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The map label for this gene is cdaR [C]

Identifier: 169628482

GI number: 169628482

Start: 1387255

End: 1388409

Strand: Direct

Name: cdaR [C]

Synonym: MAB_1391

Alternate gene names: 169628482

Gene position: 1387255-1388409 (Clockwise)

Preceding gene: 169628478

Following gene: 169628486

Centisome position: 27.38

GC content: 68.05

Gene sequence:

>1155_bases
ATGACGGCGTCACTCAGTGATCGGTTCATGCGCCGGCTGCCGGAGACGGCGCGTCGCGCGGTGGACTGTTTCGCTGCCGA
GGTGCCGTACTACGGGATGCTGCCGCGTGAGGTTCTCGACGGCGAGATAACCGAGTTCACCAAGCAGCATTTCCGGATAT
TCGCCCGGGTCATGCTGGAGTCGCGTGCGCCCACCGACGACGAGTTCGCGGTATCGATCCTGGCCGCGTCCCGCCGGGCG
CAGGAAGATATCCCGCTGCCTGCGGTGCTGGCCGTCTACAACGTCGCAGCGCGGGTGGGCATCGAGACCCTCCGGGAACT
GGCAACTCCCGACGAGGTGGACGAGGTATTGGCTGTGAGCGTGCAGCTCCAGCGCTATCTGCAATTGATGCTGCCCGCCG
TCACCGCCGCGTATCTCGAAGAGCGTCAGGGCGTTTATGGTGCGGCGGCAGATGCCCGCCGTGACCTCTTCGAGGCGTTG
GTCAAGGGAATGCCGTGGGAGGAGGCGGCCGAACGGGCGAGCGTCACGCTGGCGCTGTCGTATCACGTGCTGTTCCTGTA
CATGCCCGAACCCGCGACCAACACCGTGGTGGCGCGGCGGCGCGCACACCGCGTGCAGGACATCGTCGACGAGTATGCGC
GCGAGCCCGTGCTGGCCGCGCTGGATGGTCGCGGCGGCACCATCTTGCTGCCCGCGGTGGGCAAGGTGGAATCACTGCTG
CCGTTGTTCTCGGAAGTGGCCGGGGGGCCGGTCACGATCGGGCTGTCCGAGGCGGCCGATCCCGCGGAGATCGCCGCCGC
TGCCGATGAGGCGCGCGAATTGGCCTTGCTCGCACTGCGACTCGGCCGGGCGCCGGGGGCGTATCGACTCTCCGATTTAC
TGTTGGAGTACCAGATCACCCGGCCGGGCAGGGCACGCGACCTGCTGGCCGCGACCGTTCAGCCGCTCGCCGCGCACCCA
CACCTGCAGCAGGCGCTCAGCGCCTACCTGCAGCACGAGCACGGCCGGCAGCTGGCCGCCAAATCACTACATGTGCATCC
CAACACCCTCGACTACAGGTTGCGCCGGGTTGCCGAGCTGACCGGATTGGATCCGGCGCAACCGTCCGCGGCGCGGACGC
TCGCCGCGGCGCTCTTGGCGGTCAAGGCACGCTGA

Upstream 100 bases:

>100_bases
ACTCACCGGGGAGGCGGTAGGGTGCGCAATGGTCTCATGGATGTGATCCGTGGGGGGTCGGATATTCCACGCTGCGGTGG
GAGAAGGTTGGAGTCCGCTG

Downstream 100 bases:

>100_bases
GAATCAGAGCTTCCCGCTGAGCAGCTGGATGATCCCCCGCTGCCAGCGCATGAACATCCGGATGGCCCGCAGGGTCAATG
AGGTGGAGAACACCGTCTGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator CdaR; CdaR Family Transcriptional Regulator; Transcriptional Regulator PucR Family; PucR Family Transcriptional Regulator

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTASLSDRFMRRLPETARRAVDCFAAEVPYYGMLPREVLDGEITEFTKQHFRIFARVMLESRAPTDDEFAVSILAASRRA
QEDIPLPAVLAVYNVAARVGIETLRELATPDEVDEVLAVSVQLQRYLQLMLPAVTAAYLEERQGVYGAAADARRDLFEAL
VKGMPWEEAAERASVTLALSYHVLFLYMPEPATNTVVARRRAHRVQDIVDEYAREPVLAALDGRGGTILLPAVGKVESLL
PLFSEVAGGPVTIGLSEAADPAEIAAAADEARELALLALRLGRAPGAYRLSDLLLEYQITRPGRARDLLAATVQPLAAHP
HLQQALSAYLQHEHGRQLAAKSLHVHPNTLDYRLRRVAELTGLDPAQPSAARTLAAALLAVKAR

Sequences:

>Translated_384_residues
MTASLSDRFMRRLPETARRAVDCFAAEVPYYGMLPREVLDGEITEFTKQHFRIFARVMLESRAPTDDEFAVSILAASRRA
QEDIPLPAVLAVYNVAARVGIETLRELATPDEVDEVLAVSVQLQRYLQLMLPAVTAAYLEERQGVYGAAADARRDLFEAL
VKGMPWEEAAERASVTLALSYHVLFLYMPEPATNTVVARRRAHRVQDIVDEYAREPVLAALDGRGGTILLPAVGKVESLL
PLFSEVAGGPVTIGLSEAADPAEIAAAADEARELALLALRLGRAPGAYRLSDLLLEYQITRPGRARDLLAATVQPLAAHP
HLQQALSAYLQHEHGRQLAAKSLHVHPNTLDYRLRRVAELTGLDPAQPSAARTLAAALLAVKAR
>Mature_383_residues
TASLSDRFMRRLPETARRAVDCFAAEVPYYGMLPREVLDGEITEFTKQHFRIFARVMLESRAPTDDEFAVSILAASRRAQ
EDIPLPAVLAVYNVAARVGIETLRELATPDEVDEVLAVSVQLQRYLQLMLPAVTAAYLEERQGVYGAAADARRDLFEALV
KGMPWEEAAERASVTLALSYHVLFLYMPEPATNTVVARRRAHRVQDIVDEYAREPVLAALDGRGGTILLPAVGKVESLLP
LFSEVAGGPVTIGLSEAADPAEIAAAADEARELALLALRLGRAPGAYRLSDLLLEYQITRPGRARDLLAATVQPLAAHPH
LQQALSAYLQHEHGRQLAAKSLHVHPNTLDYRLRRVAELTGLDPAQPSAARTLAAALLAVKAR

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41987; Mature: 41856

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASLSDRFMRRLPETARRAVDCFAAEVPYYGMLPREVLDGEITEFTKQHFRIFARVMLE
CCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
SRAPTDDEFAVSILAASRRAQEDIPLPAVLAVYNVAARVGIETLRELATPDEVDEVLAVS
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VQLQRYLQLMLPAVTAAYLEERQGVYGAAADARRDLFEALVKGMPWEEAAERASVTLALS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEE
YHVLFLYMPEPATNTVVARRRAHRVQDIVDEYAREPVLAALDGRGGTILLPAVGKVESLL
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHHH
PLFSEVAGGPVTIGLSEAADPAEIAAAADEARELALLALRLGRAPGAYRLSDLLLEYQIT
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEC
RPGRARDLLAATVQPLAAHPHLQQALSAYLQHEHGRQLAAKSLHVHPNTLDYRLRRVAEL
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TGLDPAQPSAARTLAAALLAVKAR
HCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TASLSDRFMRRLPETARRAVDCFAAEVPYYGMLPREVLDGEITEFTKQHFRIFARVMLE
CCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
SRAPTDDEFAVSILAASRRAQEDIPLPAVLAVYNVAARVGIETLRELATPDEVDEVLAVS
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VQLQRYLQLMLPAVTAAYLEERQGVYGAAADARRDLFEALVKGMPWEEAAERASVTLALS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEE
YHVLFLYMPEPATNTVVARRRAHRVQDIVDEYAREPVLAALDGRGGTILLPAVGKVESLL
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHHH
PLFSEVAGGPVTIGLSEAADPAEIAAAADEARELALLALRLGRAPGAYRLSDLLLEYQIT
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEC
RPGRARDLLAATVQPLAAHPHLQQALSAYLQHEHGRQLAAKSLHVHPNTLDYRLRRVAEL
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TGLDPAQPSAARTLAAALLAVKAR
HCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA