| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629147
Identifier: 169629147
GI number: 169629147
Start: 2058360
End: 2060084
Strand: Direct
Name: 169629147
Synonym: MAB_2060
Alternate gene names: NA
Gene position: 2058360-2060084 (Clockwise)
Preceding gene: 169629146
Following gene: 169629155
Centisome position: 40.62
GC content: 69.45
Gene sequence:
>1725_bases GTGAGCGTCCCGGTCCGCATCGGCAACTGCTCCGGCTTTTACGGCGACCGCATCGCCGCAGCCCGCGAGATGGTCGAGGG CGGACCGATCGACGTCCTGTGCGGTGACTATCTGGCCGAGCTGACCATGCTCATCCTGGCCAAGGCCCAGGCCAAAGACC CGTCCGGCGGGTACGCGCGGACTTTCCTCACCCAAATGGAACAGGTGCTGGGCACCTGTCTCGATCATGGCATCAAGGTC GTCGCGAACGCGGGCGGGCTGAATCCCGCCGGCTTGGCCGCCGCGTTGCGCGAGCTGTCCGCCCGTCTCGGCCTCACCGC GCGCGTCGCTCACGTCGAGGGCGACGACCTACGTGGCGACCTCCACGCAATCACGCCGCCCGTCGGCGACATCAAACCGG TATCGGCCAACGCGTACCTCGGCGCCTGGGGCATCACCGAGGCGCTGCGTTCGGGCGCCGACGTCGTCGTGACCGGCCGG GTCACCGACGCATCCCTGGTCGTCGGTCCAGCCGCCTGGTGGCACGCCTGGGCACCCGCCGACTGGGATCGGCTCGCGGG CGCGGTCGTCGCCGGGCACGTGATCGAGTGCGGCCCTCAGGCGACGGGCGGCAACTACGCGTTCCTGGACGAGATCACGG ACCGCCGCTACCCGGGGTTTCCGATCGCCGAGGTCGCCGAGGACGGCTCTTCGGTGATCACGAAGCATCCCGGCACCGGG GGACTGGTCTCAGTCGGCACGGTCACCGCCCAGCTGCTCTACGAGACCGCTGAACCTGCCTACCTCGGCCCCGACGTCGT CGCCCACTTCGACACCATCCGGCTGGCTCAACAGGGTGAGCACCGCGTCGCGATCAGCGGTACGAAAGGCAGTCCGCCGC CGGACACGTTGAAGGTGGCGTTGAATGAGGTGGGCGGCTTCCGTAACACAATGACCATGGTGCTCACCGGCCTCGACATC GGGGCCAAGGCGGCTTTCGCCGAACAGCAGCTCTTCGACGTTCTCGGCGGACGCGACGCCTTCGACGAAGTCGACGTGAG GCTGTTGCGTTTCGACGTCTCCGACGCACCGACGAACGAGCAAGCCTGCGCGCACCTGCGTGTGACGGTGAAGGACGCCG ACCCGCGCAAGGTGGGCCGAGCCTTCTCCGGGGGGGTCATGGAGATCGCCCTGGCTGGTTTCGCCGGCTTCCACACCACC ACGCCACCGTCCTCGGAGACCGCCTTCGGCGTCTACCGGCCGGCCTACGTAGCGCGGTCGGCCCTCACGCACGTACTCGT CGACGCCGACGGCACACGGCACGAGATCCCCGACCCGCCGACCGGTGCCGTCCCGCCGGCTAGGATCGCCGCGCTCGCGA AGCTGCCAGTGCCGTCCGGGCCGACACGTCGCGCGCCGCTCGGGTCGGTACTCGGCGCGCGGTCCGGAGACAAGGGCGGC AACGCTAACCTCGGCCTGTGGGCACGGGATGACCCTGGGTACGCGTGGGCGCGTGACTACCTCAGCGTCGAGCGGCTGCG CACTCTGCTCGGGCCGGAGACGGCGCACCTGCCCATGGAGCGCTTCGAACTGCCGAACCTGCGCGCCCTCAACGTGGTGG TGCACGGCTTGCTCGGTGACGGGGTGGCCTCCTCGACCCGGCTGGACGCACAGGCCAAGGGGCTCGGGGAATACGTGCGG TCCCGCATGGTGGACATTCCCCAGTCGCTGCTCGACACACACTAA
Upstream 100 bases:
>100_bases ACGGCCCGCTGGCCGACCACCAGTGGCTCGCGATCGCCCAGGCCTTCGCGGGGCCCCCTGGCGGCGGGCGCGTGGCGGGC CAGTTTGCAGGGCGTCAGCG
Downstream 100 bases:
>100_bases ATCCGGTGCGGGGCGCCGTCTACCTGCTGTGTAACCGCGCGGCTGAACAGCGCCGCAACGGCCGCGGCGGCCAGCATCGC CTCAATCGTCGCGTCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MSVPVRIGNCSGFYGDRIAAAREMVEGGPIDVLCGDYLAELTMLILAKAQAKDPSGGYARTFLTQMEQVLGTCLDHGIKV VANAGGLNPAGLAAALRELSARLGLTARVAHVEGDDLRGDLHAITPPVGDIKPVSANAYLGAWGITEALRSGADVVVTGR VTDASLVVGPAAWWHAWAPADWDRLAGAVVAGHVIECGPQATGGNYAFLDEITDRRYPGFPIAEVAEDGSSVITKHPGTG GLVSVGTVTAQLLYETAEPAYLGPDVVAHFDTIRLAQQGEHRVAISGTKGSPPPDTLKVALNEVGGFRNTMTMVLTGLDI GAKAAFAEQQLFDVLGGRDAFDEVDVRLLRFDVSDAPTNEQACAHLRVTVKDADPRKVGRAFSGGVMEIALAGFAGFHTT TPPSSETAFGVYRPAYVARSALTHVLVDADGTRHEIPDPPTGAVPPARIAALAKLPVPSGPTRRAPLGSVLGARSGDKGG NANLGLWARDDPGYAWARDYLSVERLRTLLGPETAHLPMERFELPNLRALNVVVHGLLGDGVASSTRLDAQAKGLGEYVR SRMVDIPQSLLDTH
Sequences:
>Translated_574_residues MSVPVRIGNCSGFYGDRIAAAREMVEGGPIDVLCGDYLAELTMLILAKAQAKDPSGGYARTFLTQMEQVLGTCLDHGIKV VANAGGLNPAGLAAALRELSARLGLTARVAHVEGDDLRGDLHAITPPVGDIKPVSANAYLGAWGITEALRSGADVVVTGR VTDASLVVGPAAWWHAWAPADWDRLAGAVVAGHVIECGPQATGGNYAFLDEITDRRYPGFPIAEVAEDGSSVITKHPGTG GLVSVGTVTAQLLYETAEPAYLGPDVVAHFDTIRLAQQGEHRVAISGTKGSPPPDTLKVALNEVGGFRNTMTMVLTGLDI GAKAAFAEQQLFDVLGGRDAFDEVDVRLLRFDVSDAPTNEQACAHLRVTVKDADPRKVGRAFSGGVMEIALAGFAGFHTT TPPSSETAFGVYRPAYVARSALTHVLVDADGTRHEIPDPPTGAVPPARIAALAKLPVPSGPTRRAPLGSVLGARSGDKGG NANLGLWARDDPGYAWARDYLSVERLRTLLGPETAHLPMERFELPNLRALNVVVHGLLGDGVASSTRLDAQAKGLGEYVR SRMVDIPQSLLDTH >Mature_573_residues SVPVRIGNCSGFYGDRIAAAREMVEGGPIDVLCGDYLAELTMLILAKAQAKDPSGGYARTFLTQMEQVLGTCLDHGIKVV ANAGGLNPAGLAAALRELSARLGLTARVAHVEGDDLRGDLHAITPPVGDIKPVSANAYLGAWGITEALRSGADVVVTGRV TDASLVVGPAAWWHAWAPADWDRLAGAVVAGHVIECGPQATGGNYAFLDEITDRRYPGFPIAEVAEDGSSVITKHPGTGG LVSVGTVTAQLLYETAEPAYLGPDVVAHFDTIRLAQQGEHRVAISGTKGSPPPDTLKVALNEVGGFRNTMTMVLTGLDIG AKAAFAEQQLFDVLGGRDAFDEVDVRLLRFDVSDAPTNEQACAHLRVTVKDADPRKVGRAFSGGVMEIALAGFAGFHTTT PPSSETAFGVYRPAYVARSALTHVLVDADGTRHEIPDPPTGAVPPARIAALAKLPVPSGPTRRAPLGSVLGARSGDKGGN ANLGLWARDDPGYAWARDYLSVERLRTLLGPETAHLPMERFELPNLRALNVVVHGLLGDGVASSTRLDAQAKGLGEYVRS RMVDIPQSLLDTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60317; Mature: 60186
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPVRIGNCSGFYGDRIAAAREMVEGGPIDVLCGDYLAELTMLILAKAQAKDPSGGYAR CCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHH TFLTQMEQVLGTCLDHGIKVVANAGGLNPAGLAAALRELSARLGLTARVAHVEGDDLRGD HHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC LHAITPPVGDIKPVSANAYLGAWGITEALRSGADVVVTGRVTDASLVVGPAAWWHAWAPA CEECCCCCCCCCCCCCCCEECHHHHHHHHHCCCCEEEEECCCCCEEEECCHHHHHCCCCC DWDRLAGAVVAGHVIECGPQATGGNYAFLDEITDRRYPGFPIAEVAEDGSSVITKHPGTG CHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCCCCHHHHHCCCCCEEEECCCCC GLVSVGTVTAQLLYETAEPAYLGPDVVAHFDTIRLAQQGEHRVAISGTKGSPPPDTLKVA CEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH LNEVGGFRNTMTMVLTGLDIGAKAAFAEQQLFDVLGGRDAFDEVDVRLLRFDVSDAPTNE HHHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCEEEEEEECCCCCCCC QACAHLRVTVKDADPRKVGRAFSGGVMEIALAGFAGFHTTTPPSSETAFGVYRPAYVARS CCEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHH ALTHVLVDADGTRHEIPDPPTGAVPPARIAALAKLPVPSGPTRRAPLGSVLGARSGDKGG HHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCC NANLGLWARDDPGYAWARDYLSVERLRTLLGPETAHLPMERFELPNLRALNVVVHGLLGD CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEHHHHHHHHHCC GVASSTRLDAQAKGLGEYVRSRMVDIPQSLLDTH CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure SVPVRIGNCSGFYGDRIAAAREMVEGGPIDVLCGDYLAELTMLILAKAQAKDPSGGYAR CCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHH TFLTQMEQVLGTCLDHGIKVVANAGGLNPAGLAAALRELSARLGLTARVAHVEGDDLRGD HHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC LHAITPPVGDIKPVSANAYLGAWGITEALRSGADVVVTGRVTDASLVVGPAAWWHAWAPA CEECCCCCCCCCCCCCCCEECHHHHHHHHHCCCCEEEEECCCCCEEEECCHHHHHCCCCC DWDRLAGAVVAGHVIECGPQATGGNYAFLDEITDRRYPGFPIAEVAEDGSSVITKHPGTG CHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCCCCHHHHHCCCCCEEEECCCCC GLVSVGTVTAQLLYETAEPAYLGPDVVAHFDTIRLAQQGEHRVAISGTKGSPPPDTLKVA CEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH LNEVGGFRNTMTMVLTGLDIGAKAAFAEQQLFDVLGGRDAFDEVDVRLLRFDVSDAPTNE HHHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCEEEEEEECCCCCCCC QACAHLRVTVKDADPRKVGRAFSGGVMEIALAGFAGFHTTTPPSSETAFGVYRPAYVARS CCEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHH ALTHVLVDADGTRHEIPDPPTGAVPPARIAALAKLPVPSGPTRRAPLGSVLGARSGDKGG HHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCC NANLGLWARDDPGYAWARDYLSVERLRTLLGPETAHLPMERFELPNLRALNVVVHGLLGD CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEHHHHHHHHHCC GVASSTRLDAQAKGLGEYVRSRMVDIPQSLLDTH CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA