| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628291
Identifier: 169628291
GI number: 169628291
Start: 1213098
End: 1213769
Strand: Reverse
Name: 169628291
Synonym: MAB_1198c
Alternate gene names: NA
Gene position: 1213769-1213098 (Counterclockwise)
Preceding gene: 169628294
Following gene: 169628286
Centisome position: 23.95
GC content: 65.48
Gene sequence:
>672_bases ATGCCACAGATTGCGGAGGACCTCCTGCTTCTGTTGCTGAACAACGCGTCGGGACGGCCCCTGCTGGACAAGAATCGACG CTCGCAGGCCCTGGCTGCCGCGATCGTATTGGATCTTGCTCTGGCGCAACGCATTCGGCCCGCCACGCACGGGGAACCCA CCAAGGCAGGCCATCTGCTGGTGCTCCAGGCACCCGACATCGGGGATCCGGTACTCGACCGAGCGATACACCGACTGCGG CGGCGGCCGATGGATCCCACCGAGGCGATCGCCAAGGTGGGCCGCGGGGTCGAGTCCCAAATGCTGCACCGGCTGGAGAT CACCGGAGACATCCACACGGTCCGCATGGGCGGCCGACTGTTCCCGGACAAGTACTGGCCGGTGACCAACAACGAGCGCG CCAACGCCGTACGCCAGGGGGTTACCGATGTGTTGTTCCACTACGCTCCGCCCTCACCCAGCACTGCCGCGATCATCGCG GTGCTGCACGGGGTCAATGGATTCGACGCGATCTTGAGTCTGGATCCCATCGGCAAGCAGCAGGTTTCTCGCTGGTCGCA AACGATCGCCGACGGCGGGTGGGCGGCCCAGACCCGCGACAACCGGGGCCCGGCAGTCAATCTCGCGGTGACCGCCGCGG TGATCTCGGCGGCCCTACATTCGATGTCTTAA
Upstream 100 bases:
>100_bases ACCTCCTGGATCTCCTGGACCGTTACCAACCCTATTGCTCCCGATGTCTCCATGGCCATGCCAGGCATCATGTCACCAGT TCTGCCGCTATTGTCCCCTC
Downstream 100 bases:
>100_bases CGCAACGCCTGCTCGAGGTCGCCGATCAGATCGCCGACCTCCTCGATGCCCACCGACAACCGCACCAGATCGTCCGGCAC CTCCAGCAGCGATCCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPQIAEDLLLLLLNNASGRPLLDKNRRSQALAAAIVLDLALAQRIRPATHGEPTKAGHLLVLQAPDIGDPVLDRAIHRLR RRPMDPTEAIAKVGRGVESQMLHRLEITGDIHTVRMGGRLFPDKYWPVTNNERANAVRQGVTDVLFHYAPPSPSTAAIIA VLHGVNGFDAILSLDPIGKQQVSRWSQTIADGGWAAQTRDNRGPAVNLAVTAAVISAALHSMS
Sequences:
>Translated_223_residues MPQIAEDLLLLLLNNASGRPLLDKNRRSQALAAAIVLDLALAQRIRPATHGEPTKAGHLLVLQAPDIGDPVLDRAIHRLR RRPMDPTEAIAKVGRGVESQMLHRLEITGDIHTVRMGGRLFPDKYWPVTNNERANAVRQGVTDVLFHYAPPSPSTAAIIA VLHGVNGFDAILSLDPIGKQQVSRWSQTIADGGWAAQTRDNRGPAVNLAVTAAVISAALHSMS >Mature_222_residues PQIAEDLLLLLLNNASGRPLLDKNRRSQALAAAIVLDLALAQRIRPATHGEPTKAGHLLVLQAPDIGDPVLDRAIHRLRR RPMDPTEAIAKVGRGVESQMLHRLEITGDIHTVRMGGRLFPDKYWPVTNNERANAVRQGVTDVLFHYAPPSPSTAAIIAV LHGVNGFDAILSLDPIGKQQVSRWSQTIADGGWAAQTRDNRGPAVNLAVTAAVISAALHSMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24085; Mature: 23954
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQIAEDLLLLLLNNASGRPLLDKNRRSQALAAAIVLDLALAQRIRPATHGEPTKAGHLL CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE VLQAPDIGDPVLDRAIHRLRRRPMDPTEAIAKVGRGVESQMLHRLEITGDIHTVRMGGRL EEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCEE FPDKYWPVTNNERANAVRQGVTDVLFHYAPPSPSTAAIIAVLHGVNGFDAILSLDPIGKQ CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHEECCCCCHH QVSRWSQTIADGGWAAQTRDNRGPAVNLAVTAAVISAALHSMS HHHHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQIAEDLLLLLLNNASGRPLLDKNRRSQALAAAIVLDLALAQRIRPATHGEPTKAGHLL CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE VLQAPDIGDPVLDRAIHRLRRRPMDPTEAIAKVGRGVESQMLHRLEITGDIHTVRMGGRL EEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCEE FPDKYWPVTNNERANAVRQGVTDVLFHYAPPSPSTAAIIAVLHGVNGFDAILSLDPIGKQ CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHEECCCCCHH QVSRWSQTIADGGWAAQTRDNRGPAVNLAVTAAVISAALHSMS HHHHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA