| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628286
Identifier: 169628286
GI number: 169628286
Start: 1207412
End: 1208419
Strand: Reverse
Name: 169628286
Synonym: MAB_1193c
Alternate gene names: NA
Gene position: 1208419-1207412 (Counterclockwise)
Preceding gene: 169628291
Following gene: 169628285
Centisome position: 23.85
GC content: 69.64
Gene sequence:
>1008_bases GTGAGCATCCTCGCCACACGGAGACGGACGATCTGGGCGGCCCTGAGCACCGGGGCCGCAGGCGCGGCGATGGGTACCGG CGTCTGGGGCGCGTACAGCTTCCTGAACGCGCAGGCCAGGCAGGTTCGCCGGGTCATCCCGAAGACTCACGACGCTCCCC CGGTGGCCGATGGGGTGTACGAGCGCGGTGGTGGCCCGGTCACCCGATACACCCGTGGCGTGCAGTACGACCTGCACCTG GCGATCTTCGGCGACTCCACAGCCACCGGGTACGGCTGTCACATACCCGACGAGGTACCGGGGGTGCTGCTGGCACGCGG CTTGGCCGAGGAGTCAGGCAAGCGAATCCGCTTGTCCACCAAGGCGATATCCGGTGCCACCTCCAAGGGACTGGCCGCAC AGATCGATGCCATGTCGATCATCGGCCCACCGCCGGACGCTGCCGTGATCATGATCGGCGCAAACGACGTGACCTCGCTC AACGCGGTGCGGGCTTCCGCCCAGCGCCTGGGTGACGCGGTGCGGCGATTGCGCGCGGCCGGTTCTGTCGTCGTGGTGGG CACCTGCCCCGACTTCGGCGTGATCACCGCCATACCGCAGCCGCTGCGCGCGGTGGTGCGTTCCCGCGGACTGCGCCTGG CGCATTTCCAGGCCGCCGCGGTGCGGGCCACCGGTGGTGTTCCCGTTCCGCTTGCCGACCTGCTGGCGCCGGAGTTTCTG CAGGCGCCCGAAGAGATGTTCGCCGACGACCACTACCACCCCTCGGCCGCCGGGTATGCGCTGGCAGCACGGCTGCTGCT GCCGGCGGTCGCGCATGCCCTGGGCGAATGGACCGGCGGGCCCATCCCGGATTTGCCGTGGGTGTCCGCGGCCGCCGAGT CACAGACCATGAGCGCCCGGTTACGCGTCCTGAGCCGCATCTGGCGGCGCAACGCTACGGAGATCGCGACAAGCATTACC GAGCCCGCAGACCGGCCCGACAATCTGCCCGTCGCATCGCTGCATTAG
Upstream 100 bases:
>100_bases GCAACAAACCGCTTTCGATACCGCATCGTCCACGCCTCATTTCCCGTGATGCTGGTCAGAGGACTGGCGCCGTGTGTCGT GGTCGTTGAAAATAGCCACC
Downstream 100 bases:
>100_bases ATTCCTGGGGAGTAGAACCAGTACTAAATCCCCTATATTCAGGAGTTTTCATGCCCGAAGCCGTGATCGTTTCCACTGCC CGCTCCCCGATCGGGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; Lipolytic Protein G-D-S-L Family; Lipolytic G-D-S-L; Lipolytic; Conserved Exported Protein; Lipid Hydrolase; SGNH Hydrolase; Lipase; LOW QUALITY PROTEIN Secreted Protein; Lysophospholipase L1-Like Esterase
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSILATRRRTIWAALSTGAAGAAMGTGVWGAYSFLNAQARQVRRVIPKTHDAPPVADGVYERGGGPVTRYTRGVQYDLHL AIFGDSTATGYGCHIPDEVPGVLLARGLAEESGKRIRLSTKAISGATSKGLAAQIDAMSIIGPPPDAAVIMIGANDVTSL NAVRASAQRLGDAVRRLRAAGSVVVVGTCPDFGVITAIPQPLRAVVRSRGLRLAHFQAAAVRATGGVPVPLADLLAPEFL QAPEEMFADDHYHPSAAGYALAARLLLPAVAHALGEWTGGPIPDLPWVSAAAESQTMSARLRVLSRIWRRNATEIATSIT EPADRPDNLPVASLH
Sequences:
>Translated_335_residues MSILATRRRTIWAALSTGAAGAAMGTGVWGAYSFLNAQARQVRRVIPKTHDAPPVADGVYERGGGPVTRYTRGVQYDLHL AIFGDSTATGYGCHIPDEVPGVLLARGLAEESGKRIRLSTKAISGATSKGLAAQIDAMSIIGPPPDAAVIMIGANDVTSL NAVRASAQRLGDAVRRLRAAGSVVVVGTCPDFGVITAIPQPLRAVVRSRGLRLAHFQAAAVRATGGVPVPLADLLAPEFL QAPEEMFADDHYHPSAAGYALAARLLLPAVAHALGEWTGGPIPDLPWVSAAAESQTMSARLRVLSRIWRRNATEIATSIT EPADRPDNLPVASLH >Mature_334_residues SILATRRRTIWAALSTGAAGAAMGTGVWGAYSFLNAQARQVRRVIPKTHDAPPVADGVYERGGGPVTRYTRGVQYDLHLA IFGDSTATGYGCHIPDEVPGVLLARGLAEESGKRIRLSTKAISGATSKGLAAQIDAMSIIGPPPDAAVIMIGANDVTSLN AVRASAQRLGDAVRRLRAAGSVVVVGTCPDFGVITAIPQPLRAVVRSRGLRLAHFQAAAVRATGGVPVPLADLLAPEFLQ APEEMFADDHYHPSAAGYALAARLLLPAVAHALGEWTGGPIPDLPWVSAAAESQTMSARLRVLSRIWRRNATEIATSITE PADRPDNLPVASLH
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35116; Mature: 34984
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILATRRRTIWAALSTGAAGAAMGTGVWGAYSFLNAQARQVRRVIPKTHDAPPVADGVY CCCCHHHHHHHEEHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH ERGGGPVTRYTRGVQYDLHLAIFGDSTATGYGCHIPDEVPGVLLARGLAEESGKRIRLST HCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEH KAISGATSKGLAAQIDAMSIIGPPPDAAVIMIGANDVTSLNAVRASAQRLGDAVRRLRAA HHHCCCCCCCCHHECCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC GSVVVVGTCPDFGVITAIPQPLRAVVRSRGLRLAHFQAAAVRATGGVPVPLADLLAPEFL CCEEEEECCCCCCHHHCCCHHHHHHHHHCCCEEEEHHHHHHEECCCCCCCHHHHCCHHHH QAPEEMFADDHYHPSAAGYALAARLLLPAVAHALGEWTGGPIPDLPWVSAAAESQTMSAR CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LRVLSRIWRRNATEIATSITEPADRPDNLPVASLH HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SILATRRRTIWAALSTGAAGAAMGTGVWGAYSFLNAQARQVRRVIPKTHDAPPVADGVY CCCHHHHHHHEEHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH ERGGGPVTRYTRGVQYDLHLAIFGDSTATGYGCHIPDEVPGVLLARGLAEESGKRIRLST HCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEH KAISGATSKGLAAQIDAMSIIGPPPDAAVIMIGANDVTSLNAVRASAQRLGDAVRRLRAA HHHCCCCCCCCHHECCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC GSVVVVGTCPDFGVITAIPQPLRAVVRSRGLRLAHFQAAAVRATGGVPVPLADLLAPEFL CCEEEEECCCCCCHHHCCCHHHHHHHHHCCCEEEEHHHHHHEECCCCCCCHHHHCCHHHH QAPEEMFADDHYHPSAAGYALAARLLLPAVAHALGEWTGGPIPDLPWVSAAAESQTMSAR CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LRVLSRIWRRNATEIATSITEPADRPDNLPVASLH HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA