| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is mmpL4 [H]
Identifier: 169628084
GI number: 169628084
Start: 994399
End: 997269
Strand: Reverse
Name: mmpL4 [H]
Synonym: MAB_0987c
Alternate gene names: 169628084
Gene position: 997269-994399 (Counterclockwise)
Preceding gene: 169628085
Following gene: 169628081
Centisome position: 19.68
GC content: 62.1
Gene sequence:
>2871_bases ATGAGCGCCAATCACGCCCACGAGTCACGTGCGGCGAAGATCGTCCGTCGGCTTGCCGTCCCCATCGTCTTGTTCTGGGT AGCGATTGCCGCGGTGACCAACGCGACCGTCCCCCAACTGGAAGTGGTCGGCGAGGAACGATCTGCCCCGCTGAACGCGG CCGACGCACCGTCGACACTGGCGATGAGGCATATCGGCAAGGTGTTCAACGAATTCGACTCCGACAGCTCGGCGATGGTG GTACTTGAAGGCGAGAAACCCCTTGGCGCGCAGGCACATCAATTCTACAACACGTTGGTGCAGCGCCTGAATGACGACCA CGAACACGTCCAGCATGTTGCCGATTACTGGGGCGATCCGATCACGGCAGGGGGCTCGCAGAGCAAGGACGGTAAGGCCG CCTACGTGCAGGTCTATGTCGCCGGGAATCAAGGCGAGGCGTTGTCCAACGAGTCCGTCGACGCCGTGCGCCGCATCATC GCGGAAACACCCGCGCCCGATGGGATCAAGGCCTATGTATCCGGTGAGGCTCCGACCATCACCGATCAATTCGAGGTCGG CAATGCGGGCGCGGCCCAAGTCACCATCATCACCTTCGCGGTCATCGCGGTCATGCTGCTGGTGGTGTACCGCTCGCTCA TCACCACCGCGTTGGTGCTGGCCATGGTCATGGTCGAGCTCTCCGCTGCGCGGGGAATCGTTGCAGCACTAGGACATACG GGTGTCATAGGGCTATCCACCTATGCGACCAACCTCTTGACGATGCTCGCCATCGCCGCCGGCACCGACTATGCGATATT TTTCGTCGGCCGCTATCAGGAAGCACGCTCGGCAGGCGAAGATCGCCCGTCCGCCTATCAGACGATGTATAAGTCGACCG CTCACGTGATTATCGGCTCAGGCTTGACCGTCGCGGGAGCGTTGTTCTGTCTGTCGTTCACACGCTTGCCCTACTTCCAA ACCCTGGGCGTCCCGGCTGCTCTGGGAGTGCTGGTGACGCTCGCCGCCGCCCTTACCCTGGCGCCCGCCGTGCTGGTGAT CGCAGGGCGCTTCGGCTTGATGGAACCCAAGCGGGCCATGCGCACCCGCGGCTGGCGCCGGATCGGTACGGCGATCGTGC GCTGGCCCGGACCGATTCTCGTGGTGTCGTGCATCGCCACCCTCGTTGGCCTACTCGCGCTACCGGGATACCGGACCACC TACGACGGCCGCATCTACATGCCGAGCTCGGTCCCGTCGAACGTCGGCTATGCCGCCGCCGAACGCCATTTCTCCGTCGC GCGCCTCAACCCCGAACTTCTGATGATCGAAACCGACTTCGATATGCGCAATCCGGCCGGCATGGTGCTGCTGGAACGCG TCGCCAAATCCGTTCTCCATGCCCGCGGTGTGGCCCTGGTCCAATCGATCACCCGCCCCCTCGGCACACCAATCACCCAC TCGTCCATCCCGTTTCAGATCAGCGCATCGAGCGCCAGCCAGTTGATGAATCTTTCCCAGCAGCAGAATCAGGCGCTGTA CCTTTCACAACAGGCTGACCAGATGACGAACACCATCGCTGTGCTGAGACAGCAACTGGCGCTGCAGAAACAAAGTGCCG CCATCACACATGAACAGACCGAGGGGTTCCAACAGACCGTCGCGGTGGCACAGGATCTGCGGGACAAGATCGCCAACTTC GACGATCAGTTCCGGCCCATCCGAAACTATTTCTACTGGGAGCCGCACTGCTTCGACATCCCCTTCTGCGCGGCATTGCG ATCCGTTTTCGATGCCCTCGACGGTATCGATGAGCTGGTCGACGCACTGCAATCGGTCACCGGGAGCCTCACCAAGCTCG ACGCCCTGCAACCCAAACTTGTGGACCTGATCCCCCCGCAGATCGCCATCCAGGAAAAGAACCGCGACCTGACCCTGTCG AACTATGCGATCAACAACGGCACCAACACCCAGAACGAGGAGTCCACGCGCACCGCAACAGAATTGGGCAAGGCCTTCGA TGACGCGAAGAACGACGACTCCTTCTACCTGCCGCCGGAAGCATTCGACAACCCCGCATTCAAACGCGGCATGAAGTTGT TCATGTCCCCCGACGGCAAGGCCGCGCGGATGATCATCACTCACCAGGGGGATCCGCAGACCTCCGAGGGCATCGCGCAC ATCGACGCGATCAAGGAAGCGGCCTTTGACGCCGTCAAGGCCACCCCACTGGCCGACGCCAAGATCTATGTCGCCGGGAC TGCCTCGGCGTACAAGGACATTGCCGACGGCCAGAAGTACGACCTCTTGATGGCCGCGCTGGCCTCGCTGGGCCTCATCC TGCTCATCATGATGTTCCTGACCCGCAGTCTGGTCGCCGCCCTGGTGATCGTGGGCACGGTGGCGCTGTCGCTGGCGGCA TCGTTCGGCATGTCAGTGGTGGTGTGGCAGTACATTTTCGGGATTCCGTTGTACTGGGTCATCTTCCCGCTGGCGGTCAT CATCTTGTTGGCAGTCGGCGCCGACTACAACCTGCTGCTGATATCCCGATTCAAGGAGGAAACCGGCGCGGGATTGAAGA CGGGCATCATCCGCGCCATCGCCGGCACCGGTGGCGTGGTGACCGCCGCCGGTCTGGTCTTCGCGGTGACCATGTCGTCC TTCGTCTTCAGCGATCTACGTGTTCTCGGTCAGATCGGTACCACCATCGGCCTCGGGTTGCTCTTCGACACCCTGGTGGT GCGTTCGTTCCTCACACCGGCCATCGCCACCATGCTCGGCCGCTGGTTCTGGTGGCCTATCAACATACGTACGCGCCCGG CCCCGAAACCTTTTGGGCCAAAACCCACCGGCGCCGACGACACCACCGGGCCGATCCCGGTGAGCGGATAG
Upstream 100 bases:
>100_bases GTGATACCACCAGCTGCCGGATCACCGTGGACGGCATCGTCAAGGACGAAAGGACCGTCACCATCGTGAACGGCTACACC ACCTGCCTGGACAAGTCCGC
Downstream 100 bases:
>100_bases CTTTCAGCCGGGCTGGGTCCACGGCTCCGTCGGCAGCGGAGCGCCGGTCTCCAGGAACGACTTGAGGTTTGACAGCACTG CCGCCCATCCACCACTGGCC
Product: membrane protein MmpL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 956; Mature: 955
Protein sequence:
>956_residues MSANHAHESRAAKIVRRLAVPIVLFWVAIAAVTNATVPQLEVVGEERSAPLNAADAPSTLAMRHIGKVFNEFDSDSSAMV VLEGEKPLGAQAHQFYNTLVQRLNDDHEHVQHVADYWGDPITAGGSQSKDGKAAYVQVYVAGNQGEALSNESVDAVRRII AETPAPDGIKAYVSGEAPTITDQFEVGNAGAAQVTIITFAVIAVMLLVVYRSLITTALVLAMVMVELSAARGIVAALGHT GVIGLSTYATNLLTMLAIAAGTDYAIFFVGRYQEARSAGEDRPSAYQTMYKSTAHVIIGSGLTVAGALFCLSFTRLPYFQ TLGVPAALGVLVTLAAALTLAPAVLVIAGRFGLMEPKRAMRTRGWRRIGTAIVRWPGPILVVSCIATLVGLLALPGYRTT YDGRIYMPSSVPSNVGYAAAERHFSVARLNPELLMIETDFDMRNPAGMVLLERVAKSVLHARGVALVQSITRPLGTPITH SSIPFQISASSASQLMNLSQQQNQALYLSQQADQMTNTIAVLRQQLALQKQSAAITHEQTEGFQQTVAVAQDLRDKIANF DDQFRPIRNYFYWEPHCFDIPFCAALRSVFDALDGIDELVDALQSVTGSLTKLDALQPKLVDLIPPQIAIQEKNRDLTLS NYAINNGTNTQNEESTRTATELGKAFDDAKNDDSFYLPPEAFDNPAFKRGMKLFMSPDGKAARMIITHQGDPQTSEGIAH IDAIKEAAFDAVKATPLADAKIYVAGTASAYKDIADGQKYDLLMAALASLGLILLIMMFLTRSLVAALVIVGTVALSLAA SFGMSVVVWQYIFGIPLYWVIFPLAVIILLAVGADYNLLLISRFKEETGAGLKTGIIRAIAGTGGVVTAAGLVFAVTMSS FVFSDLRVLGQIGTTIGLGLLFDTLVVRSFLTPAIATMLGRWFWWPINIRTRPAPKPFGPKPTGADDTTGPIPVSG
Sequences:
>Translated_956_residues MSANHAHESRAAKIVRRLAVPIVLFWVAIAAVTNATVPQLEVVGEERSAPLNAADAPSTLAMRHIGKVFNEFDSDSSAMV VLEGEKPLGAQAHQFYNTLVQRLNDDHEHVQHVADYWGDPITAGGSQSKDGKAAYVQVYVAGNQGEALSNESVDAVRRII AETPAPDGIKAYVSGEAPTITDQFEVGNAGAAQVTIITFAVIAVMLLVVYRSLITTALVLAMVMVELSAARGIVAALGHT GVIGLSTYATNLLTMLAIAAGTDYAIFFVGRYQEARSAGEDRPSAYQTMYKSTAHVIIGSGLTVAGALFCLSFTRLPYFQ TLGVPAALGVLVTLAAALTLAPAVLVIAGRFGLMEPKRAMRTRGWRRIGTAIVRWPGPILVVSCIATLVGLLALPGYRTT YDGRIYMPSSVPSNVGYAAAERHFSVARLNPELLMIETDFDMRNPAGMVLLERVAKSVLHARGVALVQSITRPLGTPITH SSIPFQISASSASQLMNLSQQQNQALYLSQQADQMTNTIAVLRQQLALQKQSAAITHEQTEGFQQTVAVAQDLRDKIANF DDQFRPIRNYFYWEPHCFDIPFCAALRSVFDALDGIDELVDALQSVTGSLTKLDALQPKLVDLIPPQIAIQEKNRDLTLS NYAINNGTNTQNEESTRTATELGKAFDDAKNDDSFYLPPEAFDNPAFKRGMKLFMSPDGKAARMIITHQGDPQTSEGIAH IDAIKEAAFDAVKATPLADAKIYVAGTASAYKDIADGQKYDLLMAALASLGLILLIMMFLTRSLVAALVIVGTVALSLAA SFGMSVVVWQYIFGIPLYWVIFPLAVIILLAVGADYNLLLISRFKEETGAGLKTGIIRAIAGTGGVVTAAGLVFAVTMSS FVFSDLRVLGQIGTTIGLGLLFDTLVVRSFLTPAIATMLGRWFWWPINIRTRPAPKPFGPKPTGADDTTGPIPVSG >Mature_955_residues SANHAHESRAAKIVRRLAVPIVLFWVAIAAVTNATVPQLEVVGEERSAPLNAADAPSTLAMRHIGKVFNEFDSDSSAMVV LEGEKPLGAQAHQFYNTLVQRLNDDHEHVQHVADYWGDPITAGGSQSKDGKAAYVQVYVAGNQGEALSNESVDAVRRIIA ETPAPDGIKAYVSGEAPTITDQFEVGNAGAAQVTIITFAVIAVMLLVVYRSLITTALVLAMVMVELSAARGIVAALGHTG VIGLSTYATNLLTMLAIAAGTDYAIFFVGRYQEARSAGEDRPSAYQTMYKSTAHVIIGSGLTVAGALFCLSFTRLPYFQT LGVPAALGVLVTLAAALTLAPAVLVIAGRFGLMEPKRAMRTRGWRRIGTAIVRWPGPILVVSCIATLVGLLALPGYRTTY DGRIYMPSSVPSNVGYAAAERHFSVARLNPELLMIETDFDMRNPAGMVLLERVAKSVLHARGVALVQSITRPLGTPITHS SIPFQISASSASQLMNLSQQQNQALYLSQQADQMTNTIAVLRQQLALQKQSAAITHEQTEGFQQTVAVAQDLRDKIANFD DQFRPIRNYFYWEPHCFDIPFCAALRSVFDALDGIDELVDALQSVTGSLTKLDALQPKLVDLIPPQIAIQEKNRDLTLSN YAINNGTNTQNEESTRTATELGKAFDDAKNDDSFYLPPEAFDNPAFKRGMKLFMSPDGKAARMIITHQGDPQTSEGIAHI DAIKEAAFDAVKATPLADAKIYVAGTASAYKDIADGQKYDLLMAALASLGLILLIMMFLTRSLVAALVIVGTVALSLAAS FGMSVVVWQYIFGIPLYWVIFPLAVIILLAVGADYNLLLISRFKEETGAGLKTGIIRAIAGTGGVVTAAGLVFAVTMSSF VFSDLRVLGQIGTTIGLGLLFDTLVVRSFLTPAIATMLGRWFWWPINIRTRPAPKPFGPKPTGADDTTGPIPVSG
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 102692; Mature: 102560
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANHAHESRAAKIVRRLAVPIVLFWVAIAAVTNATVPQLEVVGEERSAPLNAADAPSTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCCCCCHHH AMRHIGKVFNEFDSDSSAMVVLEGEKPLGAQAHQFYNTLVQRLNDDHEHVQHVADYWGDP HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC ITAGGSQSKDGKAAYVQVYVAGNQGEALSNESVDAVRRIIAETPAPDGIKAYVSGEAPTI CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCC TDQFEVGNAGAAQVTIITFAVIAVMLLVVYRSLITTALVLAMVMVELSAARGIVAALGHT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVIGLSTYATNLLTMLAIAAGTDYAIFFVGRYQEARSAGEDRPSAYQTMYKSTAHVIIGS CEEEHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHCCCCCCCHHHHHHHHCCCCEEEEC GLTVAGALFCLSFTRLPYFQTLGVPAALGVLVTLAAALTLAPAVLVIAGRFGLMEPKRAM CHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RTRGWRRIGTAIVRWPGPILVVSCIATLVGLLALPGYRTTYDGRIYMPSSVPSNVGYAAA HHCCHHHHCCHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH ERHFSVARLNPELLMIETDFDMRNPAGMVLLERVAKSVLHARGVALVQSITRPLGTPITH HHCCHHEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SSIPFQISASSASQLMNLSQQQNQALYLSQQADQMTNTIAVLRQQLALQKQSAAITHEQT CCCCEEEECHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGFQQTVAVAQDLRDKIANFDDQFRPIRNYFYWEPHCFDIPFCAALRSVFDALDGIDELV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH DALQSVTGSLTKLDALQPKLVDLIPPQIAIQEKNRDLTLSNYAINNGTNTQNEESTRTAT HHHHHHHCCHHHHHHCCCHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHH ELGKAFDDAKNDDSFYLPPEAFDNPAFKRGMKLFMSPDGKAARMIITHQGDPQTSEGIAH HHHHHHCCCCCCCCEECCCHHCCCHHHHHCCEEEECCCCCEEEEEEEECCCCCCCCCHHH IDAIKEAAFDAVKATPLADAKIYVAGTASAYKDIADGQKYDLLMAALASLGLILLIMMFL HHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TRSLVAALVIVGTVALSLAASFGMSVVVWQYIFGIPLYWVIFPLAVIILLAVGADYNLLL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH ISRFKEETGAGLKTGIIRAIAGTGGVVTAAGLVFAVTMSSFVFSDLRVLGQIGTTIGLGL HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFDTLVVRSFLTPAIATMLGRWFWWPINIRTRPAPKPFGPKPTGADDTTGPIPVSG HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SANHAHESRAAKIVRRLAVPIVLFWVAIAAVTNATVPQLEVVGEERSAPLNAADAPSTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCCCCCHHH AMRHIGKVFNEFDSDSSAMVVLEGEKPLGAQAHQFYNTLVQRLNDDHEHVQHVADYWGDP HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC ITAGGSQSKDGKAAYVQVYVAGNQGEALSNESVDAVRRIIAETPAPDGIKAYVSGEAPTI CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCC TDQFEVGNAGAAQVTIITFAVIAVMLLVVYRSLITTALVLAMVMVELSAARGIVAALGHT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVIGLSTYATNLLTMLAIAAGTDYAIFFVGRYQEARSAGEDRPSAYQTMYKSTAHVIIGS CEEEHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHCCCCCCCHHHHHHHHCCCCEEEEC GLTVAGALFCLSFTRLPYFQTLGVPAALGVLVTLAAALTLAPAVLVIAGRFGLMEPKRAM CHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RTRGWRRIGTAIVRWPGPILVVSCIATLVGLLALPGYRTTYDGRIYMPSSVPSNVGYAAA HHCCHHHHCCHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH ERHFSVARLNPELLMIETDFDMRNPAGMVLLERVAKSVLHARGVALVQSITRPLGTPITH HHCCHHEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SSIPFQISASSASQLMNLSQQQNQALYLSQQADQMTNTIAVLRQQLALQKQSAAITHEQT CCCCEEEECHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGFQQTVAVAQDLRDKIANFDDQFRPIRNYFYWEPHCFDIPFCAALRSVFDALDGIDELV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH DALQSVTGSLTKLDALQPKLVDLIPPQIAIQEKNRDLTLSNYAINNGTNTQNEESTRTAT HHHHHHHCCHHHHHHCCCHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHH ELGKAFDDAKNDDSFYLPPEAFDNPAFKRGMKLFMSPDGKAARMIITHQGDPQTSEGIAH HHHHHHCCCCCCCCEECCCHHCCCHHHHHCCEEEECCCCCEEEEEEEECCCCCCCCCHHH IDAIKEAAFDAVKATPLADAKIYVAGTASAYKDIADGQKYDLLMAALASLGLILLIMMFL HHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TRSLVAALVIVGTVALSLAASFGMSVVVWQYIFGIPLYWVIFPLAVIILLAVGADYNLLL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH ISRFKEETGAGLKTGIIRAIAGTGGVVTAAGLVFAVTMSSFVFSDLRVLGQIGTTIGLGL HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFDTLVVRSFLTPAIATMLGRWFWWPINIRTRPAPKPFGPKPTGADDTTGPIPVSG HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]