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The map label for this gene is paaD [H]

Identifier: 169628008

GI number: 169628008

Start: 901264

End: 901788

Strand: Direct

Name: paaD [H]

Synonym: MAB_0909

Alternate gene names: 169628008

Gene position: 901264-901788 (Clockwise)

Preceding gene: 169628007

Following gene: 169628009

Centisome position: 17.79

GC content: 64.95

Gene sequence:

>525_bases
ATGACGATGGTTCACCACGCGCCGGGCTCGGTCGCTCGCGCACGCGACATCGCTGCGGCGGTGACCGACCCTGAGATGCC
GATGCTGACCCTGGCCGACCTCGGGGTGTTGCGAGATATCCGGCAGGAAGAGGACGGCACTCTCATCGTGACCATCACAC
CGACCTACTCAGGTTGCCCGGCGATGGCCACCATGCGGGCCGATCTCGAACGTGCGCTTGCCCTCGCCGGATACCACCGG
GTGGAGGTGCGTACGGTCCTGGCGCCGGCCTGGACTTCGGACTGGATCACCGACGACGGTCGCCGCAAACTCGAAGAACA
CGGAATCGTCCCGGCACATGTGGTGGGCGACCGGCCTTCCGGGCCCATACCGCTGACCCTCGCCGCCAGCCGCCCGCTCG
TGCGGTGTCCGCAGTGCAAATCCCTCGAAACCGAAATGACGTCCGAATTCGGTTCGACCGCCTGCAAATCGCTGCACAGA
TGCATCCACTGCGGCGAACCATTCGACCGAATCAAGGAACTCTGA

Upstream 100 bases:

>100_bases
ATGGCAGGTCCGGCCGCGACGGCATCCACACCGAGGCGCTGAGCTATCTGCTGGCCGAGATGCAGTCGGTGGCCCGCGCG
CATCCCACCGCAACGTGGTG

Downstream 100 bases:

>100_bases
CATGACCACCGAATTGTCCGCGCCCACCACCGGACGCGGCATGCGCAACCGGCCGTTCCGCACGGTGCGGGTCGCCGAGG
TACAGCAGCTGTGCGCCGAT

Product: putative phenylacetic acid degradation protein PaaD/phenylacetate-CoA oxygenase, PaaJ subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTMVHHAPGSVARARDIAAAVTDPEMPMLTLADLGVLRDIRQEEDGTLIVTITPTYSGCPAMATMRADLERALALAGYHR
VEVRTVLAPAWTSDWITDDGRRKLEEHGIVPAHVVGDRPSGPIPLTLAASRPLVRCPQCKSLETEMTSEFGSTACKSLHR
CIHCGEPFDRIKEL

Sequences:

>Translated_174_residues
MTMVHHAPGSVARARDIAAAVTDPEMPMLTLADLGVLRDIRQEEDGTLIVTITPTYSGCPAMATMRADLERALALAGYHR
VEVRTVLAPAWTSDWITDDGRRKLEEHGIVPAHVVGDRPSGPIPLTLAASRPLVRCPQCKSLETEMTSEFGSTACKSLHR
CIHCGEPFDRIKEL
>Mature_173_residues
TMVHHAPGSVARARDIAAAVTDPEMPMLTLADLGVLRDIRQEEDGTLIVTITPTYSGCPAMATMRADLERALALAGYHRV
EVRTVLAPAWTSDWITDDGRRKLEEHGIVPAHVVGDRPSGPIPLTLAASRPLVRCPQCKSLETEMTSEFGSTACKSLHRC
IHCGEPFDRIKEL

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510939, Length=166, Percent_Identity=42.7710843373494, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744
- InterPro:   IPR011883 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 18995; Mature: 18864

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMVHHAPGSVARARDIAAAVTDPEMPMLTLADLGVLRDIRQEEDGTLIVTITPTYSGCP
CCEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
AMATMRADLERALALAGYHRVEVRTVLAPAWTSDWITDDGRRKLEEHGIVPAHVVGDRPS
HHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCC
GPIPLTLAASRPLVRCPQCKSLETEMTSEFGSTACKSLHRCIHCGEPFDRIKEL
CCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
TMVHHAPGSVARARDIAAAVTDPEMPMLTLADLGVLRDIRQEEDGTLIVTITPTYSGCP
CEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
AMATMRADLERALALAGYHRVEVRTVLAPAWTSDWITDDGRRKLEEHGIVPAHVVGDRPS
HHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCC
GPIPLTLAASRPLVRCPQCKSLETEMTSEFGSTACKSLHRCIHCGEPFDRIKEL
CCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]