| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628322
Identifier: 169628322
GI number: 169628322
Start: 1240843
End: 1242240
Strand: Direct
Name: 169628322
Synonym: MAB_1229
Alternate gene names: NA
Gene position: 1240843-1242240 (Clockwise)
Preceding gene: 169628321
Following gene: 169628324
Centisome position: 24.49
GC content: 65.95
Gene sequence:
>1398_bases ATGGTGGCGATGTCGGCACTGGTCTTCGGGCTCAGCTGGTGGTTGGGTCTGTACTTACTCGCGCGAAATCCCCGCAAGCC GGTCCTGGTGCTGGCGGCCATCGGCCTTATCGGCTACTCCGTCGTGGTGGCGCTCGACGCCATCCGCGTGACGCCGGGCT CCGATGCCGAACTGCTGGGCCGCATTGAGGTTTTCACCGCGATCATTCCGAGTGTCGCCTGGCTGATGGTGCTGCTTGAG CTCACCAACAGCGGTGATCGGTGGCGCGATCGCGCCGCCATGGCGGTGCCCGGGGTGGTGCTGGCCGTGGTACTGCTGGT GGGCGCGTCGCTGGCGGGTACCATCGCGGGGCCCGCACGGCTGGGGCATTGGATCATGTTCTGCGCCAACGGGACTGCCG CGATCGGAGCGGCCATTCTGCTGTTCCGCCGGCGTGCCTCGATACCGGGCTCGGCGCGTGGTGTCGTGCTGGTGGCCACC ATGTTCTTCACGCTCGGCGATGCTCAGCTGATCATCCCGCTGGGGATCGTGCCGAGCTGGCTGGCCTTGGCATCGACGGG CTTCGACCTGGTGCTGCTCGGTCTGGGCGTAGCGCTCTGGGACGCCTTCGACGAAGGCCAGGCGCTGCGCGGTGACATGC TGCGCTCCTTTGTCGCCTCAATACTTGTGGGCGCGTTGTTCGGTGCGCAGGCGATGATCGGCATCGCTGTCGTCGGCCAG TCGGTCGCGTTGGTGGTGCTGCTGTTCACCAGTATCGGCCTGGCCATCTGCATCCAGGTGCAGTCGGGCCCGTTCGCGGA TTTCCTGGACCGATTGGCGTTCTCACGGTCTCCGCAGCTGCGTCAGGAACGTTCCGAACTGCGCAGTACCGAGGCGGCAT TGCCGCTCAAGTCGGCGTCGCCGATCGCCGGAGTCGATGACGAGAGCTTCATCAGGCTCACGCGCCGCGCGCTCAGCCAC TACGGCGACCTCGCCAAACTCGTCGCCAGTCCGCTGGCCGCACTGCCCGTCATCGATGAGCGGCTCGCCGGTCGCGGCGC CTCGGACCAGCCCGTCGAACGCGCCAATGAGCTCAGAGCGGTACTCGCCGAGTCCATCTCACGGCTCAAACCTCGCAATG ACGGCGACTTCGGTACCACCGATCAATGGCGCTACTACAACGCGCTGTACTTCCCGTACGTCATGGGTGTACGGGCATAT GCCCAGGGGGCCACGGCTGCCGGCTTGGACCCGGTATCCCGTCAGGCGTGGCAGTGGCTGGTCACCGAGGTACCCCAGCG TTCCTTGCACAACTGGCAGAACGCGGCGGCGAAACTTATCGCGGCGGATCTGCGTGCACAGATCGCCTCGATGCCGAATG GGTTGAGCACCAACGGCTCCTCACCAGTTGCGCGGTAG
Upstream 100 bases:
>100_bases CCGGCGAAGATCCGGCGATCGTGGCACGCGACTGGCTGATCGACCAGGGTCTGCTCAGCCGCTAGCACGTGACGATCCGG CACCTGTCACACTGTTGTTA
Downstream 100 bases:
>100_bases CCGGCCCCGCTCGCGGCGCCATCCGTCGTGGCTGGCCGGATGCCAGCGCCATGATGTCGGGATGAACGGCCACGCTAGCG GCACCGCACGCAGCAGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MVAMSALVFGLSWWLGLYLLARNPRKPVLVLAAIGLIGYSVVVALDAIRVTPGSDAELLGRIEVFTAIIPSVAWLMVLLE LTNSGDRWRDRAAMAVPGVVLAVVLLVGASLAGTIAGPARLGHWIMFCANGTAAIGAAILLFRRRASIPGSARGVVLVAT MFFTLGDAQLIIPLGIVPSWLALASTGFDLVLLGLGVALWDAFDEGQALRGDMLRSFVASILVGALFGAQAMIGIAVVGQ SVALVVLLFTSIGLAICIQVQSGPFADFLDRLAFSRSPQLRQERSELRSTEAALPLKSASPIAGVDDESFIRLTRRALSH YGDLAKLVASPLAALPVIDERLAGRGASDQPVERANELRAVLAESISRLKPRNDGDFGTTDQWRYYNALYFPYVMGVRAY AQGATAAGLDPVSRQAWQWLVTEVPQRSLHNWQNAAAKLIAADLRAQIASMPNGLSTNGSSPVAR
Sequences:
>Translated_465_residues MVAMSALVFGLSWWLGLYLLARNPRKPVLVLAAIGLIGYSVVVALDAIRVTPGSDAELLGRIEVFTAIIPSVAWLMVLLE LTNSGDRWRDRAAMAVPGVVLAVVLLVGASLAGTIAGPARLGHWIMFCANGTAAIGAAILLFRRRASIPGSARGVVLVAT MFFTLGDAQLIIPLGIVPSWLALASTGFDLVLLGLGVALWDAFDEGQALRGDMLRSFVASILVGALFGAQAMIGIAVVGQ SVALVVLLFTSIGLAICIQVQSGPFADFLDRLAFSRSPQLRQERSELRSTEAALPLKSASPIAGVDDESFIRLTRRALSH YGDLAKLVASPLAALPVIDERLAGRGASDQPVERANELRAVLAESISRLKPRNDGDFGTTDQWRYYNALYFPYVMGVRAY AQGATAAGLDPVSRQAWQWLVTEVPQRSLHNWQNAAAKLIAADLRAQIASMPNGLSTNGSSPVAR >Mature_465_residues MVAMSALVFGLSWWLGLYLLARNPRKPVLVLAAIGLIGYSVVVALDAIRVTPGSDAELLGRIEVFTAIIPSVAWLMVLLE LTNSGDRWRDRAAMAVPGVVLAVVLLVGASLAGTIAGPARLGHWIMFCANGTAAIGAAILLFRRRASIPGSARGVVLVAT MFFTLGDAQLIIPLGIVPSWLALASTGFDLVLLGLGVALWDAFDEGQALRGDMLRSFVASILVGALFGAQAMIGIAVVGQ SVALVVLLFTSIGLAICIQVQSGPFADFLDRLAFSRSPQLRQERSELRSTEAALPLKSASPIAGVDDESFIRLTRRALSH YGDLAKLVASPLAALPVIDERLAGRGASDQPVERANELRAVLAESISRLKPRNDGDFGTTDQWRYYNALYFPYVMGVRAY AQGATAAGLDPVSRQAWQWLVTEVPQRSLHNWQNAAAKLIAADLRAQIASMPNGLSTNGSSPVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49475; Mature: 49475
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAMSALVFGLSWWLGLYLLARNPRKPVLVLAAIGLIGYSVVVALDAIRVTPGSDAELLG CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH RIEVFTAIIPSVAWLMVLLELTNSGDRWRDRAAMAVPGVVLAVVLLVGASLAGTIAGPAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHH LGHWIMFCANGTAAIGAAILLFRRRASIPGSARGVVLVATMFFTLGDAQLIIPLGIVPSW HCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHH LALASTGFDLVLLGLGVALWDAFDEGQALRGDMLRSFVASILVGALFGAQAMIGIAVVGQ HHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVALVVLLFTSIGLAICIQVQSGPFADFLDRLAFSRSPQLRQERSELRSTEAALPLKSAS HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC PIAGVDDESFIRLTRRALSHYGDLAKLVASPLAALPVIDERLAGRGASDQPVERANELRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VLAESISRLKPRNDGDFGTTDQWRYYNALYFPYVMGVRAYAQGATAAGLDPVSRQAWQWL HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VTEVPQRSLHNWQNAAAKLIAADLRAQIASMPNGLSTNGSSPVAR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MVAMSALVFGLSWWLGLYLLARNPRKPVLVLAAIGLIGYSVVVALDAIRVTPGSDAELLG CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH RIEVFTAIIPSVAWLMVLLELTNSGDRWRDRAAMAVPGVVLAVVLLVGASLAGTIAGPAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHH LGHWIMFCANGTAAIGAAILLFRRRASIPGSARGVVLVATMFFTLGDAQLIIPLGIVPSW HCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHH LALASTGFDLVLLGLGVALWDAFDEGQALRGDMLRSFVASILVGALFGAQAMIGIAVVGQ HHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVALVVLLFTSIGLAICIQVQSGPFADFLDRLAFSRSPQLRQERSELRSTEAALPLKSAS HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC PIAGVDDESFIRLTRRALSHYGDLAKLVASPLAALPVIDERLAGRGASDQPVERANELRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VLAESISRLKPRNDGDFGTTDQWRYYNALYFPYVMGVRAYAQGATAAGLDPVSRQAWQWL HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VTEVPQRSLHNWQNAAAKLIAADLRAQIASMPNGLSTNGSSPVAR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA