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The map label for this gene is mmpS5 [H]

Identifier: 169628085

GI number: 169628085

Start: 997266

End: 997721

Strand: Reverse

Name: mmpS5 [H]

Synonym: MAB_0988c

Alternate gene names: 169628085

Gene position: 997721-997266 (Counterclockwise)

Preceding gene: 169628087

Following gene: 169628084

Centisome position: 19.69

GC content: 63.16

Gene sequence:

>456_bases
ATGTGGGCGCTGATGCAAGGCTGGTTCTGGAATCTCCTCAAGCGCTGGTGGACGCTCGTCGTTGCGGCGGCCGTGGTGGC
GGTGGTGGCGTTCGGAGTCAGCCGGCTACACGGCGTTTTCGGTTCAAACATCGAACTGTCACGCCCCGGCACCGAGGCCA
TGGAGAACACCAACTACAACCCCAAACGCGTTCTCCTCGAAGTCTTCGGCACCGCCGGGAGCACCGCAACCATCAACTTT
CTCGACGAAATGGCGCAACCGCACCGTGTCGACAACGCTCCCCTGCCGTGGGCGCACGAGCTGGTCACCAACGACCCCAC
CCTGTTCGCCGACCTGCGTGCCCAGGGCACCGGTGATACCACCAGCTGCCGGATCACCGTGGACGGCATCGTCAAGGACG
AAAGGACCGTCACCATCGTGAACGGCTACACCACCTGCCTGGACAAGTCCGCATGA

Upstream 100 bases:

>100_bases
GCCCCCGCGCCGCCTTAGTCAACCCCGTTGACACATCACTCGCCATGAGAGTACGGTACCGTACCGTTCCGCCAAAGTCG
GGCAGCCGACCATCGAGAGG

Downstream 100 bases:

>100_bases
GCGCCAATCACGCCCACGAGTCACGTGCGGCGAAGATCGTCCGTCGGCTTGCCGTCCCCATCGTCTTGTTCTGGGTAGCG
ATTGCCGCGGTGACCAACGC

Product: membrane protein MmpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MWALMQGWFWNLLKRWWTLVVAAAVVAVVAFGVSRLHGVFGSNIELSRPGTEAMENTNYNPKRVLLEVFGTAGSTATINF
LDEMAQPHRVDNAPLPWAHELVTNDPTLFADLRAQGTGDTTSCRITVDGIVKDERTVTIVNGYTTCLDKSA

Sequences:

>Translated_151_residues
MWALMQGWFWNLLKRWWTLVVAAAVVAVVAFGVSRLHGVFGSNIELSRPGTEAMENTNYNPKRVLLEVFGTAGSTATINF
LDEMAQPHRVDNAPLPWAHELVTNDPTLFADLRAQGTGDTTSCRITVDGIVKDERTVTIVNGYTTCLDKSA
>Mature_151_residues
MWALMQGWFWNLLKRWWTLVVAAAVVAVVAFGVSRLHGVFGSNIELSRPGTEAMENTNYNPKRVLLEVFGTAGSTATINF
LDEMAQPHRVDNAPLPWAHELVTNDPTLFADLRAQGTGDTTSCRITVDGIVKDERTVTIVNGYTTCLDKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 16638; Mature: 16638

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWALMQGWFWNLLKRWWTLVVAAAVVAVVAFGVSRLHGVFGSNIELSRPGTEAMENTNYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCC
PKRVLLEVFGTAGSTATINFLDEMAQPHRVDNAPLPWAHELVTNDPTLFADLRAQGTGDT
HHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCC
TSCRITVDGIVKDERTVTIVNGYTTCLDKSA
EEEEEEECCEECCCCEEEEECCHHHHCCCCC
>Mature Secondary Structure
MWALMQGWFWNLLKRWWTLVVAAAVVAVVAFGVSRLHGVFGSNIELSRPGTEAMENTNYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCC
PKRVLLEVFGTAGSTATINFLDEMAQPHRVDNAPLPWAHELVTNDPTLFADLRAQGTGDT
HHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCC
TSCRITVDGIVKDERTVTIVNGYTTCLDKSA
EEEEEEECCEECCCCEEEEECCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]