| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629146
Identifier: 169629146
GI number: 169629146
Start: 2057548
End: 2058363
Strand: Direct
Name: 169629146
Synonym: MAB_2059
Alternate gene names: NA
Gene position: 2057548-2058363 (Clockwise)
Preceding gene: 169629145
Following gene: 169629147
Centisome position: 40.61
GC content: 71.81
Gene sequence:
>816_bases ATGGCGGTGAGCATGCAGTCGGTTATCACCGACATCGAAGCGGAGACGGCAGCCCTACGCGGATTGGTCGCGCCGCTGAC CGAAGGTCCGCGCGGCTGGGACGCGCCGACTCCGGCCGTGGGCTGGACGATCCGCGACCAGATCAGCCATCTGGCGTTCT TCGACGACGTCGCGGTGCGCTCGGCCACCGACCCCGACGGGTTCAGCAGCGACTACCTGCCGATGATGGCCGACGGAGCC ATCTCACCCGACGTCATCGCCGAGCGCTACCGTCAAATGCCGGCTGCCGACCTGCTCGCGTGGTTCGACACGTCGCGTGC CGCCCTCGTTGCGGCGTTCGCGGACATTGCCCCGGCGACCCGCCTGCCGTGGTTCGGGCCGCCGATGAGCGCGGTCTCGT CGCTGACAGCGCGACTCATGGAGACCTGGGCGCACGGCCAGGACGTCGTCGACGCGCTCGGCGCGACCCGCGAGGCCACG GCACGGCTGCGTCACGTGGCCCACATCGGGGTGGGTGCACGCGCGTTCAGCTACCTGGCCAACGGTCTGGACCTGCCCGC GGACCCGGTACGCGTTGAGCTGACCGCTCCGGACGGCAGCGTCTGGACGTGGGGGCCAGCCGACGCGGCCAACCGCGTGA GCGGGCCGGCGCTCGACTTTTGCCTGTTGGTCACCCAACGCCGCCACCGCGACGACACCGCTTTGGTCGCCGACGGCCCG CTGGCCGACCACCAGTGGCTCGCGATCGCCCAGGCCTTCGCGGGGCCCCCTGGCGGCGGGCGCGTGGCGGGCCAGTTTGC AGGGCGTCAGCGGTGA
Upstream 100 bases:
>100_bases GCCGACGAGATATGGGAGCCGGTCTATCTGAGCGACGACGCGCAGGAAGGCCCGGCGGCGTTCCGCGAGAAGCGCGCGCC GCAGTGGAAGGGACACTGAC
Downstream 100 bases:
>100_bases GCGTCCCGGTCCGCATCGGCAACTGCTCCGGCTTTTACGGCGACCGCATCGCCGCAGCCCGCGAGATGGTCGAGGGCGGA CCGATCGACGTCCTGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVRSATDPDGFSSDYLPMMADGA ISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPATRLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREAT ARLRHVAHIGVGARAFSYLANGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR
Sequences:
>Translated_271_residues MAVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVRSATDPDGFSSDYLPMMADGA ISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPATRLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREAT ARLRHVAHIGVGARAFSYLANGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR >Mature_270_residues AVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVRSATDPDGFSSDYLPMMADGAI SPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPATRLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREATA RLRHVAHIGVGARAFSYLANGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGPL ADHQWLAIAQAFAGPPGGGRVAGQFAGRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017517 - InterPro: IPR017518 - InterPro: IPR013917 [H]
Pfam domain/function: PF08608 Wyosine_form [H]
EC number: NA
Molecular weight: Translated: 28762; Mature: 28630
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC SATDPDGFSSDYLPMMADGAISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPAT CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCC RLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREATARLRHVAHIGVGARAFSYLA CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH NGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP CCCCCCCCCEEEEEECCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCC LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR CCCHHHHHHHHHHCCCCCCCCCHHCCCCCCC >Mature Secondary Structure AVSMQSVITDIEAETAALRGLVAPLTEGPRGWDAPTPAVGWTIRDQISHLAFFDDVAVR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC SATDPDGFSSDYLPMMADGAISPDVIAERYRQMPAADLLAWFDTSRAALVAAFADIAPAT CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCC RLPWFGPPMSAVSSLTARLMETWAHGQDVVDALGATREATARLRHVAHIGVGARAFSYLA CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH NGLDLPADPVRVELTAPDGSVWTWGPADAANRVSGPALDFCLLVTQRRHRDDTALVADGP CCCCCCCCCEEEEEECCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCC LADHQWLAIAQAFAGPPGGGRVAGQFAGRQR CCCHHHHHHHHHHCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]