| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627987
Identifier: 169627987
GI number: 169627987
Start: 880639
End: 881814
Strand: Reverse
Name: 169627987
Synonym: MAB_0888c
Alternate gene names: NA
Gene position: 881814-880639 (Counterclockwise)
Preceding gene: 169627988
Following gene: 169627986
Centisome position: 17.4
GC content: 63.18
Gene sequence:
>1176_bases GTGAATCTGCGCGACTCCATCGACCATCCGTTGTTCGGCATCACCAATCTGCCCTACGGAGTGTTCTCACCCCCTGATGG CACTCCCCGAGTCGGAGTGCGGATCGGCGACCATGTCATCGACCTGGCCGCTGCGCTCTACGATCCCGTCTTCGACAATG CCACCCTGAATCCCTTTATGGCTGAAGGTGCTACACGCTGGGCAGCGGTCCGGCGCGCAATCACCGAGCTCATTCGAGAA GGCACTGTCCCCCCGCCGGCGATCCACCGGCTGAGCGGAGTCACGCTTCACCTTCCCTTTGCAGTGGCCGACTATGTCGA CTTCTATGCATCTGAGCATCACGCCTCCAACCTCGGCCGCCTATTTCGACCCGACTCCGAACCGCTGTTGCCGAACTGGA AACACCTGCCGGTCGGCTACCATGGCCGCGCTGGGACGGTCGTGGTATCCGGAACACCCATCGTGCGGCCCAGCGGCCAA CGCCGCGCCGCCGACCAAGCACAGCCCGAGTTCGGGCCCAGCACCCGCCTGGATATCGAAGCCGAAGTAGGTTTCGTCGT CGGTACCGGATCACCTCTGGGACAACCGATATCGGTCGACGACTTCGCCACACACGTCTTCGGCGCGGTCCTGGTCAACG ACTGGTCGGCGCGAGACTTGCAGGCATGGGAGTACGTCCCGCTGGGCCCCTTCCTCGGAAAAAGCTTCGCGACAACCATT TCGGCCTGGGTGGTGCCCCTTGCGGCGCTGGAATCGGCACGCATTCATCGCCCACCACAGCAGCCCCAGCCACTCGCCTA CCTCCGCGAGCGCGAATCGTGGTTTCTCGACATCGACATCTCGGTTTCCTGGAACGGCTGCGCGGTAGCACGGCCACCGT ATGCAGAGATGTACTGGTCGCCCGCGCAGATGCTGGCCCACACCACCGTCAACGGTGCCGCTGCACGAACCGGCGACCTA TTCGCATCCGGCACCGTGTCCGGTCCTCAGAAACACCAACGCGGATCGTTCATCGAATTGTCCTGGGGTGGAAACGAACC CATCAGCATTGGCGAGCACAGGCGCATCTTCCTAGAAGACGGCGATGACGTGGTGATCACCGCGGTGGCGCCCGGCCCCC AGGGAACCCACATCGGATTCGGCGAAGTAGCAGGACGCATCATCGGACACCGCTGA
Upstream 100 bases:
>100_bases TGTCCTTCGGAACCTGCAGCATCATCGAACCACTCGAGGACCTCCTCGGACTCGGGCTGATCACCGCCGACGTGCTGTCA CCATCGCAAGGGATAAACCT
Downstream 100 bases:
>100_bases GCACTCGGCCGTCACGATTCACCACTCACGCCACGTCACCATTGTCGTGCCCGCCATAGCTCAGCCGACAGCGACAGGTT GCGCTTGAGTAGCTCCCCAC
Product: putative fumarylacetoacetase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNLRDSIDHPLFGITNLPYGVFSPPDGTPRVGVRIGDHVIDLAAALYDPVFDNATLNPFMAEGATRWAAVRRAITELIRE GTVPPPAIHRLSGVTLHLPFAVADYVDFYASEHHASNLGRLFRPDSEPLLPNWKHLPVGYHGRAGTVVVSGTPIVRPSGQ RRAADQAQPEFGPSTRLDIEAEVGFVVGTGSPLGQPISVDDFATHVFGAVLVNDWSARDLQAWEYVPLGPFLGKSFATTI SAWVVPLAALESARIHRPPQQPQPLAYLRERESWFLDIDISVSWNGCAVARPPYAEMYWSPAQMLAHTTVNGAAARTGDL FASGTVSGPQKHQRGSFIELSWGGNEPISIGEHRRIFLEDGDDVVITAVAPGPQGTHIGFGEVAGRIIGHR
Sequences:
>Translated_391_residues MNLRDSIDHPLFGITNLPYGVFSPPDGTPRVGVRIGDHVIDLAAALYDPVFDNATLNPFMAEGATRWAAVRRAITELIRE GTVPPPAIHRLSGVTLHLPFAVADYVDFYASEHHASNLGRLFRPDSEPLLPNWKHLPVGYHGRAGTVVVSGTPIVRPSGQ RRAADQAQPEFGPSTRLDIEAEVGFVVGTGSPLGQPISVDDFATHVFGAVLVNDWSARDLQAWEYVPLGPFLGKSFATTI SAWVVPLAALESARIHRPPQQPQPLAYLRERESWFLDIDISVSWNGCAVARPPYAEMYWSPAQMLAHTTVNGAAARTGDL FASGTVSGPQKHQRGSFIELSWGGNEPISIGEHRRIFLEDGDDVVITAVAPGPQGTHIGFGEVAGRIIGHR >Mature_391_residues MNLRDSIDHPLFGITNLPYGVFSPPDGTPRVGVRIGDHVIDLAAALYDPVFDNATLNPFMAEGATRWAAVRRAITELIRE GTVPPPAIHRLSGVTLHLPFAVADYVDFYASEHHASNLGRLFRPDSEPLLPNWKHLPVGYHGRAGTVVVSGTPIVRPSGQ RRAADQAQPEFGPSTRLDIEAEVGFVVGTGSPLGQPISVDDFATHVFGAVLVNDWSARDLQAWEYVPLGPFLGKSFATTI SAWVVPLAALESARIHRPPQQPQPLAYLRERESWFLDIDISVSWNGCAVARPPYAEMYWSPAQMLAHTTVNGAAARTGDL FASGTVSGPQKHQRGSFIELSWGGNEPISIGEHRRIFLEDGDDVVITAVAPGPQGTHIGFGEVAGRIIGHR
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=403, Percent_Identity=46.4019851116625, Blast_Score=353, Evalue=2e-97, Organism=Caenorhabditis elegans, GI17568863, Length=403, Percent_Identity=45.9057071960298, Blast_Score=332, Evalue=2e-91, Organism=Drosophila melanogaster, GI24657182, Length=398, Percent_Identity=43.21608040201, Blast_Score=312, Evalue=3e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42382; Mature: 42382
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRDSIDHPLFGITNLPYGVFSPPDGTPRVGVRIGDHVIDLAAALYDPVFDNATLNPFM CCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHH AEGATRWAAVRRAITELIREGTVPPPAIHRLSGVTLHLPFAVADYVDFYASEHHASNLGR HCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHH LFRPDSEPLLPNWKHLPVGYHGRAGTVVVSGTPIVRPSGQRRAADQAQPEFGPSTRLDIE HCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCHHCCCCCCCCCEEEEE AEVGFVVGTGSPLGQPISVDDFATHVFGAVLVNDWSARDLQAWEYVPLGPFLGKSFATTI EEEEEEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCEEEEECCHHHHHHHHHHH SAWVVPLAALESARIHRPPQQPQPLAYLRERESWFLDIDISVSWNGCAVARPPYAEMYWS HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCEEECCCCHHHHHCC PAQMLAHTTVNGAAARTGDLFASGTVSGPQKHQRGSFIELSWGGNEPISIGEHRRIFLED HHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCEEEEEC GDDVVITAVAPGPQGTHIGFGEVAGRIIGHR CCCEEEEEECCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNLRDSIDHPLFGITNLPYGVFSPPDGTPRVGVRIGDHVIDLAAALYDPVFDNATLNPFM CCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHH AEGATRWAAVRRAITELIREGTVPPPAIHRLSGVTLHLPFAVADYVDFYASEHHASNLGR HCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHH LFRPDSEPLLPNWKHLPVGYHGRAGTVVVSGTPIVRPSGQRRAADQAQPEFGPSTRLDIE HCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCHHCCCCCCCCCEEEEE AEVGFVVGTGSPLGQPISVDDFATHVFGAVLVNDWSARDLQAWEYVPLGPFLGKSFATTI EEEEEEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCEEEEECCHHHHHHHHHHH SAWVVPLAALESARIHRPPQQPQPLAYLRERESWFLDIDISVSWNGCAVARPPYAEMYWS HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCEEECCCCHHHHHCC PAQMLAHTTVNGAAARTGDLFASGTVSGPQKHQRGSFIELSWGGNEPISIGEHRRIFLED HHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCEEEEEC GDDVVITAVAPGPQGTHIGFGEVAGRIIGHR CCCEEEEEECCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA