| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627988
Identifier: 169627988
GI number: 169627988
Start: 881811
End: 882674
Strand: Reverse
Name: 169627988
Synonym: MAB_0889c
Alternate gene names: NA
Gene position: 882674-881811 (Counterclockwise)
Preceding gene: 169627989
Following gene: 169627987
Centisome position: 17.42
GC content: 64.24
Gene sequence:
>864_bases ATGATCTTTAGCCGATTGTTCGACGACGCCGCGCTGTTTCCCCCAGGAAACGCCCCAACCGACAGTGCGGTCCCAGCCCA TCGCGCCCATCTCGATGCCACCTACGCCGACTACGTCGGGCCGTTCATCGCTCCGGTAGGTGCTGTCCGCACCATCGCCG CCCTCACCCGCGCGGCTGCACCCGAAACGCCGATGCCGGTGAGTCTCACCTCGACGGGTCATCTCCAACAACTCGGCGAA ACCATCTGCAGTGCCATGGATTACCGAGATCTGAACATCGTCAGTGTCGAGGTAGCCATGGCCGAATCGGATAGTGCCGC GGTCGCAACCACACTGCTGGATTCGGCGATTCCCGACAACATCTCGGTCTTCCTCGAAGTCCCCCGCGATGCACGCCGCG CCGATGCGTTATCGGCGCTGGCAGGCCGCCGCATTCACGCAAAATTCCGCACGGGCGGACTCACGAAAGCCGCGTACCCC GACGAGCACGAACTCGCCGCGGCGATACACCACTGCGTGCGTGCCGGCATCGCCTTCAAGGCGACTGCCGGGCTCCATCA CGCCACCCGCAACACCAACCCGACAACAGGTTTCGAGCAACACGGCTTCCTCAACATCATCGCCGCCGTGCACGGCGCCC ACCACGGCGCTAGCGCGGCCGATCTCGCCGCAATCCTGGCCTCGCGCGACGCGTACGGACTGGCCGACACGATCTCGGCG CTGACCCCGAAGGACGTGGCGCTGGTCCGACACACATTCCTGTCCTTCGGAACCTGCAGCATCATCGAACCACTCGAGGA CCTCCTCGGACTCGGGCTGATCACCGCCGACGTGCTGTCACCATCGCAAGGGATAAACCTGTGA
Upstream 100 bases:
>100_bases TGGTGGACACGTTCCGGCCACTGGAACTCGGTGAGGCGGCCCTAGCCTGCGACGATTCCACCTATGCGTGGAGTTGGGCG GGAAGGCGGCTGTCGCGCAC
Downstream 100 bases:
>100_bases ATCTGCGCGACTCCATCGACCATCCGTTGTTCGGCATCACCAATCTGCCCTACGGAGTGTTCTCACCCCCTGATGGCACT CCCCGAGTCGGAGTGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MIFSRLFDDAALFPPGNAPTDSAVPAHRAHLDATYADYVGPFIAPVGAVRTIAALTRAAAPETPMPVSLTSTGHLQQLGE TICSAMDYRDLNIVSVEVAMAESDSAAVATTLLDSAIPDNISVFLEVPRDARRADALSALAGRRIHAKFRTGGLTKAAYP DEHELAAAIHHCVRAGIAFKATAGLHHATRNTNPTTGFEQHGFLNIIAAVHGAHHGASAADLAAILASRDAYGLADTISA LTPKDVALVRHTFLSFGTCSIIEPLEDLLGLGLITADVLSPSQGINL
Sequences:
>Translated_287_residues MIFSRLFDDAALFPPGNAPTDSAVPAHRAHLDATYADYVGPFIAPVGAVRTIAALTRAAAPETPMPVSLTSTGHLQQLGE TICSAMDYRDLNIVSVEVAMAESDSAAVATTLLDSAIPDNISVFLEVPRDARRADALSALAGRRIHAKFRTGGLTKAAYP DEHELAAAIHHCVRAGIAFKATAGLHHATRNTNPTTGFEQHGFLNIIAAVHGAHHGASAADLAAILASRDAYGLADTISA LTPKDVALVRHTFLSFGTCSIIEPLEDLLGLGLITADVLSPSQGINL >Mature_287_residues MIFSRLFDDAALFPPGNAPTDSAVPAHRAHLDATYADYVGPFIAPVGAVRTIAALTRAAAPETPMPVSLTSTGHLQQLGE TICSAMDYRDLNIVSVEVAMAESDSAAVATTLLDSAIPDNISVFLEVPRDARRADALSALAGRRIHAKFRTGGLTKAAYP DEHELAAAIHHCVRAGIAFKATAGLHHATRNTNPTTGFEQHGFLNIIAAVHGAHHGASAADLAAILASRDAYGLADTISA LTPKDVALVRHTFLSFGTCSIIEPLEDLLGLGLITADVLSPSQGINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29995; Mature: 29995
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFSRLFDDAALFPPGNAPTDSAVPAHRAHLDATYADYVGPFIAPVGAVRTIAALTRAAA CCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PETPMPVSLTSTGHLQQLGETICSAMDYRDLNIVSVEVAMAESDSAAVATTLLDSAIPDN CCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCC ISVFLEVPRDARRADALSALAGRRIHAKFRTGGLTKAAYPDEHELAAAIHHCVRAGIAFK EEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHE ATAGLHHATRNTNPTTGFEQHGFLNIIAAVHGAHHGASAADLAAILASRDAYGLADTISA ECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHH LTPKDVALVRHTFLSFGTCSIIEPLEDLLGLGLITADVLSPSQGINL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIFSRLFDDAALFPPGNAPTDSAVPAHRAHLDATYADYVGPFIAPVGAVRTIAALTRAAA CCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PETPMPVSLTSTGHLQQLGETICSAMDYRDLNIVSVEVAMAESDSAAVATTLLDSAIPDN CCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCC ISVFLEVPRDARRADALSALAGRRIHAKFRTGGLTKAAYPDEHELAAAIHHCVRAGIAFK EEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHE ATAGLHHATRNTNPTTGFEQHGFLNIIAAVHGAHHGASAADLAAILASRDAYGLADTISA ECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHH LTPKDVALVRHTFLSFGTCSIIEPLEDLLGLGLITADVLSPSQGINL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA