| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629889
Identifier: 169629889
GI number: 169629889
Start: 2853326
End: 2854057
Strand: Reverse
Name: 169629889
Synonym: MAB_2805c
Alternate gene names: NA
Gene position: 2854057-2853326 (Counterclockwise)
Preceding gene: 169629892
Following gene: 169629888
Centisome position: 56.32
GC content: 65.85
Gene sequence:
>732_bases GTGTCCGCAGTCGCCGCGGTTGCCGGCGTTCTTGTTGCTTCACCTGCGCTTTCGATCGCCGATCCAGCTGCCGAAACCGC TCCCAAGATTGTCGCTTTCCCGGGCATGTCGATAGTCCAGGGAGACAGCCGTTGCACTCTTGGCTATGTCGACCCGGTCT CCCGTATCGGTCTGACGGCGGGTCACTGCAACGCCACCGGATCGATTGTCGATCTGGCCGGCAATCGCCTCGGTGAGGTG CTGCTGATGAGCCGCAACCTGCCCACCGGCGGCGCGATCGGACCCGGCGACGTCGTCTCGGACTACGAGGGCATCTCATT CGGCCCGGGGGTGGAGCTGAGCAGCAACCTGCCCAACGGGCTTGCACTACGGATGGCGCAGAATGCCGGTCCCGAGCTGG GTCTGCCGGTGTGCCTGATGGGATCGGTGTCCGGCGAAACCTGCGGCAAGGTGGAGGCCATCAACAACGGTTGGTTCACC ATGGTGGATGTCGCTGGGCAACACGGTGATTCGGGAGGCCCGGTGTATACGGTCACCCAACCCGGACAGGCGCTGCTGGT GGGTATCTATTCCTTGCGCTGGGGCGGCAAGCCCGCGGCGATGTCCTGGTCGGCGATCTCGGCCCAGATGCAGTCACAGT TGGTGGCGCAAATGCCTGCGGCGGGCCCGGGTAACGGCGGGCCCGAACTTCCGGCGCCGCCAACGCCCGCGGCGGTTTCC GCGGCTTCGTAG
Upstream 100 bases:
>100_bases TGACACCCCAGCAATCCGTCGCCATGCTCGTTTGCAGGGCGGGATTGTCAACCGAGGGCTGGTTGTTGTGAAAAACGTGA GCAGAGCACTGGCATGTGGT
Downstream 100 bases:
>100_bases GCTTCGTGGGCTTCGTGGGCACATTTCCCCGGGGTACATAGCGCTTTTATGTCTGGTATCGTGGCGCCGTTCTGAGGCCA AATAGCAATTTGCTGATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSAVAAVAGVLVASPALSIADPAAETAPKIVAFPGMSIVQGDSRCTLGYVDPVSRIGLTAGHCNATGSIVDLAGNRLGEV LLMSRNLPTGGAIGPGDVVSDYEGISFGPGVELSSNLPNGLALRMAQNAGPELGLPVCLMGSVSGETCGKVEAINNGWFT MVDVAGQHGDSGGPVYTVTQPGQALLVGIYSLRWGGKPAAMSWSAISAQMQSQLVAQMPAAGPGNGGPELPAPPTPAAVS AAS
Sequences:
>Translated_243_residues MSAVAAVAGVLVASPALSIADPAAETAPKIVAFPGMSIVQGDSRCTLGYVDPVSRIGLTAGHCNATGSIVDLAGNRLGEV LLMSRNLPTGGAIGPGDVVSDYEGISFGPGVELSSNLPNGLALRMAQNAGPELGLPVCLMGSVSGETCGKVEAINNGWFT MVDVAGQHGDSGGPVYTVTQPGQALLVGIYSLRWGGKPAAMSWSAISAQMQSQLVAQMPAAGPGNGGPELPAPPTPAAVS AAS >Mature_242_residues SAVAAVAGVLVASPALSIADPAAETAPKIVAFPGMSIVQGDSRCTLGYVDPVSRIGLTAGHCNATGSIVDLAGNRLGEVL LMSRNLPTGGAIGPGDVVSDYEGISFGPGVELSSNLPNGLALRMAQNAGPELGLPVCLMGSVSGETCGKVEAINNGWFTM VDVAGQHGDSGGPVYTVTQPGQALLVGIYSLRWGGKPAAMSWSAISAQMQSQLVAQMPAAGPGNGGPELPAPPTPAAVSA AS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009003 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24091; Mature: 23960
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00064 L_LDH ; PS00134 TRYPSIN_HIS ; PS00135 TRYPSIN_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVAAVAGVLVASPALSIADPAAETAPKIVAFPGMSIVQGDSRCTLGYVDPVSRIGLTA CCHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEECCCCEEECCCCEEEEECCCHHHHCCCC GHCNATGSIVDLAGNRLGEVLLMSRNLPTGGAIGPGDVVSDYEGISFGPGVELSSNLPNG CCCCCCCCEEECCCCHHCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC LALRMAQNAGPELGLPVCLMGSVSGETCGKVEAINNGWFTMVDVAGQHGDSGGPVYTVTQ EEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEC PGQALLVGIYSLRWGGKPAAMSWSAISAQMQSQLVAQMPAAGPGNGGPELPAPPTPAAVS CCCEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AAS CCC >Mature Secondary Structure SAVAAVAGVLVASPALSIADPAAETAPKIVAFPGMSIVQGDSRCTLGYVDPVSRIGLTA CHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEECCCCEEECCCCEEEEECCCHHHHCCCC GHCNATGSIVDLAGNRLGEVLLMSRNLPTGGAIGPGDVVSDYEGISFGPGVELSSNLPNG CCCCCCCCEEECCCCHHCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC LALRMAQNAGPELGLPVCLMGSVSGETCGKVEAINNGWFTMVDVAGQHGDSGGPVYTVTQ EEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEC PGQALLVGIYSLRWGGKPAAMSWSAISAQMQSQLVAQMPAAGPGNGGPELPAPPTPAAVS CCCEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AAS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]