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The map label for this gene is lpqV [H]

Identifier: 169628274

GI number: 169628274

Start: 1196010

End: 1196492

Strand: Reverse

Name: lpqV [H]

Synonym: MAB_1181c

Alternate gene names: 169628274

Gene position: 1196492-1196010 (Counterclockwise)

Preceding gene: 169628277

Following gene: 169628273

Centisome position: 23.61

GC content: 67.49

Gene sequence:

>483_bases
ATGTCGTGGCTGGTAGGCACTTGCTACTTTGGAGTGGTGACCGCCCCAACTCGCATCGCTGCGACTCTGATGGCCTGCTG
CGTCCCACTGATCGGCGCTGCGTGCTCGTCCGCATCGGACGATAAGGCGGCTCCCAGCCCCTCCGTCACCGCAGGCACCA
CCACGACGTCGCTGGGGGCTCCCGCAGCCCAGCCGCCGGCCGCCGGCTCAGGAGTGTCCCCAGCGGGCGTCACAACGTCC
GTGAACGCCGCCCCCTCATCCTTGGAGGAGGAGTACTACCAGGCGTGCCGGGCGGCTGCCGACTGGATGACCGGCAAGCA
CGATGGGCCCGACCAGCTGGTGGAGGGGTACCTACAGTCCATACAGAGCACCGGGAACATCGGCCCCGGCACCTTCCACA
AGTCCTGGCATGAGCTGACGGCAGATCGGCAGGCCGCGGTCATCGTGGCGACCAATGCCGCTGCCGAACAGCAGTGCGGG
TAA

Upstream 100 bases:

>100_bases
GCGACAACACCCCTGAAAACCCCTGTGTCCCATCACAGCTGAAATGGTACCGGCGTTTTCCAGCGGTTTTGGCCCCCGGG
CAAAAGCTCTAGGTGAGTAA

Downstream 100 bases:

>100_bases
CCCGCTCCTCAGCGGGTAGACACGAACACACCAGTAGGGGCGCGGTCGCCGGCAATCGCTGGAAGCCTTTCTCATTCAAT
TCAATTCGGGCAAATCGATG

Product: putative lipoprotein LpqV precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSWLVGTCYFGVVTAPTRIAATLMACCVPLIGAACSSASDDKAAPSPSVTAGTTTTSLGAPAAQPPAAGSGVSPAGVTTS
VNAAPSSLEEEYYQACRAAADWMTGKHDGPDQLVEGYLQSIQSTGNIGPGTFHKSWHELTADRQAAVIVATNAAAEQQCG

Sequences:

>Translated_160_residues
MSWLVGTCYFGVVTAPTRIAATLMACCVPLIGAACSSASDDKAAPSPSVTAGTTTTSLGAPAAQPPAAGSGVSPAGVTTS
VNAAPSSLEEEYYQACRAAADWMTGKHDGPDQLVEGYLQSIQSTGNIGPGTFHKSWHELTADRQAAVIVATNAAAEQQCG
>Mature_159_residues
SWLVGTCYFGVVTAPTRIAATLMACCVPLIGAACSSASDDKAAPSPSVTAGTTTTSLGAPAAQPPAAGSGVSPAGVTTSV
NAAPSSLEEEYYQACRAAADWMTGKHDGPDQLVEGYLQSIQSTGNIGPGTFHKSWHELTADRQAAVIVATNAAAEQQCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020377
- ProDom:   PD076648 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16104; Mature: 15973

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLVGTCYFGVVTAPTRIAATLMACCVPLIGAACSSASDDKAAPSPSVTAGTTTTSLGA
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PAAQPPAAGSGVSPAGVTTSVNAAPSSLEEEYYQACRAAADWMTGKHDGPDQLVEGYLQS
CCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IQSTGNIGPGTFHKSWHELTADRQAAVIVATNAAAEQQCG
HHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHCCCC
>Mature Secondary Structure 
SWLVGTCYFGVVTAPTRIAATLMACCVPLIGAACSSASDDKAAPSPSVTAGTTTTSLGA
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PAAQPPAAGSGVSPAGVTTSVNAAPSSLEEEYYQACRAAADWMTGKHDGPDQLVEGYLQS
CCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IQSTGNIGPGTFHKSWHELTADRQAAVIVATNAAAEQQCG
HHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]