| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628537
Identifier: 169628537
GI number: 169628537
Start: 1451322
End: 1451768
Strand: Direct
Name: 169628537
Synonym: MAB_1446
Alternate gene names: NA
Gene position: 1451322-1451768 (Clockwise)
Preceding gene: 169628536
Following gene: 169628538
Centisome position: 28.64
GC content: 62.42
Gene sequence:
>447_bases GTGACACCCCAGGTGACAACGCCCGACGCCCCGCTGGTTCTTCCGGCATTGGCGTTTCGTCCGTTGCGTCTGGCGGCTTT GTGTGGCGTGCTCGGTGCCCTGGCTCTGCTGGCCTCCGCTCTCCTGGGGCAGTGGCAGTTCGGCGTCTTCTTCGTTACTG GGCTTGGACTCGGATTGGTGAACGCTCTCCTCGTTCGCCAGTCCGCGGAAGTGATTACCGCGCAAGACAATCCAAGCAAG CAAAAGATGGCCATCAATTCCGCTGCGCGGTTGATGATCATCACCGTCCTCGCCCTGGTGCTCGCCTTCGTGTTCCGCCC CGCCGGACTCGGGGTGTTCTTCGGGGTTGCGTTGTTCCAGGTGCTGCTGGTGTTGACCACCGCCGTGCCGGTGTGGAAAG GGATCCGTTCAGTGAATCAGCCGCAGGCTCAGGTTGAGGGGGCATAG
Upstream 100 bases:
>100_bases GCTGCCCATTGAGGTGAGTTCAGCGAGCCCTCAGACCTCCTATAAGGTCTGGAACCGACGAACGCATTTTTTTGTTCCGC CACCCCGACAAAGATGTGAG
Downstream 100 bases:
>100_bases CCCAGCATGATTACGACATTCCAGGCGGAAGCCGCCATCGAGGTCGGTCACCACAAGCACTGGACCTGGCACGGTGATTT CTGGCCGTACGAGCTGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTPQVTTPDAPLVLPALAFRPLRLAALCGVLGALALLASALLGQWQFGVFFVTGLGLGLVNALLVRQSAEVITAQDNPSK QKMAINSAARLMIITVLALVLAFVFRPAGLGVFFGVALFQVLLVLTTAVPVWKGIRSVNQPQAQVEGA
Sequences:
>Translated_148_residues MTPQVTTPDAPLVLPALAFRPLRLAALCGVLGALALLASALLGQWQFGVFFVTGLGLGLVNALLVRQSAEVITAQDNPSK QKMAINSAARLMIITVLALVLAFVFRPAGLGVFFGVALFQVLLVLTTAVPVWKGIRSVNQPQAQVEGA >Mature_147_residues TPQVTTPDAPLVLPALAFRPLRLAALCGVLGALALLASALLGQWQFGVFFVTGLGLGLVNALLVRQSAEVITAQDNPSKQ KMAINSAARLMIITVLALVLAFVFRPAGLGVFFGVALFQVLLVLTTAVPVWKGIRSVNQPQAQVEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1138 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005598 [H]
Pfam domain/function: PF03899 ATP_synt_I [H]
EC number: NA
Molecular weight: Translated: 15518; Mature: 15387
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQVTTPDAPLVLPALAFRPLRLAALCGVLGALALLASALLGQWQFGVFFVTGLGLGLV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NALLVRQSAEVITAQDNPSKQKMAINSAARLMIITVLALVLAFVFRPAGLGVFFGVALFQ HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLLVLTTAVPVWKGIRSVNQPQAQVEGA HHHHHHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure TPQVTTPDAPLVLPALAFRPLRLAALCGVLGALALLASALLGQWQFGVFFVTGLGLGLV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NALLVRQSAEVITAQDNPSKQKMAINSAARLMIITVLALVLAFVFRPAGLGVFFGVALFQ HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLLVLTTAVPVWKGIRSVNQPQAQVEGA HHHHHHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]