| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628277
Identifier: 169628277
GI number: 169628277
Start: 1197734
End: 1198231
Strand: Reverse
Name: 169628277
Synonym: MAB_1184c
Alternate gene names: NA
Gene position: 1198231-1197734 (Counterclockwise)
Preceding gene: 169628278
Following gene: 169628274
Centisome position: 23.65
GC content: 67.47
Gene sequence:
>498_bases ATGACCCTGCCGTTCGATCCCGTCGACGATGCCCATCGCCATTGGGTGGAAAACGGCTGGGGCGAGGTCGCCGACGGGAT GGCCGCCGTCACGTCGGTGATGCGCGCCCACCAGATCATGCTGGCGCGGGTCGAGGACGTCTTACGCCCGCATGGTCTGA CCTTTTCGCGCTACGAACTGCTGATGCTGCTGTCCTTCAGCCGCGCGGGCTCCATGCCGATGGCCAAGGCCAGCGCGCGC CTGCAGGTTCACCCCACCTCGGTGACCAATACGGTGGACCGGCTGGAGGAGGCGGGGTTGGTGCGCCGCGTGCCCAATCC CGCCGACGGCCGCGGCACGCTAGTCGAGATCACCGATGCCGGACGAGATCTCGGTTCGGTGGCCACTGCCGACTTGAACG CCAAGGTGTTCGCGCAGATCGGGCTGTCGCCCTCACGCACCCGCACGCTGGTGTCGGTGTTGACGCATCTGCGCCGTGAC GCGGGGGACTTCAGCTAG
Upstream 100 bases:
>100_bases CGCAGGATCTTCCACTCGGCATTCGGTACCGCCGACCAGTCCGAGGGCATGGCCGCGTTCGTCGAGAAGCGCCCCGCCAA CTTCATTCACCGCTGAGCGC
Downstream 100 bases:
>100_bases AGCCAGGCGTCCCACCCCACACCGTTGGTGCCCACCTCTATGCGACAACCGCGGTGTAGGCCAGCTCGGCCGGATCGTTG TCGCATAGACGCGGGCAGTG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; MarR-Transcriptional Regulator; Regulator Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcriptional Regulatory Protein; Marr Family Transcriptional Regulator
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTLPFDPVDDAHRHWVENGWGEVADGMAAVTSVMRAHQIMLARVEDVLRPHGLTFSRYELLMLLSFSRAGSMPMAKASAR LQVHPTSVTNTVDRLEEAGLVRRVPNPADGRGTLVEITDAGRDLGSVATADLNAKVFAQIGLSPSRTRTLVSVLTHLRRD AGDFS
Sequences:
>Translated_165_residues MTLPFDPVDDAHRHWVENGWGEVADGMAAVTSVMRAHQIMLARVEDVLRPHGLTFSRYELLMLLSFSRAGSMPMAKASAR LQVHPTSVTNTVDRLEEAGLVRRVPNPADGRGTLVEITDAGRDLGSVATADLNAKVFAQIGLSPSRTRTLVSVLTHLRRD AGDFS >Mature_164_residues TLPFDPVDDAHRHWVENGWGEVADGMAAVTSVMRAHQIMLARVEDVLRPHGLTFSRYELLMLLSFSRAGSMPMAKASARL QVHPTSVTNTVDRLEEAGLVRRVPNPADGRGTLVEITDAGRDLGSVATADLNAKVFAQIGLSPSRTRTLVSVLTHLRRDA GDFS
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17973; Mature: 17842
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPFDPVDDAHRHWVENGWGEVADGMAAVTSVMRAHQIMLARVEDVLRPHGLTFSRYEL CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LMLLSFSRAGSMPMAKASARLQVHPTSVTNTVDRLEEAGLVRRVPNPADGRGTLVEITDA HHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEECC GRDLGSVATADLNAKVFAQIGLSPSRTRTLVSVLTHLRRDAGDFS CCCHHHHHHCCCCHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLPFDPVDDAHRHWVENGWGEVADGMAAVTSVMRAHQIMLARVEDVLRPHGLTFSRYEL CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LMLLSFSRAGSMPMAKASARLQVHPTSVTNTVDRLEEAGLVRRVPNPADGRGTLVEITDA HHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEECC GRDLGSVATADLNAKVFAQIGLSPSRTRTLVSVLTHLRRDAGDFS CCCHHHHHHCCCCHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA