Click here to switch to the map view.

The map label for this gene is metQ [H]

Identifier: 169629888

GI number: 169629888

Start: 2852305

End: 2853171

Strand: Reverse

Name: metQ [H]

Synonym: MAB_2804c

Alternate gene names: 169629888

Gene position: 2853171-2852305 (Counterclockwise)

Preceding gene: 169629889

Following gene: 169629887

Centisome position: 56.31

GC content: 58.36

Gene sequence:

>867_bases
ATGAAGCGTATCGTCATTGCTCTTGCCGTGCTCGCGATATCCGTGGGAGGTGTGGCGTGCTCCGGTGAAGATGGTGGCGG
TGGAAATATCGTGCGTATCGGCACCACCGAGGCCGGCAAGGACTCCTGGGATGTCTTCGTAGCGGAGGCGGAAAAGGCGG
GGATCAAACTCGTCACGACCAACTTCACGGACTACAGCCAGCCTAATGTGGCACTCACTCAAAAACAGATCGACGTGAAC
TTATTCCAGCATCTGCGTTTCCTGGGCGAATATAACGTGGCCGATAATGCAACGCTGGCCCCCGTGGGTGCTACGTATAT
TGTGCCGCTCGGCTTGTATTCCCAGAAGCACAAGACGCTCGCCGACATTCCGCGGGGCGGACAGATCGCGATTCCCAACG
ATCCGCCTAACCAGGCTCGGGCCTTATTTGTGTTGCGGGCGGCCGGTCTCATCGCGCTCAAGGGTGGACGGGTGACGCCG
AGTACGGCCGATATAGACAAAGATGCCTCGCGGGTCACCGTGGCACTTGTCGACGCGGCCCAAACCCCGCTGTCGTTGAA
ATCGATTGACGGTGCCGTCATCAACAACACCTATCTGGCCCAATCGAATATCGATCCGAAGAGCGCGCTCTACGCCGACG
ATCCGACGAGTCCAGGCGCCGAGCCCTACATCAACGTGATCGTGGCGCGCGCAGAAGAGAAGGACAATCCCACCTACCAA
AAACTCGTGGACGTCTTTCATTCGCCGGCCGTCACGGAGGCGTACGCCAAGGAAAGCAAGGGAACTCAGCTCTCCGTGAC
CAAAAACGGACAGGACTGCGCGGCGATCCTGAGCAGGATCGAACAGCAGATACGCAACGAGAAGTGA

Upstream 100 bases:

>100_bases
GGTATCGTGGCGCCGTTCTGAGGCCAAATAGCAATTTGCTGATCCTTCAGATATTACGCAATGTCAATCATTGCGATCAT
GCTGAATTTGAAAGGCTGAC

Downstream 100 bases:

>100_bases
TCCGGGAAATGGGCGATGTGGCACCACTGATCCAATTCCAGAACGTCACCAAGACCTTTCGGGTGGGAAAGAAGACGGTG
ACCGCAGTCGATGACGTGTC

Product: ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKRIVIALAVLAISVGGVACSGEDGGGGNIVRIGTTEAGKDSWDVFVAEAEKAGIKLVTTNFTDYSQPNVALTQKQIDVN
LFQHLRFLGEYNVADNATLAPVGATYIVPLGLYSQKHKTLADIPRGGQIAIPNDPPNQARALFVLRAAGLIALKGGRVTP
STADIDKDASRVTVALVDAAQTPLSLKSIDGAVINNTYLAQSNIDPKSALYADDPTSPGAEPYINVIVARAEEKDNPTYQ
KLVDVFHSPAVTEAYAKESKGTQLSVTKNGQDCAAILSRIEQQIRNEK

Sequences:

>Translated_288_residues
MKRIVIALAVLAISVGGVACSGEDGGGGNIVRIGTTEAGKDSWDVFVAEAEKAGIKLVTTNFTDYSQPNVALTQKQIDVN
LFQHLRFLGEYNVADNATLAPVGATYIVPLGLYSQKHKTLADIPRGGQIAIPNDPPNQARALFVLRAAGLIALKGGRVTP
STADIDKDASRVTVALVDAAQTPLSLKSIDGAVINNTYLAQSNIDPKSALYADDPTSPGAEPYINVIVARAEEKDNPTYQ
KLVDVFHSPAVTEAYAKESKGTQLSVTKNGQDCAAILSRIEQQIRNEK
>Mature_288_residues
MKRIVIALAVLAISVGGVACSGEDGGGGNIVRIGTTEAGKDSWDVFVAEAEKAGIKLVTTNFTDYSQPNVALTQKQIDVN
LFQHLRFLGEYNVADNATLAPVGATYIVPLGLYSQKHKTLADIPRGGQIAIPNDPPNQARALFVLRAAGLIALKGGRVTP
STADIDKDASRVTVALVDAAQTPLSLKSIDGAVINNTYLAQSNIDPKSALYADDPTSPGAEPYINVIVARAEEKDNPTYQ
KLVDVFHSPAVTEAYAKESKGTQLSVTKNGQDCAAILSRIEQQIRNEK

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=262, Percent_Identity=34.3511450381679, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1790093, Length=208, Percent_Identity=34.6153846153846, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 30557; Mature: 30557

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIVIALAVLAISVGGVACSGEDGGGGNIVRIGTTEAGKDSWDVFVAEAEKAGIKLVTT
CCHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEE
NFTDYSQPNVALTQKQIDVNLFQHLRFLGEYNVADNATLAPVGATYIVPLGLYSQKHKTL
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCHH
ADIPRGGQIAIPNDPPNQARALFVLRAAGLIALKGGRVTPSTADIDKDASRVTVALVDAA
HHCCCCCEEECCCCCCHHHHHEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEECC
QTPLSLKSIDGAVINNTYLAQSNIDPKSALYADDPTSPGAEPYINVIVARAEEKDNPTYQ
CCCCCHHHCCCEEECCEEEECCCCCHHHCEECCCCCCCCCCCEEEEEEEECCCCCCCHHH
KLVDVFHSPAVTEAYAKESKGTQLSVTKNGQDCAAILSRIEQQIRNEK
HHHHHHCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRIVIALAVLAISVGGVACSGEDGGGGNIVRIGTTEAGKDSWDVFVAEAEKAGIKLVTT
CCHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEE
NFTDYSQPNVALTQKQIDVNLFQHLRFLGEYNVADNATLAPVGATYIVPLGLYSQKHKTL
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCHH
ADIPRGGQIAIPNDPPNQARALFVLRAAGLIALKGGRVTPSTADIDKDASRVTVALVDAA
HHCCCCCEEECCCCCCHHHHHEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEECC
QTPLSLKSIDGAVINNTYLAQSNIDPKSALYADDPTSPGAEPYINVIVARAEEKDNPTYQ
CCCCCHHHCCCEEECCEEEECCCCCHHHCEECCCCCCCCCCCEEEEEEEECCCCCCCHHH
KLVDVFHSPAVTEAYAKESKGTQLSVTKNGQDCAAILSRIEQQIRNEK
HHHHHHCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]