| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628163
Identifier: 169628163
GI number: 169628163
Start: 1079920
End: 1080522
Strand: Reverse
Name: 169628163
Synonym: MAB_1068c
Alternate gene names: NA
Gene position: 1080522-1079920 (Counterclockwise)
Preceding gene: 169628164
Following gene: 169628154
Centisome position: 21.32
GC content: 64.84
Gene sequence:
>603_bases ATGAGCAACCTCCCTGAGCGGGTGACCGCATCGATGCGGGCCGCAGACGTCGATCGCATGCGTGTCGCGCAGCTGTTATC CGACGCTGCCGCGCAGGGCCGGCTGGAGCTCTCCGAGTTCGAGCAGCGCCTCGCCAAGGTGTACTCGGCAAATACCTACG GTGAGCTTGATCAGCTCAGCGCGGACCTCCCCGACGTCGCCACCTCCCCGGTCCGGGGTCAAGGCAGCAAGCCAGCGCCA TCGACGGTGCTGATGGCCATCATGAGCGGGTTCGAACGACGCGGCCGCTGGAATGTTCCCGGCAAGCTCACCTCATTCGC GCTGTGGGGTGGCGGCGTGCTGGATCTGCGCTACGCCGACTTCACCTCCAACGAGGTTGAGATCAGGTCCTTCTCCATCA TGGGCGGACAGACGATTCTCTTGCCACCCGAGGTCAACGTGGACGTCAAGGGCGTGGCCGTCATGGGTGGCTTCGATCAC TCGGCGAGCGGCAATGGTGTACAAGGCGCCCCCCACGTGACAGTGAAGGGGTTCTCGCTGTGGGGTGGCGTCAACGTCAA GCGGAAGCGGCGCAAGCGGCGCGAGTCGTTGGAAGAGCGCTAG
Upstream 100 bases:
>100_bases CCTGGCAAGTGTGAACCACGCGCCACTACGTATGTAGTGCGCTGAGCAACACTATTGAACCGCGTGCCTTTAAGCGCCGT TCGTCGTAGGCTCGGCGGTG
Downstream 100 bases:
>100_bases ACGGGGCTCGACCCAAGGACAGGGCGCCCAACCGCCACAGCGCATTCACCACGTGGCGGCGCCGGTCCTCATCGTCCAGT TGCGGCGCCAGGACGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSNLPERVTASMRAADVDRMRVAQLLSDAAAQGRLELSEFEQRLAKVYSANTYGELDQLSADLPDVATSPVRGQGSKPAP STVLMAIMSGFERRGRWNVPGKLTSFALWGGGVLDLRYADFTSNEVEIRSFSIMGGQTILLPPEVNVDVKGVAVMGGFDH SASGNGVQGAPHVTVKGFSLWGGVNVKRKRRKRRESLEER
Sequences:
>Translated_200_residues MSNLPERVTASMRAADVDRMRVAQLLSDAAAQGRLELSEFEQRLAKVYSANTYGELDQLSADLPDVATSPVRGQGSKPAP STVLMAIMSGFERRGRWNVPGKLTSFALWGGGVLDLRYADFTSNEVEIRSFSIMGGQTILLPPEVNVDVKGVAVMGGFDH SASGNGVQGAPHVTVKGFSLWGGVNVKRKRRKRRESLEER >Mature_199_residues SNLPERVTASMRAADVDRMRVAQLLSDAAAQGRLELSEFEQRLAKVYSANTYGELDQLSADLPDVATSPVRGQGSKPAPS TVLMAIMSGFERRGRWNVPGKLTSFALWGGGVLDLRYADFTSNEVEIRSFSIMGGQTILLPPEVNVDVKGVAVMGGFDHS ASGNGVQGAPHVTVKGFSLWGGVNVKRKRRKRRESLEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012551 [H]
Pfam domain/function: PF08044 DUF1707 [H]
EC number: NA
Molecular weight: Translated: 21722; Mature: 21591
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLPERVTASMRAADVDRMRVAQLLSDAAAQGRLELSEFEQRLAKVYSANTYGELDQLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHC ADLPDVATSPVRGQGSKPAPSTVLMAIMSGFERRGRWNVPGKLTSFALWGGGVLDLRYAD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECC FTSNEVEIRSFSIMGGQTILLPPEVNVDVKGVAVMGGFDHSASGNGVQGAPHVTVKGFSL CCCCCEEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEE WGGVNVKRKRRKRRESLEER ECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SNLPERVTASMRAADVDRMRVAQLLSDAAAQGRLELSEFEQRLAKVYSANTYGELDQLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHC ADLPDVATSPVRGQGSKPAPSTVLMAIMSGFERRGRWNVPGKLTSFALWGGGVLDLRYAD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECC FTSNEVEIRSFSIMGGQTILLPPEVNVDVKGVAVMGGFDHSASGNGVQGAPHVTVKGFSL CCCCCEEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEE WGGVNVKRKRRKRRESLEER ECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]