Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629146

Identifier: 169629146

GI number: 169629146

Start: 2057548

End: 2058363

Strand: Direct

Name: 169629146

Synonym: MAB_2059

Alternate gene names: NA

Gene position: 2057548-2058363 (Clockwise)

Preceding gene: 169629145

Following gene: 169629147

Centisome position: 40.61

GC content: 71.81

Gene sequence:

>816_bases
ATGGCGGTGAGCATGCAGTCGGTTATCACCGACATCGAAGCGGAGACGGCAGCCCTACGCGGATTGGTCGCGCCGCTGAC
CGAAGGTCCGCGCGGCTGGGACGCGCCGACTCCGGCCGTGGGCTGGACGATCCGCGACCAGATCAGCCATCTGGCGTTCT
TCGACGACGTCGCGGTGCGCTCGGCCACCGACCCCGACGGGTTCAGCAGCGACTACCTGCCGATGATGGCCGACGGAGCC
ATCTCACCCGACGTCATCGCCGAGCGCTACCGTCAAATGCCGGCTGCCGACCTGCTCGCGTGGTTCGACACGTCGCGTGC
CGCCCTCGTTGCGGCGTTCGCGGACATTGCCCCGGCGACCCGCCTGCCGTGGTTCGGGCCGCCGATGAGCGCGGTCTCGT
CGCTGACAGCGCGACTCATGGAGACCTGGGCGCACGGCCAGGACGTCGTCGACGCGCTCGGCGCGACCCGCGAGGCCACG
GCACGGCTGCGTCACGTGGCCCACATCGGGGTGGGTGCACGCGCGTTCAGCTACCTGGCCAACGGTCTGGACCTGCCCGC
GGACCCGGTACGCGTTGAGCTGACCGCTCCGGACGGCAGCGTCTGGACGTGGGGGCCAGCCGACGCGGCCAACCGCGTGA
GCGGGCCGGCGCTCGACTTTTGCCTGTTGGTCACCCAACGCCGCCACCGCGACGACACCGCTTTGGTCGCCGACGGCCCG
CTGGCCGACCACCAGTGGCTCGCGATCGCCCAGGCCTTCGCGGGGCCCCCTGGCGGCGGGCGCGTGGCGGGCCAGTTTGC
AGGGCGTCAGCGGTGA

Upstream 100 bases:

>100_bases
GCCGACGAGATATGGGAGCCGGTCTATCTGAGCGACGACGCGCAGGAAGGCCCGGCGGCGTTCCGCGAGAAGCGCGCGCC
GCAGTGGAAGGGACACTGAC

Downstream 100 bases:

>100_bases
GCGTCCCGGTCCGCATCGGCAACTGCTCCGGCTTTTACGGCGACCGCATCGCCGCAGCCCGCGAGATGGTCGAGGGCGGA
CCGATCGACGTCCTGTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MAVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVRSATDPDGFSSDYLPMMADGA
ISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPATRLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREAT
ARLRHVAHIGVGARAFSYLANGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP
LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR

Sequences:

>Translated_271_residues
MAVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVRSATDPDGFSSDYLPMMADGA
ISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPATRLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREAT
ARLRHVAHIGVGARAFSYLANGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP
LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR
>Mature_270_residues
AVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVRSATDPDGFSSDYLPMMADGAI
SPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPATRLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREATA
RLRHVAHIGVGARAFSYLANGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGPL
ADHQWLAIAQAFAGPPGGGRVAGQFAGRQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017517
- InterPro:   IPR017518
- InterPro:   IPR013917 [H]

Pfam domain/function: PF08608 Wyosine_form [H]

EC number: NA

Molecular weight: Translated: 28762; Mature: 28630

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
SATDPDGFSSDYLPMMADGAISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPAT
CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCC
RLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREATARLRHVAHIGVGARAFSYLA
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH
NGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP
CCCCCCCCCEEEEEECCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCC
LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR
CCCHHHHHHHHHHCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
AVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVR
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
SATDPDGFSSDYLPMMADGAISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPAT
CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCC
RLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREATARLRHVAHIGVGARAFSYLA
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH
NGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP
CCCCCCCCCEEEEEECCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCC
LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR
CCCHHHHHHHHHHCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]