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The map label for this gene is opuCC [H]

Identifier: 169628321

GI number: 169628321

Start: 1239866

End: 1240807

Strand: Direct

Name: opuCC [H]

Synonym: MAB_1228

Alternate gene names: 169628321

Gene position: 1239866-1240807 (Clockwise)

Preceding gene: 169628320

Following gene: 169628322

Centisome position: 24.47

GC content: 62.1

Gene sequence:

>942_bases
GTGGTGCTTGCCTGCTTGGTGATGATGCTGCAGGCAGGCTGCGGTCTCCAGTCCGCGAGCGGCGCGGTACTCGCCGCCAA
GCCGGGCCTGATCCGGCACTACGATTCGCTTCGCGATGTGAATATCACGGTAGCGGCAAAGGATTTCACCGAGCAGCTGG
TGCTGGGTAACATCGTCGCGATCATTCTCAATGCGGCCGGCGCCAGTGTCACCAATATGACCAACACCCCAGGAAGTTTC
GGAGTGCGGCAGTCGATGCTGAAGAGGGTGGCCAATGTCTCGCCCGAGTACACCGGAACCGGATGGATCAATTATCTGGG
GCACGCCGACCCCATCAAGGATCCCGTCGCGCAGTGGAAAGCGGTCAACGAGGAGGATGCGGCCAACCGGCTGGTCTGGT
TGCCTCCCGCGCCCATGAACAACACCTACGCGTTCGCCATCCGGGAGTCGGAAGCCGAACGGCTGGCGGTGACCAAGCTG
TCCGATTTGCGCGGCCTCGCACGCAACGATCTGACGTTCTGTGTGGAAAGCGAATTCGCCAGCCGTAACGACGGGTTCGT
GCCGATGCTCAAGACGTATGGTCTGTCCACCGGGCAACTGGGCCGGATCACCAACCTGGATGTAGGAGTGGTGTATACCG
CCACCGCCAAGGGCGATTGCAACTTCGGCGAGGTATTTACCACCGACGGTCGCATCCCGGCGCTGAAGTTGCGTGTCCTG
CAGGACGACCGGCACTTCTTTCCGCTCTACAACCTGACCGAGGTCATCGATGCCGACCTGTTGGCGGCGCACCCCGAGTT
GAGCGAGATCTTCGCCCTGCTGAACCCGCGGCTGACCAACGACACCATGTTGGCGCTGAACGCCAGGGTCGATTCGGCCG
GCGAAGATCCGGCGATCGTGGCACGCGACTGGCTGATCGACCAGGGTCTGCTCAGCCGCTAG

Upstream 100 bases:

>100_bases
CCATCCTGGTGGCTGCTCTGGCCTTGTTCATCGACTGGCTGGCCCGCGTCGTCGAGATCATCGCAGCACCAAGGGGGCTG
TGATGCGAAGGCGTCGACTT

Downstream 100 bases:

>100_bases
CACGTGACGATCCGGCACCTGTCACACTGTTGTTAATGGTGGCGATGTCGGCACTGGTCTTCGGGCTCAGCTGGTGGTTG
GGTCTGTACTTACTCGCGCG

Product: putative ABC transporter

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MVLACLVMMLQAGCGLQSASGAVLAAKPGLIRHYDSLRDVNITVAAKDFTEQLVLGNIVAIILNAAGASVTNMTNTPGSF
GVRQSMLKRVANVSPEYTGTGWINYLGHADPIKDPVAQWKAVNEEDAANRLVWLPPAPMNNTYAFAIRESEAERLAVTKL
SDLRGLARNDLTFCVESEFASRNDGFVPMLKTYGLSTGQLGRITNLDVGVVYTATAKGDCNFGEVFTTDGRIPALKLRVL
QDDRHFFPLYNLTEVIDADLLAAHPELSEIFALLNPRLTNDTMLALNARVDSAGEDPAIVARDWLIDQGLLSR

Sequences:

>Translated_313_residues
MVLACLVMMLQAGCGLQSASGAVLAAKPGLIRHYDSLRDVNITVAAKDFTEQLVLGNIVAIILNAAGASVTNMTNTPGSF
GVRQSMLKRVANVSPEYTGTGWINYLGHADPIKDPVAQWKAVNEEDAANRLVWLPPAPMNNTYAFAIRESEAERLAVTKL
SDLRGLARNDLTFCVESEFASRNDGFVPMLKTYGLSTGQLGRITNLDVGVVYTATAKGDCNFGEVFTTDGRIPALKLRVL
QDDRHFFPLYNLTEVIDADLLAAHPELSEIFALLNPRLTNDTMLALNARVDSAGEDPAIVARDWLIDQGLLSR
>Mature_313_residues
MVLACLVMMLQAGCGLQSASGAVLAAKPGLIRHYDSLRDVNITVAAKDFTEQLVLGNIVAIILNAAGASVTNMTNTPGSF
GVRQSMLKRVANVSPEYTGTGWINYLGHADPIKDPVAQWKAVNEEDAANRLVWLPPAPMNNTYAFAIRESEAERLAVTKL
SDLRGLARNDLTFCVESEFASRNDGFVPMLKTYGLSTGQLGRITNLDVGVVYTATAKGDCNFGEVFTTDGRIPALKLRVL
QDDRHFFPLYNLTEVIDADLLAAHPELSEIFALLNPRLTNDTMLALNARVDSAGEDPAIVARDWLIDQGLLSR

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=276, Percent_Identity=30.0724637681159, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33966; Mature: 33966

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLACLVMMLQAGCGLQSASGAVLAAKPGLIRHYDSLRDVNITVAAKDFTEQLVLGNIVA
CHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEEEEECHHHHHHHHHHHHH
IILNAAGASVTNMTNTPGSFGVRQSMLKRVANVSPEYTGTGWINYLGHADPIKDPVAQWK
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHH
AVNEEDAANRLVWLPPAPMNNTYAFAIRESEAERLAVTKLSDLRGLARNDLTFCVESEFA
CCCCCHHCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCC
SRNDGFVPMLKTYGLSTGQLGRITNLDVGVVYTATAKGDCNFGEVFTTDGRIPALKLRVL
CCCCCCEEHHHHCCCCCCCCCCEECCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEEE
QDDRHFFPLYNLTEVIDADLLAAHPELSEIFALLNPRLTNDTMLALNARVDSAGEDPAIV
ECCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEE
ARDWLIDQGLLSR
EHHHHHCCHHCCC
>Mature Secondary Structure
MVLACLVMMLQAGCGLQSASGAVLAAKPGLIRHYDSLRDVNITVAAKDFTEQLVLGNIVA
CHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEEEEECHHHHHHHHHHHHH
IILNAAGASVTNMTNTPGSFGVRQSMLKRVANVSPEYTGTGWINYLGHADPIKDPVAQWK
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHH
AVNEEDAANRLVWLPPAPMNNTYAFAIRESEAERLAVTKLSDLRGLARNDLTFCVESEFA
CCCCCHHCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCC
SRNDGFVPMLKTYGLSTGQLGRITNLDVGVVYTATAKGDCNFGEVFTTDGRIPALKLRVL
CCCCCCEEHHHHCCCCCCCCCCEECCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEEE
QDDRHFFPLYNLTEVIDADLLAAHPELSEIFALLNPRLTNDTMLALNARVDSAGEDPAIV
ECCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEE
ARDWLIDQGLLSR
EHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]