| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628161
Identifier: 169628161
GI number: 169628161
Start: 1077818
End: 1078405
Strand: Direct
Name: 169628161
Synonym: MAB_1066
Alternate gene names: NA
Gene position: 1077818-1078405 (Clockwise)
Preceding gene: 169628160
Following gene: 169628162
Centisome position: 21.27
GC content: 62.24
Gene sequence:
>588_bases ATGACCGAACCACACCTAGCGCAGCCCGTCCTTACAACGCCGGAAAAACCGACGTGGTGGAAGAACAGAAAATTCTGGAC CGTCGTGGGCGTCATCCTGGCGATTGCACTTGCCGCGGGCCGATTTGTCTTGCGTGAGCACAGGGCCGAGGAACGTAGCC GCCATTCGGCGGAGAAGGAGCTGGACAGCTTCGCGGTCGGTGACTGCGTGACGATGAGCCAGAGCAAGAGCGGCACCGAC CTGACCAAGACTGGCTGCGAGGTGGACCCGAGCTACACGGTCGGCCTGCATATCGACGCGAGCGCCGAATGCTCCGACGG GAAGTACACCCAGTACAGCATCACCATCAAGGATGCGGCGGTGGGGAAGCTCTGCCTGGCGAAGAATCTTGTTGTGGGGC ACTGCTATCAACAGGGCGGGCCCGGGGGCAGCACCCAATTGGTCGACTGCGCGAAGGCCGGAGAGAACGCATATCGGGTG GTGCAGCGGTTCGAACTGGACGACGAGAAGCGTTGTCCGGAGGATACGACGCCCTCGCGCTACTCGGCTCCACCGCGGAC CTACTGCCTGGCTTTACCGACCGGATAA
Upstream 100 bases:
>100_bases GCTGGGGAAGATGTCGAATAGCCGGACGCGGTCCATTGCGCTGCGAGGTTCGCTACGTCCGATCAATGCGGATAGCCGGA GTTCAGACTGAGAGGCCGAA
Downstream 100 bases:
>100_bases CTCCGACACGTCGCCCGGGTGGAAGAAGCCGGGAACTTTTGGTCACCGGCGTACGACTGATGTAGTGACGGTGCCCGCGG GCTGGGTGCGCGTCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTEPHLAQPVLTTPEKPTWWKNRKFWTVVGVILAIALAAGRFVLREHRAEERSRHSAEKELDSFAVGDCVTMSQSKSGTD LTKTGCEVDPSYTVGLHIDASAECSDGKYTQYSITIKDAAVGKLCLAKNLVVGHCYQQGGPGGSTQLVDCAKAGENAYRV VQRFELDDEKRCPEDTTPSRYSAPPRTYCLALPTG
Sequences:
>Translated_195_residues MTEPHLAQPVLTTPEKPTWWKNRKFWTVVGVILAIALAAGRFVLREHRAEERSRHSAEKELDSFAVGDCVTMSQSKSGTD LTKTGCEVDPSYTVGLHIDASAECSDGKYTQYSITIKDAAVGKLCLAKNLVVGHCYQQGGPGGSTQLVDCAKAGENAYRV VQRFELDDEKRCPEDTTPSRYSAPPRTYCLALPTG >Mature_194_residues TEPHLAQPVLTTPEKPTWWKNRKFWTVVGVILAIALAAGRFVLREHRAEERSRHSAEKELDSFAVGDCVTMSQSKSGTDL TKTGCEVDPSYTVGLHIDASAECSDGKYTQYSITIKDAAVGKLCLAKNLVVGHCYQQGGPGGSTQLVDCAKAGENAYRVV QRFELDDEKRCPEDTTPSRYSAPPRTYCLALPTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21325; Mature: 21194
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPHLAQPVLTTPEKPTWWKNRKFWTVVGVILAIALAAGRFVLREHRAEERSRHSAEKE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSFAVGDCVTMSQSKSGTDLTKTGCEVDPSYTVGLHIDASAECSDGKYTQYSITIKDAA HHHHHCCCEEEECCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCH VGKLCLAKNLVVGHCYQQGGPGGSTQLVDCAKAGENAYRVVQRFELDDEKRCPEDTTPSR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHCCCCCCCCCC YSAPPRTYCLALPTG CCCCCCEEEEEECCC >Mature Secondary Structure TEPHLAQPVLTTPEKPTWWKNRKFWTVVGVILAIALAAGRFVLREHRAEERSRHSAEKE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSFAVGDCVTMSQSKSGTDLTKTGCEVDPSYTVGLHIDASAECSDGKYTQYSITIKDAA HHHHHCCCEEEECCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCH VGKLCLAKNLVVGHCYQQGGPGGSTQLVDCAKAGENAYRVVQRFELDDEKRCPEDTTPSR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHCCCCCCCCCC YSAPPRTYCLALPTG CCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA