Click here to switch to the map view.

The map label for this gene is paaC [H]

Identifier: 169628007

GI number: 169628007

Start: 900347

End: 901264

Strand: Direct

Name: paaC [H]

Synonym: MAB_0908

Alternate gene names: 169628007

Gene position: 900347-901264 (Clockwise)

Preceding gene: 169628006

Following gene: 169628008

Centisome position: 17.77

GC content: 65.69

Gene sequence:

>918_bases
ATGAATGATCACGACTCCGCTTTCGCCGGCCTCGTCGACGCCGACACACTTGACCAATGGGCGTTCGGCACTAGCTTTGA
CGATCCGCTCGCCGGGGTGGACACCACGTTGGCCGACGGTATCGATGCGACAGATCTGGCGACCTACTGCCTCATGCTCG
CCGATGATGCCTTGATCAGTGCGCAACGACTGACGCAGTGGTGCACCAATTCGCCCGAACTGGAGGAGGAGGTCGCGCTG
TCCAACATCGGTCTCGACCTGCTCGGTCAGGCCCGGCTGCTGTTGGCCCGGGCCGCGGCCGCCGACCCGGCGATTGTGCC
CACCTTGCCCGAAGGCTCGCCAGCGCCGGCCGAAGATGCGTTGGCATTCTTCAGGGACGAGCCGTTCTTTCGGTGCGTGC
GTTTGGTCGAGTTGGCGAACGGCGACTTCGCGCAGAGCATCGCCCGGCTGCTGGTGTTCTCGACTTATCGACTGGCGGTG
CTGGACCGGCTATGCGGGTCGCGCGATCCGGTGCTCGCGGCCGTCGCCGCGAAAGGCGTCAAAGAGCTGACGTATCACCG
TGACTACGCCGCGCGGTGGTTCATCACGCTCGCGGACGGCACCGACGAATCGCGGACCCGAATCGAGCACGCGGTCACGT
CGATATGGCCCTACGTCGACGAGTTGTTCACCGCTAACCCCGTTGAACAGCGATTGGCGGCGGTCGGCGCTGCCGTGGAT
TCGTCCACTTTGCGCACGGAGTTCGACAGCGTCGTCGAGCAGGTCCTGCGAGCGTCCGCTTTGCCTGTCCCGACGGCGCG
GCCGGTCATGGTGGTGGATGGCAGGTCCGGCCGCGACGGCATCCACACCGAGGCGCTGAGCTATCTGCTGGCCGAGATGC
AGTCGGTGGCCCGCGCGCATCCCACCGCAACGTGGTGA

Upstream 100 bases:

>100_bases
TCCGTTCTTCGCGCCCAGCGGCGACAAGGTGTATCGGCATCCCACCTTCTACGACATCCCCGATAACGTCCCTCACATGT
GAGACCGGAAGGCCATCACG

Downstream 100 bases:

>100_bases
TGACGATGGTTCACCACGCGCCGGGCTCGGTCGCTCGCGCACGCGACATCGCTGCGGCGGTGACCGACCCTGAGATGCCG
ATGCTGACCCTGGCCGACCT

Product: putative phenylacetic acid degradation protein PaaC/phenylacetate-CoA oxygenase, PaaI subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNDHDSAFAGLVDADTLDQWAFGTSFDDPLAGVDTTLADGIDATDLATYCLMLADDALISAQRLTQWCTNSPELEEEVAL
SNIGLDLLGQARLLLARAAAADPAIVPTLPEGSPAPAEDALAFFRDEPFFRCVRLVELANGDFAQSIARLLVFSTYRLAV
LDRLCGSRDPVLAAVAAKGVKELTYHRDYAARWFITLADGTDESRTRIEHAVTSIWPYVDELFTANPVEQRLAAVGAAVD
SSTLRTEFDSVVEQVLRASALPVPTARPVMVVDGRSGRDGIHTEALSYLLAEMQSVARAHPTATW

Sequences:

>Translated_305_residues
MNDHDSAFAGLVDADTLDQWAFGTSFDDPLAGVDTTLADGIDATDLATYCLMLADDALISAQRLTQWCTNSPELEEEVAL
SNIGLDLLGQARLLLARAAAADPAIVPTLPEGSPAPAEDALAFFRDEPFFRCVRLVELANGDFAQSIARLLVFSTYRLAV
LDRLCGSRDPVLAAVAAKGVKELTYHRDYAARWFITLADGTDESRTRIEHAVTSIWPYVDELFTANPVEQRLAAVGAAVD
SSTLRTEFDSVVEQVLRASALPVPTARPVMVVDGRSGRDGIHTEALSYLLAEMQSVARAHPTATW
>Mature_305_residues
MNDHDSAFAGLVDADTLDQWAFGTSFDDPLAGVDTTLADGIDATDLATYCLMLADDALISAQRLTQWCTNSPELEEEVAL
SNIGLDLLGQARLLLARAAAADPAIVPTLPEGSPAPAEDALAFFRDEPFFRCVRLVELANGDFAQSIARLLVFSTYRLAV
LDRLCGSRDPVLAAVAAKGVKELTYHRDYAARWFITLADGTDESRTRIEHAVTSIWPYVDELFTANPVEQRLAAVGAAVD
SSTLRTEFDSVVEQVLRASALPVPTARPVMVVDGRSGRDGIHTEALSYLLAEMQSVARAHPTATW

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG3396

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787656, Length=262, Percent_Identity=40.0763358778626, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011882
- InterPro:   IPR007814 [H]

Pfam domain/function: PF05138 PaaA_PaaC [H]

EC number: NA

Molecular weight: Translated: 32967; Mature: 32967

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDHDSAFAGLVDADTLDQWAFGTSFDDPLAGVDTTLADGIDATDLATYCLMLADDALIS
CCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
AQRLTQWCTNSPELEEEVALSNIGLDLLGQARLLLARAAAADPAIVPTLPEGSPAPAEDA
HHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHH
LAFFRDEPFFRCVRLVELANGDFAQSIARLLVFSTYRLAVLDRLCGSRDPVLAAVAAKGV
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KELTYHRDYAARWFITLADGTDESRTRIEHAVTSIWPYVDELFTANPVEQRLAAVGAAVD
HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SSTLRTEFDSVVEQVLRASALPVPTARPVMVVDGRSGRDGIHTEALSYLLAEMQSVARAH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
PTATW
CCCCC
>Mature Secondary Structure
MNDHDSAFAGLVDADTLDQWAFGTSFDDPLAGVDTTLADGIDATDLATYCLMLADDALIS
CCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
AQRLTQWCTNSPELEEEVALSNIGLDLLGQARLLLARAAAADPAIVPTLPEGSPAPAEDA
HHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHH
LAFFRDEPFFRCVRLVELANGDFAQSIARLLVFSTYRLAVLDRLCGSRDPVLAAVAAKGV
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KELTYHRDYAARWFITLADGTDESRTRIEHAVTSIWPYVDELFTANPVEQRLAAVGAAVD
HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SSTLRTEFDSVVEQVLRASALPVPTARPVMVVDGRSGRDGIHTEALSYLLAEMQSVARAH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
PTATW
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]