCCACCGTGAACTACCCGTTGGACCGGCAGGAAGTCGCGAC CACCGACGAAGATCGTGAGCGTAAGACGCTGTGGAACACCTATGTGTCACAGGGCCTTCCGGGCACACCGATCAGCTCGC CCTCCCCGGAGGCGCTGCAGGCGGCCGAACGTCCGGAGTCGGGGGATTGGCTGTACTTCGTCACCATTGACGCCGAGGGG ACCACGCTGTTCACCGCCGACTACAACGAGCACTTGGCGAATATCGAGCTCGCCAAGAAGAACGGCATCCTGGACAGTGC TCGCTGA
Upstream 100 bases:
>100_bases CTCGTCAGCAGCGCGGCATCATCGACCAGGCGGCGGCGGTGGCCATTCTGCAGGATTGGCTTGAGCAGCGGCGCCGGTGC GGCAGTGAAGGGGACACGCC
Downstream 100 bases:
>100_bases GATTCGCCGCGCCGCGGTCCTGGGTTCACCGATCGGGCATTCGCGCTCACCGGATTTGCACGTGGCGGCCTACCGCGCGC TGGGCCTGACCGGGTGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSDWRDWDDRQEHDDDWGGGRRAVPVAVGPRPRETRRERARRRAAARRRRNAGILGLAAVVIITVAAVVGGATLWDSLFG ADRPVTDYSGSGVKDFVFEVHRGDTTKVIGQRLKDEGVVATPSAFTDAAAGNQAIAAIQPGFYKLRTKIAGKEAVARLAE QDNRVGLLVIPEGRQLDDVSAVSNGAVTEGIFTLIARASCVDLDGDKHCVAASDLRQAATTASQGELDVPDWASNGVNAV RDDHRRIEGLIAAGRWDFDPMAEPEQILASLIRESNAQYQQLGLLSSDAAGLSPYQVLVVASLLQREAKPRDFAKVARVV YNRLAKHQKLEFDSTVNYPLDRQEVATTDEDRERKTLWNTYVSQGLPGTPISSPSPEALQAAERPESGDWLYFVTIDAEG TTLFTADYNEHLANIELAKKNGILDSAR
Sequences:
>Translated_428_residues MSDWRDWDDRQEHDDDWGGGRRAVPVAVGPRPRETRRERARRRAAARRRRNAGILGLAAVVIITVAAVVGGATLWDSLFG ADRPVTDYSGSGVKDFVFEVHRGDTTKVIGQRLKDEGVVATPSAFTDAAAGNQAIAAIQPGFYKLRTKIAGKEAVARLAE QDNRVGLLVIPEGRQLDDVSAVSNGAVTEGIFTLIARASCVDLDGDKHCVAASDLRQAATTASQGELDVPDWASNGVNAV RDDHRRIEGLIAAGRWDFDPMAEPEQILASLIRESNAQYQQLGLLSSDAAGLSPYQVLVVASLLQREAKPRDFAKVARVV YNRLAKHQKLEFDSTVNYPLDRQEVATTDEDRERKTLWNTYVSQGLPGTPISSPSPEALQAAERPESGDWLYFVTIDAEG TTLFTADYNEHLANIELAKKNGILDSAR >Mature_427_residues SDWRDWDDRQEHDDDWGGGRRAVPVAVGPRPRETRRERARRRAAARRRRNAGILGLAAVVIITVAAVVGGATLWDSLFGA DRPVTDYSGSGVKDFVFEVHRGDTTKVIGQRLKDEGVVATPSAFTDAAAGNQAIAAIQPGFYKLRTKIAGKEAVARLAEQ DNRVGLLVIPEGRQLDDVSAVSNGAVTEGIFTLIARASCVDLDGDKHCVAASDLRQAATTASQGELDVPDWASNGVNAVR DDHRRIEGLIAAGRWDFDPMAEPEQILASLIRESNAQYQQLGLLSSDAAGLSPYQVLVVASLLQREAKPRDFAKVARVVY NRLAKHQKLEFDSTVNYPLDRQEVATTDEDRERKTLWNTYVSQGLPGTPISSPSPEALQAAERPESGDWLYFVTIDAEGT TLFTADYNEHLANIELAKKNGILDSAR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=332, Percent_Identity=23.4939759036145, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 46713; Mature: 46581
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDWRDWDDRQEHDDDWGGGRRAVPVAVGPRPRETRRERARRRAAARRRRNAGILGLAAV CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VIITVAAVVGGATLWDSLFGADRPVTDYSGSGVKDFVFEVHRGDTTKVIGQRLKDEGVVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEE TPSAFTDAAAGNQAIAAIQPGFYKLRTKIAGKEAVARLAEQDNRVGLLVIPEGRQLDDVS CCCHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCHHH AVSNGAVTEGIFTLIARASCVDLDGDKHCVAASDLRQAATTASQGELDVPDWASNGVNAV HHCCCCHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHH RDDHRRIEGLIAAGRWDFDPMAEPEQILASLIRESNAQYQQLGLLSSDAAGLSPYQVLVV HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHH ASLLQREAKPRDFAKVARVVYNRLAKHQKLEFDSTVNYPLDRQEVATTDEDRERKTLWNT HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH YVSQGLPGTPISSPSPEALQAAERPESGDWLYFVTIDAEGTTLFTADYNEHLANIELAKK HHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECHHHHHHCEEEHHH NGILDSAR CCCCCCCC >Mature Secondary Structure SDWRDWDDRQEHDDDWGGGRRAVPVAVGPRPRETRRERARRRAAARRRRNAGILGLAAV CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VIITVAAVVGGATLWDSLFGADRPVTDYSGSGVKDFVFEVHRGDTTKVIGQRLKDEGVVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEE TPSAFTDAAAGNQAIAAIQPGFYKLRTKIAGKEAVARLAEQDNRVGLLVIPEGRQLDDVS CCCHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCHHH AVSNGAVTEGIFTLIARASCVDLDGDKHCVAASDLRQAATTASQGELDVPDWASNGVNAV HHCCCCHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHH RDDHRRIEGLIAAGRWDFDPMAEPEQILASLIRESNAQYQQLGLLSSDAAGLSPYQVLVV HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHH ASLLQREAKPRDFAKVARVVYNRLAKHQKLEFDSTVNYPLDRQEVATTDEDRERKTLWNT HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH YVSQGLPGTPISSPSPEALQAAERPESGDWLYFVTIDAEGTTLFTADYNEHLANIELAKK HHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECHHHHHHCEEEHHH NGILDSAR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]