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The map label for this gene is pad1 [H]

Identifier: 169629850

GI number: 169629850

Start: 2815308

End: 2815922

Strand: Direct

Name: pad1 [H]

Synonym: MAB_2766

Alternate gene names: 169629850

Gene position: 2815308-2815922 (Clockwise)

Preceding gene: 169629849

Following gene: 169629851

Centisome position: 55.56

GC content: 60.0

Gene sequence:

>615_bases
ATGCGCATAGTCATTGCCATGACCGGGGCGACCGGCGCGGTTCTCGGGGTTCGACTCCTCGAGAACCTAGCAGCGCGGCC
CGACATCGAAACCCACCTGGTGATCAGTCGTTGGGGCCGGGCCACTATCGACTATGAAACCGACCGCACACCAGTCGAAG
TCGAAAAACTGGCCGATGCGGTGTACAAACCCGATGACATGTACGCCCCGATCTCATCGGGGTCATTCACCACCGACGCA
ACAATCGTGGTGCCCTGCAGCATGAAGACCGTGGCCGCCATTCGCGCGGGCTACTCCGACGGTCTCATCGCACGCGCGGC
AGACGTAACCCTGAAGGAGCGCCGGCGGCTGGTGCTGGTGCCCCGAGAAACACCGCTGTCCGAGATTCATCTGGATAACA
TGCTCGCCCTGTCTCGCATGGGTGCACACATAGTTCCGCCCATGCCCGCGTTCTATCAAATGCCCAACACCATCGACGAC
CTGGTGAACCACACGGTGATGCGCATCCTGGACGCCGCCGGCATCGAGAACGAAACCGCGCCGCGTTGGCGGGGACTTCC
TGCTCGAAATGAGCGAAATACCAATAAGAATGGAAATCCATATGGCGTTCAATGA

Upstream 100 bases:

>100_bases
GTTACGGCATCGAGGACCGCGGCGATGGAGGCGGCGATGTGAGCTTTTTCTCCCCTGGGTTGGCGGTTCTCTCCAGAAAC
CAAGGGCTAGAGGCTATTTG

Downstream 100 bases:

>100_bases
CCTCCGCCGCTACCTCGCCGACCTGGAAGCACACGGCGAGCTGCGCACCATCAAGACTCCCGTGAGCACCGAGATCCAAC
TTGGGGCCATCGCCCGACTC

Product: decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRIVIAMTGATGAVLGVRLLENLAARPDIETHLVISRWGRATIDYETDRTPVEVEKLADAVYKPDDMYAPISSGSFTTDA
TIVVPCSMKTVAAIRAGYSDGLIARAADVTLKERRRLVLVPRETPLSEIHLDNMLALSRMGAHIVPPMPAFYQMPNTIDD
LVNHTVMRILDAAGIENETAPRWRGLPARNERNTNKNGNPYGVQ

Sequences:

>Translated_204_residues
MRIVIAMTGATGAVLGVRLLENLAARPDIETHLVISRWGRATIDYETDRTPVEVEKLADAVYKPDDMYAPISSGSFTTDA
TIVVPCSMKTVAAIRAGYSDGLIARAADVTLKERRRLVLVPRETPLSEIHLDNMLALSRMGAHIVPPMPAFYQMPNTIDD
LVNHTVMRILDAAGIENETAPRWRGLPARNERNTNKNGNPYGVQ
>Mature_204_residues
MRIVIAMTGATGAVLGVRLLENLAARPDIETHLVISRWGRATIDYETDRTPVEVEKLADAVYKPDDMYAPISSGSFTTDA
TIVVPCSMKTVAAIRAGYSDGLIARAADVTLKERRRLVLVPRETPLSEIHLDNMLALSRMGAHIVPPMPAFYQMPNTIDD
LVNHTVMRILDAAGIENETAPRWRGLPARNERNTNKNGNPYGVQ

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=48.9247311827957, Blast_Score=179, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6320746, Length=188, Percent_Identity=56.9148936170213, Blast_Score=218, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22449; Mature: 22449

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVIAMTGATGAVLGVRLLENLAARPDIETHLVISRWGRATIDYETDRTPVEVEKLADA
CEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHH
VYKPDDMYAPISSGSFTTDATIVVPCSMKTVAAIRAGYSDGLIARAADVTLKERRRLVLV
HCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEHHHHCCCHHHCCCEEEE
PRETPLSEIHLDNMLALSRMGAHIVPPMPAFYQMPNTIDDLVNHTVMRILDAAGIENETA
ECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PRWRGLPARNERNTNKNGNPYGVQ
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIVIAMTGATGAVLGVRLLENLAARPDIETHLVISRWGRATIDYETDRTPVEVEKLADA
CEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHH
VYKPDDMYAPISSGSFTTDATIVVPCSMKTVAAIRAGYSDGLIARAADVTLKERRRLVLV
HCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEHHHHCCCHHHCCCEEEE
PRETPLSEIHLDNMLALSRMGAHIVPPMPAFYQMPNTIDDLVNHTVMRILDAAGIENETA
ECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PRWRGLPARNERNTNKNGNPYGVQ
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]