| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627519
Identifier: 169627519
GI number: 169627519
Start: 415647
End: 416492
Strand: Direct
Name: 169627519
Synonym: MAB_0415
Alternate gene names: NA
Gene position: 415647-416492 (Clockwise)
Preceding gene: 169627518
Following gene: 169627522
Centisome position: 8.2
GC content: 66.78
Gene sequence:
>846_bases GTGAACTCGATTCCCCTTGCCCTCGCGGGCTCACTGAGCTGGGGCATCAGTGACTTCATCGGCGGGCATGCGAGCAAGCG GCGGTCGACCCTGGCAGTACTCGCGTTGAGTCGGCCCGTCGGGCTGGCGGTGGTCGGGCTGGTGTCCGTGCTCACCGCCT CCACGCATTTCGATGGCCGCACCCTACTCGGAATGCTTTCCGGTCCAGCCGCTTTCGCGGCTCTGTACGCGCTGTATCGC GCCCTTGCGATTGGGCCGATGGGTGTGGTGTCACCGATTGCGGCGGTCGGTGCGGTGGTACCGGTGCTGTGGGGCACCGT GATCGGGCAGTCGCTCGCGGGCCTGACGTATCTGGGGTTGGGCGGCACCCTCGTCGGGGTCATGCTGGCCTCGGCCTCCG AAGGACTCGACGGGCAGCGGCCGGGACGACAGGTGCTGGTGTGGTCGTTCTTCTGCATGGTGATGTTCGGGATCTGCATG ATCCTGCTGGCCGAGGCCGGTAGGTATCACCCCGTGGAGGCGGTGGTGGTCTCCCGCGCTACCGAGGTCGTGCTGATCCT GATACTCGGGGCGCTGAGCTGGAACAACCTGCGCGAAAACCTGCGTCCACCGTTCGGGGTGGTGCCCTTCGCCGGTGTGC TCGACACCTCGGCCATGCTGCTGTTCGCCTACGCCGCCGGGCACGGCAGCCTGGCTGTCGCCGCCGTGCTGTCCTCGCTA TACCCGGTGGTGACGGTCCTCATCGCCCGGTTGGTACTTCATGAGCGCCTCAGCAGGGTTCAACAGACCGGTGCGGTGCT GACGCTTGTGTGCGTAGCTGTCGTGGTGTTCAGCGCGGCGCGCTGA
Upstream 100 bases:
>100_bases TGTCGAATTCGTGTACACCGATGTGGACCCGTCGCTGTGGGGTGCGGCCGAATGGTCGGTCCAGGCGCAACTGGACTACC TGCGTACTGTTTAGCCAGCG
Downstream 100 bases:
>100_bases CATACACGGGAAATCAACGCGCGCGGCGTGCCAGACGCTCGGAGTCCGAGATCAGGACGCTCTTGCCCTCCAGGCGGATC CAGCCGCGGTGCGCGAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNSIPLALAGSLSWGISDFIGGHASKRRSTLAVLALSRPVGLAVVGLVSVLTASTHFDGRTLLGMLSGPAAFAALYALYR ALAIGPMGVVSPIAAVGAVVPVLWGTVIGQSLAGLTYLGLGGTLVGVMLASASEGLDGQRPGRQVLVWSFFCMVMFGICM ILLAEAGRYHPVEAVVVSRATEVVLILILGALSWNNLRENLRPPFGVVPFAGVLDTSAMLLFAYAAGHGSLAVAAVLSSL YPVVTVLIARLVLHERLSRVQQTGAVLTLVCVAVVVFSAAR
Sequences:
>Translated_281_residues MNSIPLALAGSLSWGISDFIGGHASKRRSTLAVLALSRPVGLAVVGLVSVLTASTHFDGRTLLGMLSGPAAFAALYALYR ALAIGPMGVVSPIAAVGAVVPVLWGTVIGQSLAGLTYLGLGGTLVGVMLASASEGLDGQRPGRQVLVWSFFCMVMFGICM ILLAEAGRYHPVEAVVVSRATEVVLILILGALSWNNLRENLRPPFGVVPFAGVLDTSAMLLFAYAAGHGSLAVAAVLSSL YPVVTVLIARLVLHERLSRVQQTGAVLTLVCVAVVVFSAAR >Mature_281_residues MNSIPLALAGSLSWGISDFIGGHASKRRSTLAVLALSRPVGLAVVGLVSVLTASTHFDGRTLLGMLSGPAAFAALYALYR ALAIGPMGVVSPIAAVGAVVPVLWGTVIGQSLAGLTYLGLGGTLVGVMLASASEGLDGQRPGRQVLVWSFFCMVMFGICM ILLAEAGRYHPVEAVVVSRATEVVLILILGALSWNNLRENLRPPFGVVPFAGVLDTSAMLLFAYAAGHGSLAVAAVLSSL YPVVTVLIARLVLHERLSRVQQTGAVLTLVCVAVVVFSAAR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29045; Mature: 29045
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIPLALAGSLSWGISDFIGGHASKRRSTLAVLALSRPVGLAVVGLVSVLTASTHFDGR CCCCCCCEECCHHHCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH TLLGMLSGPAAFAALYALYRALAIGPMGVVSPIAAVGAVVPVLWGTVIGQSLAGLTYLGL HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGTLVGVMLASASEGLDGQRPGRQVLVWSFFCMVMFGICMILLAEAGRYHPVEAVVVSRA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TEVVLILILGALSWNNLRENLRPPFGVVPFAGVLDTSAMLLFAYAAGHGSLAVAAVLSSL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YPVVTVLIARLVLHERLSRVQQTGAVLTLVCVAVVVFSAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSIPLALAGSLSWGISDFIGGHASKRRSTLAVLALSRPVGLAVVGLVSVLTASTHFDGR CCCCCCCEECCHHHCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH TLLGMLSGPAAFAALYALYRALAIGPMGVVSPIAAVGAVVPVLWGTVIGQSLAGLTYLGL HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGTLVGVMLASASEGLDGQRPGRQVLVWSFFCMVMFGICMILLAEAGRYHPVEAVVVSRA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TEVVLILILGALSWNNLRENLRPPFGVVPFAGVLDTSAMLLFAYAAGHGSLAVAAVLSSL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YPVVTVLIARLVLHERLSRVQQTGAVLTLVCVAVVVFSAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA