| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628162
Identifier: 169628162
GI number: 169628162
Start: 1078716
End: 1079966
Strand: Direct
Name: 169628162
Synonym: MAB_1067
Alternate gene names: NA
Gene position: 1078716-1079966 (Clockwise)
Preceding gene: 169628161
Following gene: 169628170
Centisome position: 21.29
GC content: 64.99
Gene sequence:
>1251_bases GTGTTCGTCCAGGATCCACGTTGGCGTCAATTCGTCGCCGATCATGCTCCGCGCTATGAAGAGACGGTCTTTCTTCCCGC ATTGGTCCCGTCGCCCTCGGCGTTCAGCGAACGGATCACGGCAGCGGTCACGTCTGCGACGTCGAGCGGCGCAAAAGGAT TGAGGCTGCGCGGATTCCGGGGCAGCGAGTTCGATTTCAAGCTCACCGAGCGACTCTCGCGTACGCCCCCGACGGACGGG CAGTCCCTGACCGAGTGGCTTTCCGGTGCGGCTGACGGTCGTCCGGCGTGTGTCGCCATCAACGACGTGTCATCGTGGGA TCTAGGCCTCGCCGCACTCGCGCAGTCGGTGGTGCGTAGCCTGGTCCCCGGTCGGGATCTGGTTTCCGGTGCGGATATCT ATACCTTTATCGCCGATGTGGAGTGGACGCCCTTCGGCATCCACAAGGATGACGAGCCGTCGTTGATCTTCCACCTAGGC CCGGGTCTCAAGGAGCTCTGGGTATGGCCGTCGGGCGGCATTGGCCAAGATCAACTGTTCGAAAACCCGTCGCTGGGCCG GGTGTCGTTCGACTTCGAACGGCTGCTGCCCGGGGCGAGCCGCTACACGCTGCGCCCTGGTGACTTCGTGTGCATTCCCC AGGGGCGCTATCACCTGTTTCGCAACGTGGGTCCGTCGATGTTCCTGGGAGTCACGCTCTTTCCGCCCGACATCCGGAAA TCCTTCTCGGACTTGATGGTCGGCCACTTCGGCGCGCGGCTTGAGGAAGCGGGTGAGCCGTGCAGCTTCGCTGATGTCAG CCGGACGGTCATGGACGTGCTCCGCGATCCCGAGGCTCTCGCCGGATTGGCCACGACCATGGAATTGGCCGCGGCCAAGC AGCGCACCGCCGGATATCTGCGCGCGCCGAAGGCTGCCGCCCTGAGAATCGGTGCCCCGCCTGCCGATGCCACGCTCGCC TGGGCCTACACGGGAGTGGTGGAGTGTGTTGCCGGCGCGGACCGCACTCATCTGGTGGCCCGGGGCCGGGAGATCGTCTT CGGTGGCGCTGTGAATCTTGACGAACTTCTAGCGCTCGACGGTGAGTTCACCTTGCGCGATCTTGATGCCGTCCTGGCGC CGCAACTGGACGATGAGGACCGGCGCCGCCACGTGGTGAATGCGCTGTGGCGGTTGGGCGCCCTGTCCTTGGGTCGAGCC CCGTCTAGCGCTCTTCCAACGACTCGCGCCGCTTGCGCCGCTTCCGCTTGA
Upstream 100 bases:
>100_bases CCGCGACGGAAATGGTTGCCAGCCACTAAGAGTGGTTGCCGGGGGCGGGCGGTTATCCCATTGGCCGTCCGCCCCCGGAA GCACGCATGGAGACGAAATA
Downstream 100 bases:
>100_bases CGTTGACGCCACCCCACAGCGAGAACCCCTTCACTGTCACGTGGGGGGCGCCTTGTACACCATTGCCGCTCGCCGAGTGA TCGAAGCCACCCATGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MFVQDPRWRQFVADHAPRYEETVFLPALVPSPSAFSERITAAVTSATSSGAKGLRLRGFRGSEFDFKLTERLSRTPPTDG QSLTEWLSGAADGRPACVAINDVSSWDLGLAALAQSVVRSLVPGRDLVSGADIYTFIADVEWTPFGIHKDDEPSLIFHLG PGLKELWVWPSGGIGQDQLFENPSLGRVSFDFERLLPGASRYTLRPGDFVCIPQGRYHLFRNVGPSMFLGVTLFPPDIRK SFSDLMVGHFGARLEEAGEPCSFADVSRTVMDVLRDPEALAGLATTMELAAAKQRTAGYLRAPKAAALRIGAPPADATLA WAYTGVVECVAGADRTHLVARGREIVFGGAVNLDELLALDGEFTLRDLDAVLAPQLDDEDRRRHVVNALWRLGALSLGRA PSSALPTTRAACAASA
Sequences:
>Translated_416_residues MFVQDPRWRQFVADHAPRYEETVFLPALVPSPSAFSERITAAVTSATSSGAKGLRLRGFRGSEFDFKLTERLSRTPPTDG QSLTEWLSGAADGRPACVAINDVSSWDLGLAALAQSVVRSLVPGRDLVSGADIYTFIADVEWTPFGIHKDDEPSLIFHLG PGLKELWVWPSGGIGQDQLFENPSLGRVSFDFERLLPGASRYTLRPGDFVCIPQGRYHLFRNVGPSMFLGVTLFPPDIRK SFSDLMVGHFGARLEEAGEPCSFADVSRTVMDVLRDPEALAGLATTMELAAAKQRTAGYLRAPKAAALRIGAPPADATLA WAYTGVVECVAGADRTHLVARGREIVFGGAVNLDELLALDGEFTLRDLDAVLAPQLDDEDRRRHVVNALWRLGALSLGRA PSSALPTTRAACAASA >Mature_416_residues MFVQDPRWRQFVADHAPRYEETVFLPALVPSPSAFSERITAAVTSATSSGAKGLRLRGFRGSEFDFKLTERLSRTPPTDG QSLTEWLSGAADGRPACVAINDVSSWDLGLAALAQSVVRSLVPGRDLVSGADIYTFIADVEWTPFGIHKDDEPSLIFHLG PGLKELWVWPSGGIGQDQLFENPSLGRVSFDFERLLPGASRYTLRPGDFVCIPQGRYHLFRNVGPSMFLGVTLFPPDIRK SFSDLMVGHFGARLEEAGEPCSFADVSRTVMDVLRDPEALAGLATTMELAAAKQRTAGYLRAPKAAALRIGAPPADATLA WAYTGVVECVAGADRTHLVARGREIVFGGAVNLDELLALDGEFTLRDLDAVLAPQLDDEDRRRHVVNALWRLGALSLGRA PSSALPTTRAACAASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44933; Mature: 44933
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVQDPRWRQFVADHAPRYEETVFLPALVPSPSAFSERITAAVTSATSSGAKGLRLRGFR CCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEECCC GSEFDFKLTERLSRTPPTDGQSLTEWLSGAADGRPACVAINDVSSWDLGLAALAQSVVRS CCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH LVPGRDLVSGADIYTFIADVEWTPFGIHKDDEPSLIFHLGPGLKELWVWPSGGIGQDQLF HCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHEEECCCCCCCHHHHC ENPSLGRVSFDFERLLPGASRYTLRPGDFVCIPQGRYHLFRNVGPSMFLGVTLFPPDIRK CCCCCCEEEECHHHHCCCCCEEEECCCCEEEECCCHHHHHHCCCCCCEEEEEECCHHHHH SFSDLMVGHFGARLEEAGEPCSFADVSRTVMDVLRDPEALAGLATTMELAAAKQRTAGYL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RAPKAAALRIGAPPADATLAWAYTGVVECVAGADRTHLVARGREIVFGGAVNLDELLALD CCCCHHEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCHHHHHHCC GEFTLRDLDAVLAPQLDDEDRRRHVVNALWRLGALSLGRAPSSALPTTRAACAASA CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MFVQDPRWRQFVADHAPRYEETVFLPALVPSPSAFSERITAAVTSATSSGAKGLRLRGFR CCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEECCC GSEFDFKLTERLSRTPPTDGQSLTEWLSGAADGRPACVAINDVSSWDLGLAALAQSVVRS CCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH LVPGRDLVSGADIYTFIADVEWTPFGIHKDDEPSLIFHLGPGLKELWVWPSGGIGQDQLF HCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHEEECCCCCCCHHHHC ENPSLGRVSFDFERLLPGASRYTLRPGDFVCIPQGRYHLFRNVGPSMFLGVTLFPPDIRK CCCCCCEEEECHHHHCCCCCEEEECCCCEEEECCCHHHHHHCCCCCCEEEEEECCHHHHH SFSDLMVGHFGARLEEAGEPCSFADVSRTVMDVLRDPEALAGLATTMELAAAKQRTAGYL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RAPKAAALRIGAPPADATLAWAYTGVVECVAGADRTHLVARGREIVFGGAVNLDELLALD CCCCHHEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCHHHHHHCC GEFTLRDLDAVLAPQLDDEDRRRHVVNALWRLGALSLGRAPSSALPTTRAACAASA CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA